EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000003770 (Gene tree)
Gene ID: 108438890
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 22775 bases
Position: chrKV575573.1:237878-260652
Accession: 108438890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000034312	tRNA_int_end_N2	PF12928.7	8.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000025956	-	3218	XM_017716994	ENSPNAP00000034312	522 (aa)	XP_017572483	UPI0008148C5A

Gene Model

Click here to download ENSPNAG00000003770's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000003770's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000003770	tsen54	81	57.949	ENSG00000182173	TSEN54	100	69.444	Homo_sapiens
ENSPNAG00000003770	tsen54	97	57.339	ENSAPOG00000009659	tsen54	99	55.634	Acanthochromis_polyacanthus
ENSPNAG00000003770	tsen54	95	45.577	ENSAMEG00000009414	TSEN54	96	46.680	Ailuropoda_melanoleuca
ENSPNAG00000003770	tsen54	97	58.203	ENSAOCG00000000152	tsen54	95	58.203	Amphiprion_ocellaris
ENSPNAG00000003770	tsen54	97	57.422	ENSAPEG00000018931	tsen54	95	57.422	Amphiprion_percula
ENSPNAG00000003770	tsen54	98	55.106	ENSATEG00000019860	tsen54	98	55.192	Anabas_testudineus
ENSPNAG00000003770	tsen54	86	46.389	ENSAPLG00000009419	TSEN54	99	46.389	Anas_platyrhynchos
ENSPNAG00000003770	tsen54	96	46.542	ENSACAG00000006714	TSEN54	97	48.242	Anolis_carolinensis
ENSPNAG00000003770	tsen54	98	44.297	ENSANAG00000024061	TSEN54	97	44.465	Aotus_nancymaae
ENSPNAG00000003770	tsen54	98	54.826	ENSACLG00000019800	tsen54	98	54.808	Astatotilapia_calliptera
ENSPNAG00000003770	tsen54	100	74.138	ENSAMXG00000006546	tsen54	100	74.138	Astyanax_mexicanus
ENSPNAG00000003770	tsen54	79	62.162	ENSBTAG00000000824	TSEN54	99	45.149	Bos_taurus
ENSPNAG00000003770	tsen54	98	44.297	ENSCJAG00000014278	TSEN54	97	44.465	Callithrix_jacchus
ENSPNAG00000003770	tsen54	98	44.790	ENSCAFG00000004798	TSEN54	98	45.607	Canis_familiaris
ENSPNAG00000003770	tsen54	98	44.790	ENSCAFG00020000312	TSEN54	98	45.607	Canis_lupus_dingo
ENSPNAG00000003770	tsen54	99	44.717	ENSCHIG00000019908	TSEN54	99	45.247	Capra_hircus
ENSPNAG00000003770	tsen54	86	44.000	ENSTSYG00000037439	TSEN54	99	45.553	Carlito_syrichta
ENSPNAG00000003770	tsen54	98	44.090	ENSCCAG00000036624	TSEN54	97	44.653	Cebus_capucinus
ENSPNAG00000003770	tsen54	96	44.874	ENSCATG00000042877	TSEN54	97	44.802	Cercocebus_atys
ENSPNAG00000003770	tsen54	96	45.681	ENSCLAG00000002924	TSEN54	96	45.681	Chinchilla_lanigera
ENSPNAG00000003770	tsen54	81	57.949	ENSCSAG00000004809	TSEN54	98	44.612	Chlorocebus_sabaeus
ENSPNAG00000003770	tsen54	97	47.719	ENSCPBG00000028071	TSEN54	98	47.467	Chrysemys_picta_bellii
ENSPNAG00000003770	tsen54	98	44.487	ENSCANG00000028053	TSEN54	98	44.487	Colobus_angolensis_palliatus
ENSPNAG00000003770	tsen54	98	43.519	ENSCGRG00001020029	Tsen54	99	43.519	Cricetulus_griseus_chok1gshd
ENSPNAG00000003770	tsen54	84	41.892	ENSCGRG00000016289	Tsen54	99	41.892	Cricetulus_griseus_crigri
ENSPNAG00000003770	tsen54	81	49.289	ENSCSEG00000020586	tsen54	99	49.052	Cynoglossus_semilaevis
