EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000004246 (Gene tree)
Gene ID: 108432720
Gene Symbol: cpeb1a
Alias: zgc:194449|zgc:194452
Full Name: cytoplasmic polyadenylation element-binding protein 1-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 8703 bases
Position: chrKV575408.1:1878862-1887564
Accession: 108432720
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000020686	RRM_1	PF00076.22	9.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000031434	-	1680	XM_017706764	ENSPNAP00000020686	559 (aa)	XP_017562253	-

Gene Model

Click here to download ENSPNAG00000004246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000004246's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000004246	cpeb1a	93	86.015	ENSAMXG00000014189	cpeb1a	92	86.015	Astyanax_mexicanus
ENSPNAG00000004246	cpeb1a	86	65.644	ENSCVAG00000004909	cpeb1b	98	66.667	Cyprinodon_variegatus
ENSPNAG00000004246	cpeb1a	51	59.364	FBgn0004882	orb	50	59.441	Drosophila_melanogaster
ENSPNAG00000004246	cpeb1a	72	42.926	ENSEBUG00000008914	-	82	42.926	Eptatretus_burgeri
ENSPNAG00000004246	cpeb1a	90	63.514	ENSKMAG00000001929	cpeb1b	94	62.825	Kryptolebias_marmoratus