EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPNAG00000004328 (Gene tree)
Gene ID
108437185
Gene Symbol
srek1
Alias
zgc:100974
Full Name
splicing regulatory glutamic acid and lysine rich protein 1
Gene Type
protein_coding
Species
Pygocentrus_nattereri
Status
putative
Strand
Plus strand
Length
26110 bases
Position
chrKV575513.1:125249-151358
Accession
108437185
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNAP00000021206RRM_1PF00076.226.2e-2212
ENSPNAP00000021206RRM_1PF00076.226.2e-2222
ENSPNAP00000036954RRM_1PF00076.227.1e-2212
ENSPNAP00000036954RRM_1PF00076.227.1e-2222
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNAT00000032310-1823XM_017714110ENSPNAP00000036954518 (aa)XP_017569599UPI0008143CB7
ENSPNAT00000032294-1751-ENSPNAP00000021206494 (aa)--
Gene Model
Click here to download ENSPNAG00000004328's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000004328's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPNAG00000004328srek15740.780ENSPNAG00000018440-9935.662
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNAG00000004328srek15783.392ENSG00000153914SREK110071.429Homo_sapiens
ENSPNAG00000004328srek15445.878ENSG00000116754SRSF116769.767Homo_sapiens
ENSPNAG00000004328srek18260.047ENSAPOG00000023618srek19560.981Acanthochromis_polyacanthus
ENSPNAG00000004328srek15783.746ENSAMEG00000011327SREK19151.549Ailuropoda_melanoleuca
ENSPNAG00000004328srek18164.604ENSAOCG00000024379srek19560.606Amphiprion_ocellaris
ENSPNAG00000004328srek18163.547ENSATEG00000009450srek19560.294Anabas_testudineus
ENSPNAG00000004328srek17871.899ENSAPLG00000003948-9968.657Anas_platyrhynchos
ENSPNAG00000004328srek15745.614ENSACAG00000013654SRSF118940.361Anolis_carolinensis
ENSPNAG00000004328srek15783.392ENSANAG00000031358SREK19283.333Aotus_nancymaae
ENSPNAG00000004328srek15445.878ENSANAG00000018690-8440.763Aotus_nancymaae
ENSPNAG00000004328srek15785.714ENSACLG00000026754srek19685.714Astatotilapia_calliptera
ENSPNAG00000004328srek15743.262ENSAMXG00000008655-8641.379Astyanax_mexicanus
ENSPNAG00000004328srek110080.478ENSAMXG00000043877srek110079.482Astyanax_mexicanus
ENSPNAG00000004328srek15445.520ENSBTAG00000015474SRSF118440.361Bos_taurus
ENSPNAG00000004328srek15784.099ENSBTAG00000007321SREK18584.706Bos_taurus
ENSPNAG00000004328srek15783.392ENSCJAG00000015950SREK19283.333Callithrix_jacchus
ENSPNAG00000004328srek15745.423ENSCJAG00000017704SRSF118437.113Callithrix_jacchus
ENSPNAG00000004328srek15783.746ENSCAFG00000007560SREK18753.478Canis_familiaris
ENSPNAG00000004328srek15645.161ENSCHIG00000025295SRSF117567.416Capra_hircus
ENSPNAG00000004328srek15643.011ENSTSYG00000033270-6865.625Carlito_syrichta
ENSPNAG00000004328srek15783.746ENSTSYG00000036957SREK19281.967Carlito_syrichta
ENSPNAG00000004328srek15444.776ENSCPOG00000009554SRSF118338.163Cavia_porcellus
ENSPNAG00000004328srek15782.867ENSCPOG00000008925SREK18266.520Cavia_porcellus
ENSPNAG00000004328srek16140.694ENSCCAG00000036133-8440.763Cebus_capucinus
ENSPNAG00000004328srek15783.392ENSCCAG00000020591SREK18583.529Cebus_capucinus
ENSPNAG00000004328srek15445.878ENSCATG00000043613SRSF118440.763Cercocebus_atys
ENSPNAG00000004328srek15783.392ENSCATG00000031482SREK19283.333Cercocebus_atys
ENSPNAG00000004328srek15783.217ENSCLAG00000005024SREK17659.836Chinchilla_lanigera
ENSPNAG00000004328srek15445.878ENSCSAG00000001375SRSF118440.763Chlorocebus_sabaeus
ENSPNAG00000004328srek15773.498ENSCHOG00000004956SREK15664.620Choloepus_hoffmanni
ENSPNAG00000004328srek15883.916ENSCPBG00000026866SREK19474.107Chrysemys_picta_bellii
ENSPNAG00000004328srek15750.000ENSCING00000022892-9839.957Ciona_intestinalis
