EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000004189 (Gene tree)
Gene ID: 108429943
Gene Symbol: rab13
Alias: cb764|hm:zeh0455
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 6001 bases
Position: chrKV575366.1:923947-929947
Accession: 108429943
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000020346	MMR_HSR1	PF01926.23	7.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000030851	-	570	XM_017702029	ENSPNAP00000020346	189 (aa)	XP_017557518	-

Gene Model

Click here to download ENSPNAG00000004189's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000004189's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000004189	rab13	85	37.654	ENSPNAG00000000584	hrasb	85	37.654
ENSPNAG00000004189	rab13	80	39.474	ENSPNAG00000024728	rab23	73	39.474
ENSPNAG00000004189	rab13	90	47.953	ENSPNAG00000010760	rab30	85	47.953
ENSPNAG00000004189	rab13	95	53.073	ENSPNAG00000015810	RAB15	87	53.073
ENSPNAG00000004189	rab13	92	30.220	ENSPNAG00000025619	dnajc27	67	30.220
ENSPNAG00000004189	rab13	89	56.213	ENSPNAG00000013004	rab1ba	84	56.213
ENSPNAG00000004189	rab13	85	37.654	ENSPNAG00000014085	hrasa	85	37.654
ENSPNAG00000004189	rab13	93	37.989	ENSPNAG00000016600	-	86	37.989
ENSPNAG00000004189	rab13	93	44.571	ENSPNAG00000000694	rab25a	84	44.571
ENSPNAG00000004189	rab13	86	38.012	ENSPNAG00000017466	rab38b	80	38.012
ENSPNAG00000004189	rab13	90	42.391	ENSPNAG00000029115	rab33ba	81	42.391
ENSPNAG00000004189	rab13	90	55.882	ENSPNAG00000003227	rab3c	78	55.882
ENSPNAG00000004189	rab13	84	45.122	ENSPNAG00000022929	rab33a	54	45.122
ENSPNAG00000004189	rab13	89	56.805	ENSPNAG00000012540	-	84	56.805
ENSPNAG00000004189	rab13	69	30.534	ENSPNAG00000010083	arl3l2	67	30.534
ENSPNAG00000004189	rab13	95	36.098	ENSPNAG00000021994	rab36	78	36.098
ENSPNAG00000004189	rab13	85	37.423	ENSPNAG00000013747	mras	78	37.423
ENSPNAG00000004189	rab13	95	36.413	ENSPNAG00000028629	kras	96	36.413
ENSPNAG00000004189	rab13	88	36.257	ENSPNAG00000004728	rheb	88	36.257
ENSPNAG00000004189	rab13	85	42.857	ENSPNAG00000028138	rab5c	73	42.857
ENSPNAG00000004189	rab13	89	56.805	ENSPNAG00000029574	zgc:171927	80	56.805
ENSPNAG00000004189	rab13	86	47.853	ENSPNAG00000011548	rab18a	81	47.853
ENSPNAG00000004189	rab13	85	42.236	ENSPNAG00000002218	-	76	42.236
ENSPNAG00000004189	rab13	86	47.853	ENSPNAG00000002404	rab18b	79	47.853
ENSPNAG00000004189	rab13	85	33.333	ENSPNAG00000007710	rasl11a	67	33.333
ENSPNAG00000004189	rab13	77	38.926	ENSPNAG00000015040	rab34b	67	40.000
ENSPNAG00000004189	rab13	98	55.676	ENSPNAG00000011215	rab15	87	55.676
ENSPNAG00000004189	rab13	84	45.570	ENSPNAG00000005519	-	76	43.671
ENSPNAG00000004189	rab13	85	44.720	ENSPNAG00000023223	rab5aa	75	44.720
ENSPNAG00000004189	rab13	89	34.463	ENSPNAG00000028497	si:cabz01085950.1	84	34.463
ENSPNAG00000004189	rab13	93	46.591	ENSPNAG00000006431	-	81	46.591
ENSPNAG00000004189	rab13	87	41.916	ENSPNAG00000016567	rab42a	78	41.916
ENSPNAG00000004189	rab13	94	48.315	ENSPNAG00000015031	rab12	70	48.837
ENSPNAG00000004189	rab13	87	57.927	ENSPNAG00000013863	rab1ab	74	57.927
ENSPNAG00000004189	rab13	94	46.328	ENSPNAG00000029085	rab11al	82	46.328
