EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000003938 (Gene tree)
Gene ID: 108436833
Gene Symbol: pus1
Alias: wu:fb98h11|zgc:103516
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 3354 bases
Position: chrKV575293.1:3215020-3218373
Accession: 108436833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000035546	PseudoU_synth_1	PF01416.20	9.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000028728	-	1665	XM_017713545	ENSPNAP00000035546	422 (aa)	XP_017569034	UPI0008146A8A

Gene Model

Click here to download ENSPNAG00000003938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000003938's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000003938	pus1	82	73.256	ENSG00000177192	PUS1	89	73.256	Homo_sapiens
ENSPNAG00000003938	pus1	94	71.744	ENSAPOG00000007254	pus1	96	71.744	Acanthochromis_polyacanthus
ENSPNAG00000003938	pus1	82	71.221	ENSAMEG00000013715	PUS1	84	71.221	Ailuropoda_melanoleuca
ENSPNAG00000003938	pus1	96	72.087	ENSACIG00000009169	pus1	99	72.087	Amphilophus_citrinellus
ENSPNAG00000003938	pus1	91	75.127	ENSAOCG00000022207	pus1	93	75.127	Amphiprion_ocellaris
ENSPNAG00000003938	pus1	91	75.127	ENSAPEG00000006039	pus1	100	75.127	Amphiprion_percula
ENSPNAG00000003938	pus1	88	75.067	ENSATEG00000020688	pus1	95	75.067	Anabas_testudineus
ENSPNAG00000003938	pus1	84	72.316	ENSACAG00000007367	PUS1	95	72.316	Anolis_carolinensis
ENSPNAG00000003938	pus1	72	73.510	ENSANAG00000036192	PUS1	93	73.510	Aotus_nancymaae
ENSPNAG00000003938	pus1	88	74.541	ENSACLG00000020868	pus1	97	74.541	Astatotilapia_calliptera
ENSPNAG00000003938	pus1	100	84.954	ENSAMXG00000008710	pus1	100	84.954	Astyanax_mexicanus
ENSPNAG00000003938	pus1	82	71.221	ENSBTAG00000012990	PUS1	86	71.221	Bos_taurus
ENSPNAG00000003938	pus1	78	39.826	WBGene00004248	pus-1	81	40.346	Caenorhabditis_elegans
ENSPNAG00000003938	pus1	60	71.146	ENSCJAG00000003720	PUS1	70	71.206	Callithrix_jacchus
ENSPNAG00000003938	pus1	81	70.435	ENSCAFG00000006429	PUS1	87	70.435	Canis_familiaris
ENSPNAG00000003938	pus1	81	70.435	ENSCAFG00020010737	PUS1	80	70.435	Canis_lupus_dingo
ENSPNAG00000003938	pus1	60	30.584	ENSCHIG00000012260	PUS3	54	30.584	Capra_hircus
ENSPNAG00000003938	pus1	82	70.930	ENSCHIG00000000487	PUS1	86	70.930	Capra_hircus
ENSPNAG00000003938	pus1	81	71.637	ENSTSYG00000032605	PUS1	98	68.852	Carlito_syrichta
ENSPNAG00000003938	pus1	71	74.832	ENSCAPG00000006421	PUS1	99	71.875	Cavia_aperea
ENSPNAG00000003938	pus1	76	75.078	ENSCPOG00000001027	PUS1	93	64.975	Cavia_porcellus
ENSPNAG00000003938	pus1	81	72.059	ENSCCAG00000015879	PUS1	84	73.684	Cebus_capucinus
ENSPNAG00000003938	pus1	82	72.093	ENSCATG00000032870	PUS1	83	73.684	Cercocebus_atys
