EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000003616 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-7l6.3
Alias: -
Full Name: zinc finger protein 235-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 1412 bases
Position: chrKV575346.1:2804920-2806331
Accession: 108428322
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000013994	zf-C2H2	PF00096.26	1.3e-14	1	3
ENSPNAP00000013994	zf-C2H2	PF00096.26	1.3e-14	2	3
ENSPNAP00000013994	zf-C2H2	PF00096.26	1.3e-14	3	3
ENSPNAP00000013994	zf-met	PF12874.7	0.00042	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000021759	-	1152	XM_017699237	ENSPNAP00000013994	383 (aa)	XP_017554726	-

Gene Model

Click here to download ENSPNAG00000003616's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000003616's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000003616	si:dkey-7l6.3	60	56.627	ENSPNAG00000000783	-	92	56.098
ENSPNAG00000003616	si:dkey-7l6.3	59	51.282	ENSPNAG00000016478	-	98	51.282
ENSPNAG00000003616	si:dkey-7l6.3	99	32.093	ENSPNAG00000019887	-	92	32.629
ENSPNAG00000003616	si:dkey-7l6.3	50	51.220	ENSPNAG00000007265	-	85	51.220
ENSPNAG00000003616	si:dkey-7l6.3	50	53.571	ENSPNAG00000003702	-	82	55.000
ENSPNAG00000003616	si:dkey-7l6.3	97	45.570	ENSPNAG00000017189	-	97	45.570

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000003616	si:dkey-7l6.3	96	42.857	ENSATEG00000007658	-	62	48.052	Anabas_testudineus
ENSPNAG00000003616	si:dkey-7l6.3	99	76.154	ENSAMXG00000019757	si:dkey-7l6.3	100	77.494	Astyanax_mexicanus
ENSPNAG00000003616	si:dkey-7l6.3	99	57.314	ENSDARG00000094514	si:dkey-7l6.3	95	56.835	Danio_rerio
ENSPNAG00000003616	si:dkey-7l6.3	67	48.052	ENSHBUG00000007316	-	79	48.052	Haplochromis_burtoni
ENSPNAG00000003616	si:dkey-7l6.3	50	49.398	ENSHCOG00000015355	-	85	50.000	Hippocampus_comes
ENSPNAG00000003616	si:dkey-7l6.3	99	72.727	ENSIPUG00000014394	si:dkey-7l6.3	100	72.727	Ictalurus_punctatus
ENSPNAG00000003616	si:dkey-7l6.3	58	41.772	ENSORLG00000027366	-	74	43.860	Oryzias_latipes
ENSPNAG00000003616	si:dkey-7l6.3	56	30.682	ENSORLG00000028381	-	88	45.455	Oryzias_latipes
ENSPNAG00000003616	si:dkey-7l6.3	50	43.210	ENSORLG00000001796	-	88	50.847	Oryzias_latipes
ENSPNAG00000003616	si:dkey-7l6.3	55	44.578	ENSORLG00000001749	-	91	48.077	Oryzias_latipes
ENSPNAG00000003616	si:dkey-7l6.3	58	44.304	ENSORLG00020010636	-	73	44.304	Oryzias_latipes_hni
ENSPNAG00000003616	si:dkey-7l6.3	62	42.623	ENSOMEG00000013244	-	80	45.570	Oryzias_melastigma
ENSPNAG00000003616	si:dkey-7l6.3	50	36.735	ENSOMEG00000010744	-	54	42.593	Oryzias_melastigma
ENSPNAG00000003616	si:dkey-7l6.3	50	43.939	ENSOMEG00000000196	-	88	45.161	Oryzias_melastigma
ENSPNAG00000003616	si:dkey-7l6.3	74	44.578	ENSOMEG00000017797	-	68	45.570	Oryzias_melastigma
ENSPNAG00000003616	si:dkey-7l6.3	50	51.786	ENSPMEG00000013952	-	91	50.909	Poecilia_mexicana
ENSPNAG00000003616	si:dkey-7l6.3	56	52.113	ENSPNYG00000005202	-	93	50.943	Pundamilia_nyererei