EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000003839 (Gene tree)
Gene ID: 108429979
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 502-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 6442 bases
Position: chrKV575366.1:2579023-2585464
Accession: 108429979
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000018331	zf-C2H2	PF00096.26	1.8e-35	1	6
ENSPNAP00000018331	zf-C2H2	PF00096.26	1.8e-35	2	6
ENSPNAP00000018331	zf-C2H2	PF00096.26	1.8e-35	3	6
ENSPNAP00000018331	zf-C2H2	PF00096.26	1.8e-35	4	6
ENSPNAP00000018331	zf-C2H2	PF00096.26	1.8e-35	5	6
ENSPNAP00000018331	zf-C2H2	PF00096.26	1.8e-35	6	6
ENSPNAP00000018331	zf-met	PF12874.7	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000027485	-	2968	XM_017702088	ENSPNAP00000018331	406 (aa)	XP_017557577	UPI0008147BF6

Gene Model

Click here to download ENSPNAG00000003839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000003839's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000003839	-	77	31.200	ENSPNAG00000003526	-	84	31.200
ENSPNAG00000003839	-	75	42.857	ENSPNAG00000018471	-	83	42.857
ENSPNAG00000003839	-	75	36.170	ENSPNAG00000020571	znf526	52	36.170
ENSPNAG00000003839	-	75	42.169	ENSPNAG00000008491	-	77	42.169
ENSPNAG00000003839	-	76	42.353	ENSPNAG00000021831	-	82	42.353
ENSPNAG00000003839	-	53	36.364	ENSPNAG00000001150	znf648	50	36.364
ENSPNAG00000003839	-	76	31.250	ENSPNAG00000012206	-	94	31.250
ENSPNAG00000003839	-	77	33.058	ENSPNAG00000012495	-	79	33.058
ENSPNAG00000003839	-	86	31.387	ENSPNAG00000021863	-	86	31.387
ENSPNAG00000003839	-	80	44.578	ENSPNAG00000029386	-	83	44.578
ENSPNAG00000003839	-	75	39.773	ENSPNAG00000002244	-	81	39.773
ENSPNAG00000003839	-	82	34.375	ENSPNAG00000005914	-	74	34.375
ENSPNAG00000003839	-	76	39.080	ENSPNAG00000003017	-	89	39.080
ENSPNAG00000003839	-	84	31.933	ENSPNAG00000000303	-	65	31.933
ENSPNAG00000003839	-	86	33.065	ENSPNAG00000009164	-	85	33.065
ENSPNAG00000003839	-	93	38.636	ENSPNAG00000017138	znf236	72	38.636
ENSPNAG00000003839	-	85	31.933	ENSPNAG00000000783	-	84	36.471
ENSPNAG00000003839	-	77	36.782	ENSPNAG00000025882	-	60	36.782
ENSPNAG00000003839	-	85	32.558	ENSPNAG00000017479	-	83	32.558
ENSPNAG00000003839	-	75	50.000	ENSPNAG00000005829	-	96	44.578
ENSPNAG00000003839	-	85	31.008	ENSPNAG00000006821	-	84	30.189
ENSPNAG00000003839	-	87	49.180	ENSPNAG00000009184	-	76	49.180
ENSPNAG00000003839	-	86	31.034	ENSPNAG00000005857	-	88	30.282
ENSPNAG00000003839	-	77	43.077	ENSPNAG00000021075	-	94	43.077
ENSPNAG00000003839	-	83	51.667	ENSPNAG00000002209	-	94	51.667
ENSPNAG00000003839	-	82	39.759	ENSPNAG00000015131	-	86	39.759
ENSPNAG00000003839	-	78	35.165	ENSPNAG00000003702	-	80	35.165
ENSPNAG00000003839	-	77	34.694	ENSPNAG00000017468	-	91	34.694

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000003839	-	100	83.495	ENSAMXG00000038507	-	100	83.495	Astyanax_mexicanus
ENSPNAG00000003839	-	84	40.751	ENSCSEG00000012798	-	99	40.173	Cynoglossus_semilaevis
ENSPNAG00000003839	-	98	52.228	ENSELUG00000009258	-	98	51.111	Esox_lucius
ENSPNAG00000003839	-	97	64.989	ENSELUG00000020907	-	100	61.978	Esox_lucius
ENSPNAG00000003839	-	98	60.644	ENSFHEG00000005807	-	97	61.881	Fundulus_heteroclitus
ENSPNAG00000003839	-	99	62.774	ENSGAFG00000003348	-	98	62.291	Gambusia_affinis
ENSPNAG00000003839	-	100	80.147	ENSIPUG00000002513	-	100	79.227	Ictalurus_punctatus
ENSPNAG00000003839	-	99	64.234	ENSKMAG00000014028	-	91	63.902	Kryptolebias_marmoratus
ENSPNAG00000003839	-	99	61.298	ENSMMOG00000009859	-	100	61.962	Mola_mola
ENSPNAG00000003839	-	98	62.439	ENSORLG00000023072	-	98	61.594	Oryzias_latipes
ENSPNAG00000003839	-	98	61.614	ENSORLG00020002684	-	98	61.594	Oryzias_latipes_hni
ENSPNAG00000003839	-	98	61.614	ENSORLG00015018897	-	98	61.836	Oryzias_latipes_hsok
ENSPNAG00000003839	-	98	60.584	ENSOMEG00000010520	-	93	61.408	Oryzias_melastigma
ENSPNAG00000003839	-	99	62.440	ENSPLAG00000005849	-	98	61.962	Poecilia_latipinna
ENSPNAG00000003839	-	99	62.774	ENSPMEG00000020957	-	98	61.575	Poecilia_mexicana
ENSPNAG00000003839	-	99	62.954	ENSPREG00000007939	-	98	61.429	Poecilia_reticulata
ENSPNAG00000003839	-	98	69.951	ENSSFOG00015019679	-	98	69.212	Scleropages_formosus
ENSPNAG00000003839	-	99	62.954	ENSXCOG00000015432	-	98	61.995	Xiphophorus_couchianus
ENSPNAG00000003839	-	99	63.196	ENSXMAG00000029995	-	88	62.233	Xiphophorus_maculatus