ENSPNAG00000003938	pus1	60	30.420	ENSCLAG00000014947	PUS3	54	30.420	Chinchilla_lanigera
ENSPNAG00000003938	pus1	92	64.341	ENSCLAG00000011689	PUS1	96	62.169	Chinchilla_lanigera
ENSPNAG00000003938	pus1	87	67.374	ENSCSAG00000001879	PUS1	88	67.374	Chlorocebus_sabaeus
ENSPNAG00000003938	pus1	75	72.468	ENSCPBG00000024715	PUS1	91	71.429	Chrysemys_picta_bellii
ENSPNAG00000003938	pus1	79	45.482	ENSCING00000009426	-	88	45.482	Ciona_intestinalis
ENSPNAG00000003938	pus1	77	43.865	ENSCSAVG00000003751	-	67	43.865	Ciona_savignyi
ENSPNAG00000003938	pus1	82	63.953	ENSCANG00000035561	PUS1	83	66.775	Colobus_angolensis_palliatus
ENSPNAG00000003938	pus1	74	31.143	ENSCGRG00001019842	Pus3	65	31.143	Cricetulus_griseus_chok1gshd
ENSPNAG00000003938	pus1	82	73.121	ENSCGRG00001019592	Pus1	82	73.121	Cricetulus_griseus_chok1gshd
ENSPNAG00000003938	pus1	74	31.143	ENSCGRG00000010155	Pus3	65	31.143	Cricetulus_griseus_crigri
ENSPNAG00000003938	pus1	82	73.121	ENSCGRG00000004048	Pus1	88	73.121	Cricetulus_griseus_crigri
ENSPNAG00000003938	pus1	91	69.666	ENSCSEG00000003629	pus1	93	69.666	Cynoglossus_semilaevis
ENSPNAG00000003938	pus1	88	76.190	ENSCVAG00000001265	pus1	90	76.190	Cyprinodon_variegatus
ENSPNAG00000003938	pus1	98	71.429	ENSDARG00000045562	pus1	97	80.812	Danio_rerio
ENSPNAG00000003938	pus1	60	30.690	ENSDNOG00000040719	PUS3	54	30.690	Dasypus_novemcinctus
ENSPNAG00000003938	pus1	93	62.562	ENSDNOG00000045576	PUS1	95	71.197	Dasypus_novemcinctus
ENSPNAG00000003938	pus1	72	75.828	ENSDORG00000011455	Pus1	93	75.828	Dipodomys_ordii
ENSPNAG00000003938	pus1	76	49.538	FBgn0038811	PUS1	78	49.538	Drosophila_melanogaster
ENSPNAG00000003938	pus1	81	72.059	ENSETEG00000019160	PUS1	85	71.387	Echinops_telfairi
ENSPNAG00000003938	pus1	82	41.689	ENSEBUG00000000368	-	69	41.333	Eptatretus_burgeri
ENSPNAG00000003938	pus1	94	64.234	ENSEASG00005016535	PUS1	95	64.234	Equus_asinus_asinus
ENSPNAG00000003938	pus1	82	72.754	ENSECAG00000006965	PUS1	87	72.754	Equus_caballus
ENSPNAG00000003938	pus1	60	30.070	ENSEEUG00000010543	PUS3	54	30.070	Erinaceus_europaeus
ENSPNAG00000003938	pus1	91	75.897	ENSELUG00000010424	pus1	99	75.897	Esox_lucius
ENSPNAG00000003938	pus1	67	30.094	ENSFCAG00000005340	PUS3	59	30.094	Felis_catus
ENSPNAG00000003938	pus1	82	71.802	ENSFCAG00000010780	PUS1	81	71.802	Felis_catus
ENSPNAG00000003938	pus1	90	67.949	ENSFALG00000008273	PUS1	91	67.949	Ficedula_albicollis
ENSPNAG00000003938	pus1	84	70.391	ENSFDAG00000012518	PUS1	89	69.505	Fukomys_damarensis
ENSPNAG00000003938	pus1	91	73.846	ENSFHEG00000010504	pus1	92	75.132	Fundulus_heteroclitus
ENSPNAG00000003938	pus1	87	71.774	ENSGMOG00000008143	pus1	96	71.774	Gadus_morhua