ENSPNAG00000003770	tsen54	81	63.183	ENSDARG00000036844	tsen54	100	63.183	Danio_rerio
ENSPNAG00000003770	tsen54	98	45.489	ENSDNOG00000018452	TSEN54	98	46.168	Dasypus_novemcinctus
ENSPNAG00000003770	tsen54	97	45.349	ENSDORG00000004073	Tsen54	97	45.857	Dipodomys_ordii
ENSPNAG00000003770	tsen54	96	31.725	ENSEBUG00000005203	TSEN54	95	31.413	Eptatretus_burgeri
ENSPNAG00000003770	tsen54	98	46.082	ENSEASG00005000579	TSEN54	98	46.082	Equus_asinus_asinus
ENSPNAG00000003770	tsen54	98	45.709	ENSECAG00000004924	TSEN54	98	45.741	Equus_caballus
ENSPNAG00000003770	tsen54	86	44.754	ENSEEUG00000008467	TSEN54	99	44.111	Erinaceus_europaeus
ENSPNAG00000003770	tsen54	98	56.792	ENSELUG00000017703	tsen54	92	56.792	Esox_lucius
ENSPNAG00000003770	tsen54	78	61.326	ENSFCAG00000023712	TSEN54	99	45.251	Felis_catus
ENSPNAG00000003770	tsen54	93	47.233	ENSFALG00000001119	TSEN54	92	47.347	Ficedula_albicollis
ENSPNAG00000003770	tsen54	86	45.119	ENSFDAG00000019090	TSEN54	99	45.119	Fukomys_damarensis
ENSPNAG00000003770	tsen54	97	56.250	ENSFHEG00000005470	tsen54	97	56.250	Fundulus_heteroclitus
ENSPNAG00000003770	tsen54	86	50.000	ENSGMOG00000013146	tsen54	99	50.000	Gadus_morhua
ENSPNAG00000003770	tsen54	93	46.092	ENSGALG00000047163	TSEN54	96	46.092	Gallus_gallus
ENSPNAG00000003770	tsen54	97	57.115	ENSGAFG00000005111	tsen54	97	57.115	Gambusia_affinis
ENSPNAG00000003770	tsen54	96	51.663	ENSGACG00000014987	tsen54	99	51.468	Gasterosteus_aculeatus
ENSPNAG00000003770	tsen54	97	48.462	ENSGAGG00000006825	TSEN54	96	48.269	Gopherus_agassizii
ENSPNAG00000003770	tsen54	79	59.669	ENSGGOG00000009417	TSEN54	99	45.437	Gorilla_gorilla
ENSPNAG00000003770	tsen54	88	53.518	ENSHBUG00000018296	tsen54	99	48.095	Haplochromis_burtoni
ENSPNAG00000003770	tsen54	96	45.507	ENSHGLG00000007979	TSEN54	97	45.333	Heterocephalus_glaber_female
ENSPNAG00000003770	tsen54	96	44.551	ENSHGLG00100005497	TSEN54	97	44.381	Heterocephalus_glaber_male
ENSPNAG00000003770	tsen54	81	52.482	ENSHCOG00000007481	tsen54	99	52.482	Hippocampus_comes
ENSPNAG00000003770	tsen54	100	64.176	ENSIPUG00000000590	tsen54	100	62.760	Ictalurus_punctatus
ENSPNAG00000003770	tsen54	97	44.821	ENSSTOG00000012883	TSEN54	97	44.821	Ictidomys_tridecemlineatus
ENSPNAG00000003770	tsen54	98	46.981	ENSJJAG00000007365	Tsen54	99	46.981	Jaculus_jaculus
ENSPNAG00000003770	tsen54	97	55.598	ENSKMAG00000006944	tsen54	98	55.598	Kryptolebias_marmoratus
ENSPNAG00000003770	tsen54	98	54.599	ENSLBEG00000004199	tsen54	98	54.492	Labrus_bergylta
ENSPNAG00000003770	tsen54	96	41.509	ENSLACG00000009497	TSEN54	99	41.917	Latimeria_chalumnae
ENSPNAG00000003770	tsen54	100	54.104	ENSLOCG00000011191	tsen54	99	53.645	Lepisosteus_oculatus
ENSPNAG00000003770	tsen54	92	45.935	ENSLAFG00000011655	TSEN54	92	45.902	Loxodonta_africana
ENSPNAG00000003770	tsen54	81	57.949	ENSMFAG00000000712	TSEN54	90	54.762	Macaca_fascicularis
ENSPNAG00000003770	tsen54	81	57.949	ENSMNEG00000029199	TSEN54	90	54.762	Macaca_nemestrina
ENSPNAG00000003770	tsen54	69	63.281	ENSMLEG00000044168	TSEN54	88	44.372	Mandrillus_leucophaeus