ENSPNAG00000004328srek15445.878ENSCANG00000039796SRSF118440.763Colobus_angolensis_palliatus
ENSPNAG00000004328srek15783.392ENSCANG00000030421SREK19283.333Colobus_angolensis_palliatus
ENSPNAG00000004328srek15781.119ENSCGRG00001015222-7360.707Cricetulus_griseus_chok1gshd
ENSPNAG00000004328srek15644.444ENSCGRG00001012043Srsf118040.918Cricetulus_griseus_chok1gshd
ENSPNAG00000004328srek15781.119ENSCGRG00000002130-7360.707Cricetulus_griseus_crigri
ENSPNAG00000004328srek15643.011ENSCSEG00000010721-8436.694Cynoglossus_semilaevis
ENSPNAG00000004328srek15642.857ENSCVAG00000006934-9735.282Cyprinodon_variegatus
ENSPNAG00000004328srek110070.420ENSDARG00000009764srek110069.962Danio_rerio
ENSPNAG00000004328srek16140.379ENSDNOG00000008603SRSF118440.562Dasypus_novemcinctus
ENSPNAG00000004328srek15783.746ENSDNOG00000010327SREK15377.246Dasypus_novemcinctus
ENSPNAG00000004328srek16140.379ENSDORG00000000669Srsf118440.443Dipodomys_ordii
ENSPNAG00000004328srek15838.462FBgn0024285Srp547535.561Drosophila_melanogaster
ENSPNAG00000004328srek15770.318ENSETEG00000012977SREK16959.716Echinops_telfairi
ENSPNAG00000004328srek15944.138ENSEASG00005007847SRSF117867.416Equus_asinus_asinus
ENSPNAG00000004328srek15744.840ENSECAG00000017756SRSF115242.687Equus_caballus
ENSPNAG00000004328srek15645.520ENSEEUG00000002456SRSF116543.000Erinaceus_europaeus
ENSPNAG00000004328srek15643.011ENSELUG00000021268-9038.780Esox_lucius
ENSPNAG00000004328srek15743.310ENSELUG00000023887srsf118239.388Esox_lucius
ENSPNAG00000004328srek110065.065ENSELUG00000008230srek19968.991Esox_lucius
ENSPNAG00000004328srek15782.867ENSFDAG00000017844SREK17658.990Fukomys_damarensis
ENSPNAG00000004328srek17552.455ENSFHEG00000020971srek19857.975Fundulus_heteroclitus
ENSPNAG00000004328srek15744.170ENSFHEG00000003732SRSF118937.525Fundulus_heteroclitus
ENSPNAG00000004328srek15644.444ENSGALG00000011305SRSF117440.854Gallus_gallus
ENSPNAG00000004328srek15440.714ENSGAFG00000021415SRSF117537.030Gambusia_affinis
ENSPNAG00000004328srek15741.343ENSGACG00000009346srsf119236.948Gasterosteus_aculeatus
ENSPNAG00000004328srek19336.811ENSGACG00000017855-7765.854Gasterosteus_aculeatus
ENSPNAG00000004328srek17970.127ENSGAGG00000006087SREK18076.418Gopherus_agassizii
ENSPNAG00000004328srek15783.392ENSGGOG00000004737SREK19283.333Gorilla_gorilla
ENSPNAG00000004328srek15445.878ENSGGOG00000005774SRSF118440.763Gorilla_gorilla
ENSPNAG00000004328srek16141.139ENSHGLG00000008682SRSF118540.964Heterocephalus_glaber_female
ENSPNAG00000004328srek17266.062ENSHGLG00000001181SREK17658.621Heterocephalus_glaber_female
ENSPNAG00000004328srek16041.083ENSHGLG00100018382SRSF118940.854Heterocephalus_glaber_male
ENSPNAG00000004328srek16472.141ENSHGLG00100003207SREK17659.509Heterocephalus_glaber_male
ENSPNAG00000004328srek15643.214ENSHCOG00000019035-8639.300Hippocampus_comes
ENSPNAG00000004328srek15062.857ENSHCOG00000017240SREK15377.778Hippocampus_comes
ENSPNAG00000004328srek110075.573ENSIPUG00000016851srek110075.048Ictalurus_punctatus
ENSPNAG00000004328srek16140.379ENSSTOG00000008675SRSF118440.748Ictidomys_tridecemlineatus
ENSPNAG00000004328srek15782.867ENSSTOG00000008850SREK18584.706Ictidomys_tridecemlineatus
ENSPNAG00000004328srek15445.520ENSJJAG00000017238Srsf118840.763Jaculus_jaculus
ENSPNAG00000004328srek15739.929ENSKMAG00000009775srsf119136.100Kryptolebias_marmoratus
ENSPNAG00000004328srek15644.803ENSLACG00000006575SRSF118839.200Latimeria_chalumnae
ENSPNAG00000004328srek15786.170ENSLOCG00000010547srek15677.326Lepisosteus_oculatus
ENSPNAG00000004328srek17141.761ENSLOCG00000009617srsf118937.891Lepisosteus_oculatus
ENSPNAG00000004328srek15782.867ENSLAFG00000013853SREK19455.478Loxodonta_africana