ENSPNAG00000004189	rab13	75	30.986	ENSPNAG00000027037	arl3	78	30.986
ENSPNAG00000004189	rab13	75	30.986	ENSPNAG00000014755	zgc:110197	79	30.986
ENSPNAG00000004189	rab13	92	38.333	ENSPNAG00000017938	RAB9A	81	38.333
ENSPNAG00000004189	rab13	89	47.619	ENSPNAG00000011193	rab2a	79	47.619
ENSPNAG00000004189	rab13	85	37.423	ENSPNAG00000026295	si:ch73-116o1.2	78	37.423
ENSPNAG00000004189	rab13	90	45.349	ENSPNAG00000013589	rab39bb	81	45.349
ENSPNAG00000004189	rab13	95	51.955	ENSPNAG00000014046	-	88	51.955
ENSPNAG00000004189	rab13	91	46.821	ENSPNAG00000021675	-	80	46.821
ENSPNAG00000004189	rab13	84	44.937	ENSPNAG00000010157	rab6bb	76	44.937
ENSPNAG00000004189	rab13	95	38.919	ENSPNAG00000020583	zgc:100918	90	38.919
ENSPNAG00000004189	rab13	90	45.930	ENSPNAG00000013897	rab39ba	81	45.930
ENSPNAG00000004189	rab13	84	44.304	ENSPNAG00000021737	rab41	75	44.304
ENSPNAG00000004189	rab13	84	44.304	ENSPNAG00000028379	rab6ba	76	44.304
ENSPNAG00000004189	rab13	83	40.625	ENSPNAG00000003179	rab34a	62	40.625
ENSPNAG00000004189	rab13	93	47.159	ENSPNAG00000014863	rab11a	82	47.159
ENSPNAG00000004189	rab13	93	37.989	ENSPNAG00000015164	-	86	37.989
ENSPNAG00000004189	rab13	86	41.667	ENSPNAG00000015161	rab22a	83	41.667
ENSPNAG00000004189	rab13	87	40.237	ENSPNAG00000018132	rab9b	75	40.237
ENSPNAG00000004189	rab13	81	32.680	ENSPNAG00000024254	rabl2	65	32.886
ENSPNAG00000004189	rab13	87	43.636	ENSPNAG00000014363	-	77	43.636
ENSPNAG00000004189	rab13	85	44.099	ENSPNAG00000009496	rab5ab	75	44.099
ENSPNAG00000004189	rab13	93	46.023	ENSPNAG00000020475	rab11ba	81	46.023
ENSPNAG00000004189	rab13	93	43.429	ENSPNAG00000006569	rab25b	83	43.429
ENSPNAG00000004189	rab13	84	42.073	ENSPNAG00000017856	zgc:101559	71	42.073
ENSPNAG00000004189	rab13	86	30.058	ENSPNAG00000001348	rasl11b	69	30.058
ENSPNAG00000004189	rab13	94	49.438	ENSPNAG00000018986	si:dkey-16l2.16	84	49.438
ENSPNAG00000004189	rab13	81	36.129	ENSPNAG00000018361	rras	80	36.129
ENSPNAG00000004189	rab13	86	39.881	ENSPNAG00000007277	RAB9A	79	39.881
ENSPNAG00000004189	rab13	85	40.964	ENSPNAG00000014146	-	78	40.964

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000004189	rab13	92	86.127	ENSG00000143545	RAB13	85	86.127	Homo_sapiens
ENSPNAG00000004189	rab13	95	96.089	ENSACIG00000008584	rab13	86	96.089	Amphilophus_citrinellus
ENSPNAG00000004189	rab13	92	86.705	ENSANAG00000030247	-	85	86.705	Aotus_nancymaae
ENSPNAG00000004189	rab13	93	97.727	ENSAMXG00000030712	rab13	87	97.727	Astyanax_mexicanus
ENSPNAG00000004189	rab13	92	86.127	ENSBTAG00000017604	RAB13	85	86.127	Bos_taurus
ENSPNAG00000004189	rab13	85	48.148	WBGene00019317	K02E10.1	74	48.148	Caenorhabditis_elegans
ENSPNAG00000004189	rab13	95	82.258	ENSCJAG00000009933	-	92	82.258	Callithrix_jacchus
ENSPNAG00000004189	rab13	95	81.720	ENSCHIG00000022271	-	92	81.720	Capra_hircus
ENSPNAG00000004189	rab13	94	83.146	ENSCPOG00000011491	-	88	83.146	Cavia_porcellus
ENSPNAG00000004189	rab13	92	86.127	ENSCCAG00000028502	-	85	86.127	Cebus_capucinus
ENSPNAG00000004189	rab13	92	86.127	ENSCATG00000041779	-	85	86.127	Cercocebus_atys
