EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000003552 (Gene tree)
Gene ID: 108441219
Gene Symbol: si:ch211-256m1.8
Alias: -
Full Name: uncharacterized LOC108441219
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 6128 bases
Position: chrKV575678.1:603274-609401
Accession: 108441219
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000031434	tRNA-synt_2	PF00152.20	1.2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000020396	-	4744	XM_017720634	ENSPNAP00000031434	1580 (aa)	XP_017576123	UPI0008149457

Gene Model

Click here to download ENSPNAG00000003552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000003552's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000003552	si:ch211-256m1.8	100	94.430	ENSPNAG00000018965	-	99	94.430

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000003552	si:ch211-256m1.8	99	66.079	ENSAPOG00000007012	si:ch211-256m1.8	99	66.016	Acanthochromis_polyacanthus
ENSPNAG00000003552	si:ch211-256m1.8	99	66.291	ENSAOCG00000012258	si:ch211-256m1.8	99	66.291	Amphiprion_ocellaris
ENSPNAG00000003552	si:ch211-256m1.8	99	66.165	ENSAPEG00000002724	si:ch211-256m1.8	99	66.165	Amphiprion_percula
ENSPNAG00000003552	si:ch211-256m1.8	99	68.719	ENSATEG00000006278	si:ch211-256m1.8	99	68.656	Anabas_testudineus
ENSPNAG00000003552	si:ch211-256m1.8	99	66.875	ENSACLG00000011503	si:ch211-256m1.8	99	67.085	Astatotilapia_calliptera
ENSPNAG00000003552	si:ch211-256m1.8	99	86.013	ENSAMXG00000038245	si:ch211-256m1.8	99	86.013	Astyanax_mexicanus
ENSPNAG00000003552	si:ch211-256m1.8	99	67.043	ENSCSEG00000006255	si:ch211-256m1.8	99	67.043	Cynoglossus_semilaevis
ENSPNAG00000003552	si:ch211-256m1.8	99	67.774	ENSCVAG00000003376	si:ch211-256m1.8	99	67.649	Cyprinodon_variegatus
ENSPNAG00000003552	si:ch211-256m1.8	99	74.811	ENSDARG00000055172	si:ch211-256m1.8	99	74.591	Danio_rerio
ENSPNAG00000003552	si:ch211-256m1.8	99	69.756	ENSELUG00000010546	si:ch211-256m1.8	99	69.756	Esox_lucius
ENSPNAG00000003552	si:ch211-256m1.8	99	66.750	ENSFHEG00000005847	si:ch211-256m1.8	99	67.507	Fundulus_heteroclitus
ENSPNAG00000003552	si:ch211-256m1.8	99	67.315	ENSGAFG00000010269	si:ch211-256m1.8	99	67.420	Gambusia_affinis
ENSPNAG00000003552	si:ch211-256m1.8	99	67.001	ENSHBUG00000014407	si:ch211-256m1.8	99	67.211	Haplochromis_burtoni
ENSPNAG00000003552	si:ch211-256m1.8	99	64.362	ENSHCOG00000006884	si:ch211-256m1.8	100	65.934	Hippocampus_comes
ENSPNAG00000003552	si:ch211-256m1.8	99	78.947	ENSIPUG00000022659	si:ch211-256m1.8	99	78.748	Ictalurus_punctatus
ENSPNAG00000003552	si:ch211-256m1.8	99	68.405	ENSKMAG00000016377	si:ch211-256m1.8	99	68.193	Kryptolebias_marmoratus
ENSPNAG00000003552	si:ch211-256m1.8	99	68.510	ENSLBEG00000010639	si:ch211-256m1.8	99	68.230	Labrus_bergylta