ENSPNAG00000003770	tsen54	97	57.708	ENSMAMG00000019773	tsen54	97	57.988	Mastacembelus_armatus
ENSPNAG00000003770	tsen54	98	54.826	ENSMZEG00005000884	tsen54	98	54.808	Maylandia_zebra
ENSPNAG00000003770	tsen54	92	44.970	ENSMGAG00000009556	TSEN54	92	46.185	Meleagris_gallopavo
ENSPNAG00000003770	tsen54	98	44.528	ENSMAUG00000016838	Tsen54	99	44.528	Mesocricetus_auratus
ENSPNAG00000003770	tsen54	97	47.544	ENSMICG00000044012	TSEN54	97	47.741	Microcebus_murinus
ENSPNAG00000003770	tsen54	98	44.906	ENSMOCG00000021585	Tsen54	99	44.906	Microtus_ochrogaster
ENSPNAG00000003770	tsen54	96	50.690	ENSMMOG00000020189	tsen54	99	51.874	Mola_mola
ENSPNAG00000003770	tsen54	97	43.925	ENSMODG00000007438	TSEN54	97	44.096	Monodelphis_domestica
ENSPNAG00000003770	tsen54	97	55.945	ENSMALG00000020573	tsen54	97	55.945	Monopterus_albus
ENSPNAG00000003770	tsen54	97	43.870	MGP_CAROLIEiJ_G0017417	Tsen54	97	44.061	Mus_caroli
ENSPNAG00000003770	tsen54	97	44.256	ENSMUSG00000020781	Tsen54	97	44.256	Mus_musculus
ENSPNAG00000003770	tsen54	97	44.256	MGP_PahariEiJ_G0018547	Tsen54	97	44.256	Mus_pahari
ENSPNAG00000003770	tsen54	97	44.569	MGP_SPRETEiJ_G0018262	Tsen54	97	44.569	Mus_spretus
ENSPNAG00000003770	tsen54	98	44.697	ENSMPUG00000013870	TSEN54	98	45.351	Mustela_putorius_furo
ENSPNAG00000003770	tsen54	96	46.032	ENSMLUG00000015298	TSEN54	96	46.337	Myotis_lucifugus
ENSPNAG00000003770	tsen54	97	45.472	ENSNGAG00000015673	Tsen54	97	45.472	Nannospalax_galili
ENSPNAG00000003770	tsen54	88	42.194	ENSMEUG00000011908	TSEN54	99	42.194	Notamacropus_eugenii
ENSPNAG00000003770	tsen54	98	43.048	ENSOPRG00000012513	TSEN54	98	43.048	Ochotona_princeps
ENSPNAG00000003770	tsen54	98	55.877	ENSONIG00000009543	tsen54	98	55.877	Oreochromis_niloticus
ENSPNAG00000003770	tsen54	98	42.672	ENSOCUG00000009875	TSEN54	99	42.804	Oryctolagus_cuniculus
ENSPNAG00000003770	tsen54	98	55.361	ENSORLG00000000852	tsen54	99	55.361	Oryzias_latipes
ENSPNAG00000003770	tsen54	98	55.361	ENSORLG00020018221	tsen54	99	55.361	Oryzias_latipes_hni
ENSPNAG00000003770	tsen54	98	55.039	ENSORLG00015009413	tsen54	99	55.039	Oryzias_latipes_hsok
ENSPNAG00000003770	tsen54	99	55.126	ENSOMEG00000014402	tsen54	97	54.932	Oryzias_melastigma
ENSPNAG00000003770	tsen54	97	43.954	ENSOGAG00000001442	TSEN54	97	43.954	Otolemur_garnettii
ENSPNAG00000003770	tsen54	86	43.197	ENSOARG00000010361	TSEN54	99	43.844	Ovis_aries
ENSPNAG00000003770	tsen54	77	58.382	ENSPPAG00000043519	TSEN54	99	45.709	Pan_paniscus
ENSPNAG00000003770	tsen54	78	61.878	ENSPPRG00000009162	TSEN54	99	45.438	Panthera_pardus
ENSPNAG00000003770	tsen54	86	44.681	ENSPTIG00000019312	TSEN54	96	45.238	Panthera_tigris_altaica
ENSPNAG00000003770	tsen54	81	57.949	ENSPTRG00000009646	TSEN54	98	45.113	Pan_troglodytes
ENSPNAG00000003770	tsen54	81	57.949	ENSPANG00000020133	TSEN54	89	54.762	Papio_anubis
ENSPNAG00000003770	tsen54	99	54.265	ENSPKIG00000023018	tsen54	99	57.007	Paramormyrops_kingsleyae
ENSPNAG00000003770	tsen54	81	46.744	ENSPSIG00000012807	TSEN54	100	46.744	Pelodiscus_sinensis