ENSPNAG00000003938	pus1	85	70.718	ENSGALG00000002354	PUS1	88	70.718	Gallus_gallus
ENSPNAG00000003938	pus1	90	73.779	ENSGAFG00000006578	pus1	93	73.779	Gambusia_affinis
ENSPNAG00000003938	pus1	91	72.539	ENSGACG00000017566	pus1	98	72.539	Gasterosteus_aculeatus
ENSPNAG00000003938	pus1	76	70.186	ENSGAGG00000016730	-	93	70.186	Gopherus_agassizii
ENSPNAG00000003938	pus1	82	73.547	ENSGGOG00000009178	PUS1	81	75.000	Gorilla_gorilla
ENSPNAG00000003938	pus1	88	75.066	ENSHBUG00000001316	pus1	97	75.066	Haplochromis_burtoni
ENSPNAG00000003938	pus1	81	70.058	ENSHGLG00000016086	PUS1	99	64.175	Heterocephalus_glaber_female
ENSPNAG00000003938	pus1	65	30.225	ENSHGLG00000015753	-	79	30.225	Heterocephalus_glaber_female
ENSPNAG00000003938	pus1	81	69.767	ENSHGLG00100019362	PUS1	98	64.156	Heterocephalus_glaber_male
ENSPNAG00000003938	pus1	91	72.987	ENSHCOG00000014288	pus1	88	72.987	Hippocampus_comes
ENSPNAG00000003938	pus1	100	82.629	ENSIPUG00000010387	pus1	100	82.629	Ictalurus_punctatus
ENSPNAG00000003938	pus1	60	30.928	ENSSTOG00000003721	PUS3	54	30.928	Ictidomys_tridecemlineatus
ENSPNAG00000003938	pus1	80	74.556	ENSSTOG00000011245	PUS1	84	71.788	Ictidomys_tridecemlineatus
ENSPNAG00000003938	pus1	81	73.178	ENSJJAG00000000088	Pus1	81	73.178	Jaculus_jaculus
ENSPNAG00000003938	pus1	88	72.386	ENSKMAG00000012702	pus1	89	72.386	Kryptolebias_marmoratus
ENSPNAG00000003938	pus1	88	75.397	ENSLBEG00000002845	pus1	93	75.397	Labrus_bergylta
ENSPNAG00000003938	pus1	77	58.514	ENSLACG00000016044	-	98	58.514	Latimeria_chalumnae
ENSPNAG00000003938	pus1	88	66.755	ENSLACG00000018598	PUS1	97	65.729	Latimeria_chalumnae
ENSPNAG00000003938	pus1	88	72.632	ENSLOCG00000006127	pus1	96	72.632	Lepisosteus_oculatus
ENSPNAG00000003938	pus1	82	70.058	ENSLAFG00000028731	PUS1	92	70.058	Loxodonta_africana
ENSPNAG00000003938	pus1	82	72.093	ENSMFAG00000041194	PUS1	85	72.093	Macaca_fascicularis
ENSPNAG00000003938	pus1	82	72.384	ENSMMUG00000031463	PUS1	89	72.384	Macaca_mulatta
ENSPNAG00000003938	pus1	82	72.384	ENSMNEG00000002814	PUS1	83	74.013	Macaca_nemestrina
ENSPNAG00000003938	pus1	72	74.172	ENSMLEG00000043560	PUS1	93	74.172	Mandrillus_leucophaeus
ENSPNAG00000003938	pus1	91	73.575	ENSMAMG00000007371	pus1	92	73.575	Mastacembelus_armatus
ENSPNAG00000003938	pus1	88	74.474	ENSMZEG00005017746	pus1	90	74.474	Maylandia_zebra
ENSPNAG00000003938	pus1	75	72.050	ENSMGAG00000001958	PUS1	98	72.050	Meleagris_gallopavo
ENSPNAG00000003938	pus1	60	30.435	ENSMGAG00000000851	PUS3	65	30.435	Meleagris_gallopavo
ENSPNAG00000003938	pus1	82	73.410	ENSMAUG00000001482	Pus1	82	73.410	Mesocricetus_auratus