ENSPNAG00000003552	si:ch211-256m1.8	99	61.049	ENSLOCG00000011127	si:ch211-256m1.8	99	60.802	Lepisosteus_oculatus
ENSPNAG00000003552	si:ch211-256m1.8	99	67.274	ENSMAMG00000005651	si:ch211-256m1.8	99	67.274	Mastacembelus_armatus
ENSPNAG00000003552	si:ch211-256m1.8	99	66.938	ENSMZEG00005006924	si:ch211-256m1.8	99	67.148	Maylandia_zebra
ENSPNAG00000003552	si:ch211-256m1.8	99	64.528	ENSMMOG00000001736	si:ch211-256m1.8	99	64.268	Mola_mola
ENSPNAG00000003552	si:ch211-256m1.8	99	66.875	ENSNBRG00000005143	si:ch211-256m1.8	99	67.085	Neolamprologus_brichardi
ENSPNAG00000003552	si:ch211-256m1.8	99	66.352	ENSORLG00000022248	si:ch211-256m1.8	99	66.289	Oryzias_latipes
ENSPNAG00000003552	si:ch211-256m1.8	99	66.037	ENSORLG00020000214	si:ch211-256m1.8	99	65.975	Oryzias_latipes_hni
ENSPNAG00000003552	si:ch211-256m1.8	99	65.909	ENSORLG00015020297	si:ch211-256m1.8	99	66.499	Oryzias_latipes_hsok
ENSPNAG00000003552	si:ch211-256m1.8	99	65.639	ENSOMEG00000004519	si:ch211-256m1.8	99	66.045	Oryzias_melastigma
ENSPNAG00000003552	si:ch211-256m1.8	96	69.131	ENSPKIG00000007399	si:ch211-256m1.8	99	68.968	Paramormyrops_kingsleyae
ENSPNAG00000003552	si:ch211-256m1.8	99	60.768	ENSPMGG00000007698	si:ch211-256m1.8	99	60.793	Periophthalmus_magnuspinnatus
ENSPNAG00000003552	si:ch211-256m1.8	99	67.693	ENSPFOG00000005178	si:ch211-256m1.8	99	67.693	Poecilia_formosa
ENSPNAG00000003552	si:ch211-256m1.8	99	67.714	ENSPLAG00000006872	si:ch211-256m1.8	99	67.714	Poecilia_latipinna
ENSPNAG00000003552	si:ch211-256m1.8	99	67.819	ENSPMEG00000021815	si:ch211-256m1.8	99	67.819	Poecilia_mexicana
ENSPNAG00000003552	si:ch211-256m1.8	99	67.965	ENSPREG00000018669	si:ch211-256m1.8	99	67.902	Poecilia_reticulata
ENSPNAG00000003552	si:ch211-256m1.8	99	66.688	ENSPNYG00000018038	si:ch211-256m1.8	99	66.897	Pundamilia_nyererei
ENSPNAG00000003552	si:ch211-256m1.8	100	67.188	ENSSFOG00015008344	si:ch211-256m1.8	100	67.022	Scleropages_formosus
ENSPNAG00000003552	si:ch211-256m1.8	99	67.797	ENSSMAG00000007562	si:ch211-256m1.8	99	67.734	Scophthalmus_maximus
ENSPNAG00000003552	si:ch211-256m1.8	99	70.189	ENSSDUG00000018180	si:ch211-256m1.8	99	70.189	Seriola_dumerili
ENSPNAG00000003552	si:ch211-256m1.8	99	69.950	ENSSLDG00000020310	si:ch211-256m1.8	99	69.950	Seriola_lalandi_dorsalis
ENSPNAG00000003552	si:ch211-256m1.8	99	66.646	ENSSPAG00000013419	si:ch211-256m1.8	99	66.646	Stegastes_partitus
ENSPNAG00000003552	si:ch211-256m1.8	99	60.503	ENSTRUG00000023803	si:ch211-256m1.8	99	60.351	Takifugu_rubripes
ENSPNAG00000003552	si:ch211-256m1.8	99	67.630	ENSXCOG00000017726	si:ch211-256m1.8	99	67.630	Xiphophorus_couchianus
ENSPNAG00000003552	si:ch211-256m1.8	99	67.442	ENSXMAG00000026576	si:ch211-256m1.8	99	67.401	Xiphophorus_maculatus