EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000003803 (Gene tree)
Gene ID: 108437779
Gene Symbol: arl13b
Alias: arl2l1|chunp6872|dkfzp761h079|fc23g07|scorpion|un-named hi459|unm hi459|wu:fc23g07|zgc:123149
Full Name: ADP ribosylation factor like GTPase 13B
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 17267 bases
Position: chrKV575531.1:1155908-1173174
Accession: 108437779
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000034591	MMR_HSR1	PF01926.23	8.1e-05	1	1
ENSPNAP00000017682	MMR_HSR1	PF01926.23	8.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000026552	-	4449	XM_017715134	ENSPNAP00000034591	399 (aa)	XP_017570623	-
ENSPNAT00000038630	-	4382	XM_017715132	ENSPNAP00000017682	408 (aa)	XP_017570621	UPI000814AC2C

Gene Model

Click here to download ENSPNAG00000003803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000003803's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000003803	arl13b	99	79.177	ENSAPOG00000013256	arl13b	99	77.724	Acanthochromis_polyacanthus
ENSPNAG00000003803	arl13b	100	78.484	ENSACIG00000017582	arl13b	90	93.548	Amphilophus_citrinellus
ENSPNAG00000003803	arl13b	99	79.177	ENSAOCG00000002828	arl13b	99	77.724	Amphiprion_ocellaris
ENSPNAG00000003803	arl13b	96	78.462	ENSAPEG00000014654	arl13b	99	77.635	Amphiprion_percula
ENSPNAG00000003803	arl13b	99	75.122	ENSATEG00000017586	arl13b	99	74.576	Anabas_testudineus
ENSPNAG00000003803	arl13b	96	59.330	ENSACAG00000000523	ARL13B	100	60.048	Anolis_carolinensis
ENSPNAG00000003803	arl13b	100	74.878	ENSACLG00000024227	arl13b	86	92.574	Astatotilapia_calliptera
ENSPNAG00000003803	arl13b	100	91.463	ENSAMXG00000042824	arl13b	100	90.732	Astyanax_mexicanus
ENSPNAG00000003803	arl13b	95	56.743	ENSCAPG00000006764	ARL13B	72	72.489	Cavia_aperea
ENSPNAG00000003803	arl13b	99	58.333	ENSCPOG00000002558	ARL13B	99	56.341	Cavia_porcellus
ENSPNAG00000003803	arl13b	95	61.871	ENSCLAG00000006379	ARL13B	100	59.709	Chinchilla_lanigera
ENSPNAG00000003803	arl13b	100	63.678	ENSCPBG00000005599	ARL13B	100	62.269	Chrysemys_picta_bellii
ENSPNAG00000003803	arl13b	99	72.947	ENSCSEG00000005258	arl13b	99	72.048	Cynoglossus_semilaevis
ENSPNAG00000003803	arl13b	100	74.272	ENSCVAG00000001545	arl13b	86	90.783	Cyprinodon_variegatus
ENSPNAG00000003803	arl13b	100	85.610	ENSDARG00000012763	arl13b	100	85.610	Danio_rerio
ENSPNAG00000003803	arl13b	67	51.685	ENSEBUG00000006528	arl13b	90	51.111	Eptatretus_burgeri
ENSPNAG00000003803	arl13b	100	56.948	ENSEEUG00000010823	ARL13B	74	73.897	Erinaceus_europaeus
ENSPNAG00000003803	arl13b	96	60.049	ENSFALG00000001654	ARL13B	99	60.100	Ficedula_albicollis
ENSPNAG00000003803	arl13b	100	63.488	ENSFDAG00000006556	ARL13B	100	63.109	Fukomys_damarensis
ENSPNAG00000003803	arl13b	96	73.902	ENSFHEG00000016049	arl13b	99	73.247	Fundulus_heteroclitus
ENSPNAG00000003803	arl13b	83	82.031	ENSGMOG00000018628	arl13b	100	83.534	Gadus_morhua
ENSPNAG00000003803	arl13b	98	72.277	ENSGAFG00000000025	arl13b	81	90.323	Gambusia_affinis
ENSPNAG00000003803	arl13b	99	76.214	ENSGACG00000014228	arl13b	99	74.572	Gasterosteus_aculeatus
ENSPNAG00000003803	arl13b	100	61.731	ENSGAGG00000019336	ARL13B	100	61.839	Gopherus_agassizii
ENSPNAG00000003803	arl13b	100	78.832	ENSHBUG00000020619	arl13b	100	77.859	Haplochromis_burtoni
ENSPNAG00000003803	arl13b	96	75.389	ENSHCOG00000006106	arl13b	99	75.389	Hippocampus_comes
ENSPNAG00000003803	arl13b	99	78.484	ENSKMAG00000001122	arl13b	99	76.642	Kryptolebias_marmoratus
ENSPNAG00000003803	arl13b	99	77.913	ENSLBEG00000014612	arl13b	99	76.555	Labrus_bergylta
ENSPNAG00000003803	arl13b	100	69.773	ENSLOCG00000010465	arl13b	62	84.387	Lepisosteus_oculatus
ENSPNAG00000003803	arl13b	99	78.537	ENSMAMG00000021452	arl13b	99	78.450	Mastacembelus_armatus