ENSPNAG00000003938	pus1	60	31.271	ENSMAUG00000015873	Pus3	54	31.271	Mesocricetus_auratus
ENSPNAG00000003938	pus1	82	71.221	ENSMICG00000030980	PUS1	91	68.022	Microcebus_murinus
ENSPNAG00000003938	pus1	82	72.832	ENSMOCG00000022311	Pus1	82	72.832	Microtus_ochrogaster
ENSPNAG00000003938	pus1	87	75.610	ENSMMOG00000021022	pus1	96	74.400	Mola_mola
ENSPNAG00000003938	pus1	76	71.562	ENSMODG00000015551	PUS1	77	69.006	Monodelphis_domestica
ENSPNAG00000003938	pus1	91	74.093	ENSMALG00000013202	pus1	91	75.668	Monopterus_albus
ENSPNAG00000003938	pus1	67	31.034	MGP_CAROLIEiJ_G0031957	Pus3	87	31.410	Mus_caroli
ENSPNAG00000003938	pus1	82	73.121	MGP_CAROLIEiJ_G0027551	Pus1	88	73.121	Mus_caroli
ENSPNAG00000003938	pus1	67	30.721	ENSMUSG00000032103	Pus3	85	31.148	Mus_musculus
ENSPNAG00000003938	pus1	82	73.121	ENSMUSG00000029507	Pus1	88	73.121	Mus_musculus
ENSPNAG00000003938	pus1	67	30.721	MGP_PahariEiJ_G0014822	Pus3	85	31.148	Mus_pahari
ENSPNAG00000003938	pus1	82	73.121	MGP_PahariEiJ_G0024133	Pus1	88	73.121	Mus_pahari
ENSPNAG00000003938	pus1	60	30.584	MGP_SPRETEiJ_G0033081	Pus3	78	31.047	Mus_spretus
ENSPNAG00000003938	pus1	82	73.121	MGP_SPRETEiJ_G0028549	Pus1	88	73.121	Mus_spretus
ENSPNAG00000003938	pus1	77	73.846	ENSMPUG00000002314	PUS1	82	73.846	Mustela_putorius_furo
ENSPNAG00000003938	pus1	83	67.967	ENSMLUG00000015790	PUS1	99	67.967	Myotis_lucifugus
ENSPNAG00000003938	pus1	82	73.547	ENSNGAG00000012976	Pus1	81	73.547	Nannospalax_galili
ENSPNAG00000003938	pus1	88	75.798	ENSNBRG00000020502	pus1	99	76.567	Neolamprologus_brichardi
ENSPNAG00000003938	pus1	82	70.349	ENSNLEG00000008505	PUS1	92	74.061	Nomascus_leucogenys
ENSPNAG00000003938	pus1	57	30.605	ENSMEUG00000014040	PUS3	52	30.605	Notamacropus_eugenii
ENSPNAG00000003938	pus1	81	62.573	ENSMEUG00000002825	PUS1	92	62.573	Notamacropus_eugenii
ENSPNAG00000003938	pus1	81	63.636	ENSOPRG00000002701	-	89	63.636	Ochotona_princeps
ENSPNAG00000003938	pus1	87	68.392	ENSODEG00000008248	PUS1	86	75.077	Octodon_degus
ENSPNAG00000003938	pus1	88	74.093	ENSONIG00000003803	pus1	97	74.093	Oreochromis_niloticus
ENSPNAG00000003938	pus1	69	30.154	ENSOANG00000000406	PUS3	57	30.154	Ornithorhynchus_anatinus
ENSPNAG00000003938	pus1	83	70.085	ENSOANG00000010619	PUS1	81	69.774	Ornithorhynchus_anatinus
ENSPNAG00000003938	pus1	80	72.619	ENSOCUG00000007310	PUS1	74	72.353	Oryctolagus_cuniculus
ENSPNAG00000003938	pus1	88	73.475	ENSORLG00000010787	pus1	91	73.475	Oryzias_latipes
ENSPNAG00000003938	pus1	88	74.271	ENSORLG00020011483	pus1	91	74.271	Oryzias_latipes_hni
ENSPNAG00000003938	pus1	88	74.536	ENSORLG00015023012	pus1	97	74.536	Oryzias_latipes_hsok
ENSPNAG00000003938	pus1	86	76.986	ENSOMEG00000022655	pus1	86	76.986	Oryzias_melastigma