ENSPNAG00000004189	rab13	94	83.708	ENSCLAG00000006603	-	88	83.708	Chinchilla_lanigera
ENSPNAG00000004189	rab13	92	86.127	ENSCANG00000036573	-	85	86.127	Colobus_angolensis_palliatus
ENSPNAG00000004189	rab13	92	86.127	ENSCGRG00001021505	Rab13	85	86.127	Cricetulus_griseus_chok1gshd
ENSPNAG00000004189	rab13	92	86.127	ENSCGRG00000012126	Rab13	85	86.127	Cricetulus_griseus_crigri
ENSPNAG00000004189	rab13	99	91.192	ENSCSEG00000002358	rab13	95	91.192	Cynoglossus_semilaevis
ENSPNAG00000004189	rab13	94	96.045	ENSDARG00000034771	rab13	89	96.045	Danio_rerio
ENSPNAG00000004189	rab13	92	87.283	ENSDORG00000001591	Rab13	85	87.283	Dipodomys_ordii
ENSPNAG00000004189	rab13	93	84.659	ENSEASG00005000683	-	87	84.659	Equus_asinus_asinus
ENSPNAG00000004189	rab13	93	84.659	ENSECAG00000016551	RAB13	87	84.659	Equus_caballus
ENSPNAG00000004189	rab13	96	77.249	ENSEEUG00000001233	-	93	77.249	Erinaceus_europaeus
ENSPNAG00000004189	rab13	94	95.480	ENSELUG00000012801	rab13	89	95.480	Esox_lucius
ENSPNAG00000004189	rab13	93	83.523	ENSFCAG00000045269	-	87	83.523	Felis_catus
ENSPNAG00000004189	rab13	70	88.636	ENSFDAG00000014469	-	100	88.636	Fukomys_damarensis
ENSPNAG00000004189	rab13	94	94.944	ENSFHEG00000021221	rab13	97	94.944	Fundulus_heteroclitus
ENSPNAG00000004189	rab13	94	94.915	ENSGACG00000011925	rab13	88	94.915	Gasterosteus_aculeatus
ENSPNAG00000004189	rab13	93	85.227	ENSGAGG00000000742	-	88	85.227	Gopherus_agassizii
ENSPNAG00000004189	rab13	92	86.127	ENSGGOG00000023693	RAB13	85	86.127	Gorilla_gorilla
ENSPNAG00000004189	rab13	93	83.523	ENSHGLG00000008749	RAB13	87	83.523	Heterocephalus_glaber_female
ENSPNAG00000004189	rab13	93	83.523	ENSHGLG00100013608	RAB13	87	83.523	Heterocephalus_glaber_male
ENSPNAG00000004189	rab13	95	96.648	ENSHCOG00000007440	rab13	98	96.648	Hippocampus_comes
ENSPNAG00000004189	rab13	95	95.531	ENSIPUG00000003199	rab13	89	95.531	Ictalurus_punctatus
ENSPNAG00000004189	rab13	92	87.283	ENSSTOG00000011222	-	85	87.283	Ictidomys_tridecemlineatus
ENSPNAG00000004189	rab13	94	84.270	ENSJJAG00000010575	Rab13	88	84.270	Jaculus_jaculus
ENSPNAG00000004189	rab13	95	93.855	ENSKMAG00000001908	rab13	100	86.702	Kryptolebias_marmoratus
ENSPNAG00000004189	rab13	94	96.045	ENSLBEG00000026779	rab13	89	96.045	Labrus_bergylta
ENSPNAG00000004189	rab13	94	78.090	ENSLACG00000008103	-	100	78.090	Latimeria_chalumnae
ENSPNAG00000004189	rab13	92	86.127	ENSMFAG00000041018	RAB13	85	86.127	Macaca_fascicularis
ENSPNAG00000004189	rab13	92	86.127	ENSMNEG00000028951	-	85	86.127	Macaca_nemestrina
ENSPNAG00000004189	rab13	92	86.127	ENSMLEG00000042247	-	85	86.127	Mandrillus_leucophaeus
ENSPNAG00000004189	rab13	95	95.531	ENSMAMG00000014602	rab13	89	95.480	Mastacembelus_armatus
ENSPNAG00000004189	rab13	92	86.705	ENSMAUG00000015713	Rab13	85	86.705	Mesocricetus_auratus
ENSPNAG00000004189	rab13	93	85.714	ENSMICG00000010340	-	87	84.659	Microcebus_murinus
ENSPNAG00000004189	rab13	92	86.705	ENSMOCG00000021448	Rab13	85	86.705	Microtus_ochrogaster
ENSPNAG00000004189	rab13	93	85.227	ENSMODG00000017295	-	74	85.227	Monodelphis_domestica
ENSPNAG00000004189	rab13	92	84.393	MGP_CAROLIEiJ_G0025227	Rab13	85	84.393	Mus_caroli