ENSPNAG00000003803	arl13b	100	78.589	ENSMZEG00005017827	arl13b	100	77.616	Maylandia_zebra
ENSPNAG00000003803	arl13b	99	74.453	ENSMMOG00000010253	arl13b	99	74.328	Mola_mola
ENSPNAG00000003803	arl13b	99	67.076	ENSMALG00000014655	arl13b	99	67.157	Monopterus_albus
ENSPNAG00000003803	arl13b	100	61.379	MGP_CAROLIEiJ_G0020856	Arl13b	62	71.747	Mus_caroli
ENSPNAG00000003803	arl13b	100	61.009	ENSMUSG00000022911	Arl13b	62	71.747	Mus_musculus
ENSPNAG00000003803	arl13b	100	62.181	MGP_PahariEiJ_G0016561	Arl13b	100	59.954	Mus_pahari
ENSPNAG00000003803	arl13b	100	61.327	MGP_SPRETEiJ_G0021763	Arl13b	62	72.119	Mus_spretus
ENSPNAG00000003803	arl13b	95	61.779	ENSMLUG00000017473	ARL13B	96	62.287	Myotis_lucifugus
ENSPNAG00000003803	arl13b	100	74.146	ENSNBRG00000004078	arl13b	87	93.548	Neolamprologus_brichardi
ENSPNAG00000003803	arl13b	100	60.970	ENSNLEG00000001772	ARL13B	62	71.269	Nomascus_leucogenys
ENSPNAG00000003803	arl13b	77	63.968	ENSMEUG00000008036	-	61	63.968	Notamacropus_eugenii
ENSPNAG00000003803	arl13b	100	61.628	ENSODEG00000011381	ARL13B	100	63.109	Octodon_degus
ENSPNAG00000003803	arl13b	100	74.886	ENSONIG00000001864	arl13b	100	72.831	Oreochromis_niloticus
ENSPNAG00000003803	arl13b	99	76.773	ENSORLG00000006350	arl13b	86	92.627	Oryzias_latipes
ENSPNAG00000003803	arl13b	99	76.284	ENSORLG00020013754	arl13b	99	76.284	Oryzias_latipes_hni
ENSPNAG00000003803	arl13b	99	76.528	ENSORLG00015012586	arl13b	99	75.306	Oryzias_latipes_hsok
ENSPNAG00000003803	arl13b	54	88.018	ENSOMEG00000010187	arl13b	84	88.018	Oryzias_melastigma
ENSPNAG00000003803	arl13b	96	62.500	ENSPSIG00000018115	ARL13B	100	60.817	Pelodiscus_sinensis
ENSPNAG00000003803	arl13b	99	74.939	ENSPMGG00000004584	arl13b	99	74.818	Periophthalmus_magnuspinnatus
ENSPNAG00000003803	arl13b	100	48.276	ENSPCIG00000026984	ARL13B	62	59.926	Phascolarctos_cinereus
ENSPNAG00000003803	arl13b	100	74.390	ENSPFOG00000005379	arl13b	100	73.659	Poecilia_formosa
ENSPNAG00000003803	arl13b	96	74.545	ENSPLAG00000008699	arl13b	99	73.766	Poecilia_latipinna
ENSPNAG00000003803	arl13b	97	72.980	ENSPMEG00000015387	arl13b	99	72.774	Poecilia_mexicana
ENSPNAG00000003803	arl13b	100	72.993	ENSPREG00000006291	arl13b	100	73.479	Poecilia_reticulata
ENSPNAG00000003803	arl13b	95	73.913	ENSPNYG00000022879	arl13b	98	69.643	Pundamilia_nyererei
ENSPNAG00000003803	arl13b	56	85.778	ENSSFOG00015005491	arl13b	83	87.324	Scleropages_formosus
ENSPNAG00000003803	arl13b	54	73.611	ENSSFOG00015023057	arl13b	85	73.611	Scleropages_formosus
ENSPNAG00000003803	arl13b	99	72.488	ENSSMAG00000015450	arl13b	99	69.830	Scophthalmus_maximus
ENSPNAG00000003803	arl13b	96	79.845	ENSSDUG00000005560	arl13b	97	80.000	Seriola_dumerili
ENSPNAG00000003803	arl13b	96	79.587	ENSSLDG00000013361	arl13b	99	79.949	Seriola_lalandi_dorsalis
ENSPNAG00000003803	arl13b	99	62.299	ENSSARG00000003872	ARL13B	99	62.617	Sorex_araneus
ENSPNAG00000003803	arl13b	58	82.609	ENSSPUG00000006649	ARL13B	88	82.028	Sphenodon_punctatus
ENSPNAG00000003803	arl13b	96	78.811	ENSSPAG00000016442	arl13b	91	76.382	Stegastes_partitus
ENSPNAG00000003803	arl13b	100	62.587	ENSTGUG00000013493	ARL13B	100	58.430	Taeniopygia_guttata
ENSPNAG00000003803	arl13b	52	71.770	ENSTRUG00000003641	arl13b	74	70.408	Takifugu_rubripes
ENSPNAG00000003803	arl13b	100	52.539	ENSTRUG00000013035	-	84	70.968	Takifugu_rubripes
ENSPNAG00000003803	arl13b	100	59.016	ENSVVUG00000021511	ARL13B	66	74.349	Vulpes_vulpes
ENSPNAG00000003803	arl13b	100	61.312	ENSXETG00000032383	ARL13B	97	77.985	Xenopus_tropicalis
ENSPNAG00000003803	arl13b	68	34.892	ENSXETG00000026166	arl13a	50	40.284	Xenopus_tropicalis
ENSPNAG00000003803	arl13b	100	71.707	ENSXCOG00000016955	arl13b	100	71.463	Xiphophorus_couchianus
ENSPNAG00000003803	arl13b	99	73.048	ENSXMAG00000002089	arl13b	99	73.077	Xiphophorus_maculatus