ENSPNAG00000003938	pus1	81	72.353	ENSOGAG00000008720	PUS1	94	69.505	Otolemur_garnettii
ENSPNAG00000003938	pus1	60	30.241	ENSOARG00000011870	PUS3	54	30.241	Ovis_aries
ENSPNAG00000003938	pus1	82	70.640	ENSOARG00000013316	PUS1	79	70.640	Ovis_aries
ENSPNAG00000003938	pus1	82	73.547	ENSPPAG00000040971	PUS1	81	75.000	Pan_paniscus
ENSPNAG00000003938	pus1	82	71.802	ENSPPRG00000015456	PUS1	87	71.802	Panthera_pardus
ENSPNAG00000003938	pus1	67	30.408	ENSPPRG00000005662	PUS3	59	30.408	Panthera_pardus
ENSPNAG00000003938	pus1	81	71.554	ENSPTIG00000004201	PUS1	89	71.802	Panthera_tigris_altaica
ENSPNAG00000003938	pus1	67	30.094	ENSPTIG00000001192	PUS3	59	30.094	Panthera_tigris_altaica
ENSPNAG00000003938	pus1	90	65.500	ENSPTRG00000005643	PUS1	93	65.500	Pan_troglodytes
ENSPNAG00000003938	pus1	81	72.303	ENSPANG00000000376	PUS1	83	73.927	Papio_anubis
ENSPNAG00000003938	pus1	92	70.455	ENSPKIG00000019369	pus1	93	69.024	Paramormyrops_kingsleyae
ENSPNAG00000003938	pus1	82	71.920	ENSPSIG00000016432	PUS1	81	71.920	Pelodiscus_sinensis
ENSPNAG00000003938	pus1	87	76.423	ENSPMGG00000004522	pus1	96	76.423	Periophthalmus_magnuspinnatus
ENSPNAG00000003938	pus1	92	67.352	ENSPEMG00000013448	Pus1	86	67.352	Peromyscus_maniculatus_bairdii
ENSPNAG00000003938	pus1	60	30.314	ENSPEMG00000009602	Pus3	54	30.314	Peromyscus_maniculatus_bairdii
ENSPNAG00000003938	pus1	77	60.494	ENSPMAG00000004636	pus1	98	60.494	Petromyzon_marinus
ENSPNAG00000003938	pus1	61	30.000	ENSPCIG00000010225	PUS3	58	30.000	Phascolarctos_cinereus
ENSPNAG00000003938	pus1	72	61.311	ENSPCIG00000022609	-	74	59.744	Phascolarctos_cinereus
ENSPNAG00000003938	pus1	96	69.712	ENSPFOG00000019669	pus1	99	69.712	Poecilia_formosa
ENSPNAG00000003938	pus1	96	69.471	ENSPLAG00000002692	-	99	69.471	Poecilia_latipinna
ENSPNAG00000003938	pus1	96	69.471	ENSPLAG00000007185	pus1	99	69.471	Poecilia_latipinna
ENSPNAG00000003938	pus1	95	70.792	ENSPMEG00000006038	pus1	97	73.522	Poecilia_mexicana
ENSPNAG00000003938	pus1	95	70.792	ENSPMEG00000011115	PUS1	98	70.792	Poecilia_mexicana
ENSPNAG00000003938	pus1	90	73.890	ENSPREG00000007231	pus1	99	77.654	Poecilia_reticulata
ENSPNAG00000003938	pus1	87	67.914	ENSPPYG00000005132	PUS1	88	67.914	Pongo_abelii
ENSPNAG00000003938	pus1	60	69.412	ENSPCAG00000009110	-	62	69.412	Procavia_capensis
ENSPNAG00000003938	pus1	76	67.712	ENSPCOG00000015595	PUS1	89	61.878	Propithecus_coquereli
ENSPNAG00000003938	pus1	88	74.474	ENSPNYG00000013571	pus1	90	74.474	Pundamilia_nyererei
ENSPNAG00000003938	pus1	82	72.543	ENSRNOG00000037500	Pus1	82	72.543	Rattus_norvegicus
ENSPNAG00000003938	pus1	74	30.857	ENSRNOG00000012994	Pus3	65	30.857	Rattus_norvegicus