ENSPNAG00000003770	tsen54	93	42.041	ENSPMGG00000019578	tsen54	99	42.041	Periophthalmus_magnuspinnatus
ENSPNAG00000003770	tsen54	98	44.444	ENSPEMG00000014857	Tsen54	99	44.444	Peromyscus_maniculatus_bairdii
ENSPNAG00000003770	tsen54	97	56.950	ENSPFOG00000022740	tsen54	97	56.950	Poecilia_formosa
ENSPNAG00000003770	tsen54	97	57.198	ENSPLAG00000014847	tsen54	97	57.198	Poecilia_latipinna
ENSPNAG00000003770	tsen54	97	57.004	ENSPMEG00000022876	tsen54	97	57.004	Poecilia_mexicana
ENSPNAG00000003770	tsen54	100	56.513	ENSPREG00000013090	tsen54	99	56.513	Poecilia_reticulata
ENSPNAG00000003770	tsen54	91	44.444	ENSPPYG00000008629	TSEN54	99	44.842	Pongo_abelii
ENSPNAG00000003770	tsen54	92	41.667	ENSPCAG00000002093	TSEN54	97	41.260	Procavia_capensis
ENSPNAG00000003770	tsen54	97	45.779	ENSPCOG00000027880	TSEN54	98	47.206	Propithecus_coquereli
ENSPNAG00000003770	tsen54	99	46.629	ENSPVAG00000008446	TSEN54	99	46.642	Pteropus_vampyrus
ENSPNAG00000003770	tsen54	93	55.221	ENSPNYG00000010217	tsen54	99	55.200	Pundamilia_nyererei
ENSPNAG00000003770	tsen54	98	45.234	ENSRNOG00000004598	Tsen54	99	45.234	Rattus_norvegicus
ENSPNAG00000003770	tsen54	98	44.297	ENSRBIG00000043040	TSEN54	98	44.423	Rhinopithecus_bieti
ENSPNAG00000003770	tsen54	98	44.297	ENSRROG00000030797	TSEN54	98	44.234	Rhinopithecus_roxellana
ENSPNAG00000003770	tsen54	97	45.094	ENSSHAG00000018127	TSEN54	96	45.094	Sarcophilus_harrisii
ENSPNAG00000003770	tsen54	80	56.635	ENSSFOG00015004093	tsen54	99	56.635	Scleropages_formosus
ENSPNAG00000003770	tsen54	97	56.164	ENSSMAG00000012449	tsen54	98	55.490	Scophthalmus_maximus
ENSPNAG00000003770	tsen54	97	55.985	ENSSDUG00000021506	tsen54	97	55.985	Seriola_dumerili
ENSPNAG00000003770	tsen54	97	55.985	ENSSLDG00000016303	tsen54	97	55.985	Seriola_lalandi_dorsalis
ENSPNAG00000003770	tsen54	80	42.361	ENSSPUG00000008988	TSEN54	96	42.227	Sphenodon_punctatus
ENSPNAG00000003770	tsen54	93	55.691	ENSSPAG00000008098	-	99	55.691	Stegastes_partitus
ENSPNAG00000003770	tsen54	81	51.643	ENSSPAG00000008047	tsen54	99	51.643	Stegastes_partitus
ENSPNAG00000003770	tsen54	96	46.628	ENSSSCG00000036852	TSEN54	97	46.628	Sus_scrofa
ENSPNAG00000003770	tsen54	86	47.835	ENSTGUG00000008548	TSEN54	99	47.072	Taeniopygia_guttata
ENSPNAG00000003770	tsen54	99	54.721	ENSTRUG00000004230	tsen54	99	55.106	Takifugu_rubripes
ENSPNAG00000003770	tsen54	96	55.819	ENSTNIG00000011281	tsen54	97	56.275	Tetraodon_nigroviridis
ENSPNAG00000003770	tsen54	86	45.119	ENSTTRG00000015828	TSEN54	99	45.119	Tursiops_truncatus
ENSPNAG00000003770	tsen54	80	44.037	ENSUAMG00000010045	TSEN54	99	44.037	Ursus_americanus
ENSPNAG00000003770	tsen54	83	43.833	ENSUMAG00000008979	TSEN54	99	45.067	Ursus_maritimus
ENSPNAG00000003770	tsen54	95	45.216	ENSVVUG00000011411	TSEN54	97	46.304	Vulpes_vulpes
ENSPNAG00000003770	tsen54	97	45.489	ENSXETG00000012532	tsen54	99	62.500	Xenopus_tropicalis
ENSPNAG00000003770	tsen54	97	44.336	ENSXCOG00000018245	tsen54	99	52.235	Xiphophorus_couchianus
ENSPNAG00000003770	tsen54	97	57.087	ENSXMAG00000018818	tsen54	97	57.087	Xiphophorus_maculatus