ENSPNAG00000004189	rab13	92	84.393	ENSMUSG00000027935	Rab13	86	84.393	Mus_musculus
ENSPNAG00000004189	rab13	92	84.393	MGP_PahariEiJ_G0026671	Rab13	86	84.393	Mus_pahari
ENSPNAG00000004189	rab13	92	85.549	ENSNGAG00000010309	Rab13	86	85.549	Nannospalax_galili
ENSPNAG00000004189	rab13	94	96.610	ENSNBRG00000004124	rab13	97	89.394	Neolamprologus_brichardi
ENSPNAG00000004189	rab13	93	85.143	ENSNLEG00000028944	-	89	85.143	Nomascus_leucogenys
ENSPNAG00000004189	rab13	93	85.227	ENSMEUG00000009667	-	87	85.227	Notamacropus_eugenii
ENSPNAG00000004189	rab13	67	88.976	ENSODEG00000012634	-	100	88.976	Octodon_degus
ENSPNAG00000004189	rab13	93	83.523	ENSODEG00000010443	-	87	83.523	Octodon_degus
ENSPNAG00000004189	rab13	95	97.765	ENSONIG00000006340	rab13	89	97.765	Oreochromis_niloticus
ENSPNAG00000004189	rab13	92	86.127	ENSOCUG00000006286	-	97	86.127	Oryctolagus_cuniculus
ENSPNAG00000004189	rab13	95	97.765	ENSOMEG00000008210	rab13	89	97.740	Oryzias_melastigma
ENSPNAG00000004189	rab13	93	83.523	ENSOGAG00000016969	-	88	83.523	Otolemur_garnettii
ENSPNAG00000004189	rab13	92	86.127	ENSPPAG00000028435	-	85	86.127	Pan_paniscus
ENSPNAG00000004189	rab13	93	83.523	ENSPPRG00000008865	-	87	83.523	Panthera_pardus
ENSPNAG00000004189	rab13	92	86.127	ENSPTRG00000001370	RAB13	85	86.127	Pan_troglodytes
ENSPNAG00000004189	rab13	92	86.127	ENSPANG00000004479	-	85	86.127	Papio_anubis
ENSPNAG00000004189	rab13	93	94.886	ENSPMGG00000007680	rab13	96	87.692	Periophthalmus_magnuspinnatus
ENSPNAG00000004189	rab13	66	78.788	ENSPEMG00000017353	-	99	78.788	Peromyscus_maniculatus_bairdii
ENSPNAG00000004189	rab13	93	85.227	ENSPCIG00000029350	-	87	85.227	Phascolarctos_cinereus
ENSPNAG00000004189	rab13	97	93.514	ENSPLAG00000005832	RAB13	99	93.514	Poecilia_latipinna
ENSPNAG00000004189	rab13	95	95.531	ENSPREG00000017567	rab13	90	95.531	Poecilia_reticulata
ENSPNAG00000004189	rab13	92	86.127	ENSPPYG00000000790	-	85	86.127	Pongo_abelii
ENSPNAG00000004189	rab13	93	85.227	ENSPCOG00000012189	-	87	85.227	Propithecus_coquereli
ENSPNAG00000004189	rab13	95	81.183	ENSPVAG00000011095	-	92	81.183	Pteropus_vampyrus
ENSPNAG00000004189	rab13	95	81.183	ENSRNOG00000016733	Rab13	92	81.183	Rattus_norvegicus
ENSPNAG00000004189	rab13	92	86.127	ENSRBIG00000008552	-	85	86.127	Rhinopithecus_bieti
ENSPNAG00000004189	rab13	92	86.127	ENSRROG00000036885	-	85	86.127	Rhinopithecus_roxellana
ENSPNAG00000004189	rab13	92	86.127	ENSSBOG00000020342	-	86	86.127	Saimiri_boliviensis_boliviensis
ENSPNAG00000004189	rab13	94	85.311	ENSSHAG00000011866	-	87	85.311	Sarcophilus_harrisii
ENSPNAG00000004189	rab13	95	82.258	ENSSSCG00000006564	-	92	82.258	Sus_scrofa
ENSPNAG00000004189	rab13	94	96.045	ENSTRUG00000024177	rab13	89	96.045	Takifugu_rubripes
ENSPNAG00000004189	rab13	92	86.705	ENSTBEG00000012734	-	85	86.705	Tupaia_belangeri
ENSPNAG00000004189	rab13	95	82.258	ENSTTRG00000011183	-	92	82.258	Tursiops_truncatus
ENSPNAG00000004189	rab13	71	81.481	ENSXETG00000020729	rab13	84	81.481	Xenopus_tropicalis
ENSPNAG00000004189	rab13	96	92.935	ENSXCOG00000019533	rab13	98	92.935	Xiphophorus_couchianus