ENSPNAG00000003938	pus1	82	72.384	ENSRBIG00000043177	PUS1	85	74.342	Rhinopithecus_bieti
ENSPNAG00000003938	pus1	82	72.384	ENSRROG00000039744	PUS1	82	75.000	Rhinopithecus_roxellana
ENSPNAG00000003938	pus1	80	44.521	YPL212C	-	60	47.407	Saccharomyces_cerevisiae
ENSPNAG00000003938	pus1	70	31.856	YGL063W	-	95	31.856	Saccharomyces_cerevisiae
ENSPNAG00000003938	pus1	85	69.505	ENSSBOG00000023593	PUS1	92	70.405	Saimiri_boliviensis_boliviensis
ENSPNAG00000003938	pus1	98	61.722	ENSSHAG00000013193	PUS1	96	64.051	Sarcophilus_harrisii
ENSPNAG00000003938	pus1	61	30.667	ENSSHAG00000001382	PUS3	54	30.667	Sarcophilus_harrisii
ENSPNAG00000003938	pus1	92	72.613	ENSSFOG00015003463	pus1	94	71.186	Scleropages_formosus
ENSPNAG00000003938	pus1	84	76.271	ENSSMAG00000019075	pus1	89	73.458	Scophthalmus_maximus
ENSPNAG00000003938	pus1	98	68.706	ENSSDUG00000007102	pus1	100	68.706	Seriola_dumerili
ENSPNAG00000003938	pus1	98	68.235	ENSSLDG00000022850	pus1	100	68.235	Seriola_lalandi_dorsalis
ENSPNAG00000003938	pus1	72	63.607	ENSSARG00000008367	PUS1	99	63.607	Sorex_araneus
ENSPNAG00000003938	pus1	85	72.778	ENSSPUG00000010009	PUS1	89	72.778	Sphenodon_punctatus
ENSPNAG00000003938	pus1	91	72.704	ENSSPAG00000006272	pus1	100	72.704	Stegastes_partitus
ENSPNAG00000003938	pus1	60	30.420	ENSSSCG00000015222	PUS3	54	30.420	Sus_scrofa
ENSPNAG00000003938	pus1	82	71.802	ENSSSCG00000009741	PUS1	86	71.802	Sus_scrofa
ENSPNAG00000003938	pus1	77	76.074	ENSTGUG00000008068	PUS1	99	76.074	Taeniopygia_guttata
ENSPNAG00000003938	pus1	86	73.151	ENSTRUG00000002198	pus1	90	74.929	Takifugu_rubripes
ENSPNAG00000003938	pus1	87	72.703	ENSTNIG00000003942	pus1	93	73.243	Tetraodon_nigroviridis
ENSPNAG00000003938	pus1	60	30.282	ENSTBEG00000004382	PUS3	56	30.282	Tupaia_belangeri
ENSPNAG00000003938	pus1	82	69.767	ENSTTRG00000000632	PUS1	81	69.767	Tursiops_truncatus
ENSPNAG00000003938	pus1	82	71.221	ENSUAMG00000017197	PUS1	87	71.221	Ursus_americanus
ENSPNAG00000003938	pus1	82	70.809	ENSUMAG00000002831	PUS1	95	73.418	Ursus_maritimus
ENSPNAG00000003938	pus1	60	30.928	ENSVPAG00000001495	PUS3	54	30.928	Vicugna_pacos
ENSPNAG00000003938	pus1	67	30.094	ENSVVUG00000020152	PUS3	59	30.094	Vulpes_vulpes
ENSPNAG00000003938	pus1	82	70.058	ENSVVUG00000004199	PUS1	79	70.058	Vulpes_vulpes
ENSPNAG00000003938	pus1	85	69.916	ENSXETG00000002030	pus1	89	69.916	Xenopus_tropicalis
ENSPNAG00000003938	pus1	76	49.221	ENSXETG00000033640	-	100	49.221	Xenopus_tropicalis
ENSPNAG00000003938	pus1	90	75.196	ENSXCOG00000004722	pus1	98	75.862	Xiphophorus_couchianus
ENSPNAG00000003938	pus1	96	69.952	ENSXMAG00000000988	pus1	99	69.952	Xiphophorus_maculatus