ENSPNAG00000004328srek15745.614ENSLAFG00000015882SRSF118640.447Loxodonta_africana
ENSPNAG00000004328srek15445.878ENSMFAG00000043405SRSF118440.763Macaca_fascicularis
ENSPNAG00000004328srek15783.392ENSMFAG00000039823SREK19283.333Macaca_fascicularis
ENSPNAG00000004328srek15445.878ENSMMUG00000013852SRSF118641.118Macaca_mulatta
ENSPNAG00000004328srek15783.392ENSMMUG00000014586SREK17983.721Macaca_mulatta
ENSPNAG00000004328srek15445.878ENSMNEG00000029428SRSF118440.763Macaca_nemestrina
ENSPNAG00000004328srek15783.392ENSMNEG00000030723SREK19283.333Macaca_nemestrina
ENSPNAG00000004328srek15445.878ENSMLEG00000041592SRSF118440.763Mandrillus_leucophaeus
ENSPNAG00000004328srek15783.688ENSMLEG00000039078SREK19283.333Mandrillus_leucophaeus
ENSPNAG00000004328srek15643.571ENSMAMG00000015002-9263.366Mastacembelus_armatus
ENSPNAG00000004328srek15780.769ENSMAUG00000010066-7371.795Mesocricetus_auratus
ENSPNAG00000004328srek15644.444ENSMAUG00000008832Srsf118338.780Mesocricetus_auratus
ENSPNAG00000004328srek15783.746ENSMICG00000034959SREK19283.333Microcebus_murinus
ENSPNAG00000004328srek15745.552ENSMICG00000005537SRSF118338.248Microcebus_murinus
ENSPNAG00000004328srek15644.444ENSMOCG00000011388Srsf118040.918Microtus_ochrogaster
ENSPNAG00000004328srek15781.119ENSMOCG00000001536-7271.795Microtus_ochrogaster
ENSPNAG00000004328srek19650.850ENSMODG00000019665SREK15476.946Monodelphis_domestica
ENSPNAG00000004328srek15642.349ENSMALG00000020833-8937.022Monopterus_albus
ENSPNAG00000004328srek19962.282ENSMALG00000017086srek19889.655Monopterus_albus
ENSPNAG00000004328srek15644.444MGP_CAROLIEiJ_G0025767Srsf118669.767Mus_caroli
ENSPNAG00000004328srek15644.444ENSMUSG00000055436Srsf118569.767Mus_musculus
ENSPNAG00000004328srek15644.444MGP_PahariEiJ_G0027217Srsf118669.767Mus_pahari
ENSPNAG00000004328srek15644.444MGP_SPRETEiJ_G0026719Srsf118669.767Mus_spretus
ENSPNAG00000004328srek15783.392ENSMPUG00000014736SREK15376.946Mustela_putorius_furo
ENSPNAG00000004328srek15445.520ENSMPUG00000000892SRSF118440.562Mustela_putorius_furo
ENSPNAG00000004328srek15645.161ENSMLUG00000026338-8638.340Myotis_lucifugus
ENSPNAG00000004328srek15744.718ENSMLUG00000006203-8541.566Myotis_lucifugus
ENSPNAG00000004328srek15645.520ENSNGAG00000010637Srsf118040.882Nannospalax_galili
ENSPNAG00000004328srek15783.392ENSNLEG00000003827SREK18583.529Nomascus_leucogenys
ENSPNAG00000004328srek15445.878ENSNLEG00000009400SRSF118440.763Nomascus_leucogenys
ENSPNAG00000004328srek15644.086ENSMEUG00000000319SRSF118637.137Notamacropus_eugenii
ENSPNAG00000004328srek15784.452ENSOPRG00000012111SREK16077.545Ochotona_princeps
ENSPNAG00000004328srek16839.031ENSODEG00000006289SRSF118641.118Octodon_degus
ENSPNAG00000004328srek19862.500ENSONIG00000011080srek19964.038Oreochromis_niloticus
ENSPNAG00000004328srek15644.444ENSOANG00000015528SRSF118739.919Ornithorhynchus_anatinus
ENSPNAG00000004328srek15082.937ENSOANG00000005029SREK19353.797Ornithorhynchus_anatinus
ENSPNAG00000004328srek15645.714ENSOCUG00000025440-7341.769Oryctolagus_cuniculus
ENSPNAG00000004328srek15784.452ENSOCUG00000001319SREK15377.844Oryctolagus_cuniculus
ENSPNAG00000004328srek15845.296ENSOCUG00000002001-6842.647Oryctolagus_cuniculus
ENSPNAG00000004328srek15645.357ENSOCUG00000024114-8539.525Oryctolagus_cuniculus
ENSPNAG00000004328srek15743.816ENSORLG00000007753srsf118937.232Oryzias_latipes
ENSPNAG00000004328srek15743.816ENSORLG00020016204srsf118937.743Oryzias_latipes_hni
ENSPNAG00000004328srek15743.816ENSORLG00015011944srsf118937.743Oryzias_latipes_hsok
ENSPNAG00000004328srek15773.944ENSOMEG00000015817srek19758.546Oryzias_melastigma
ENSPNAG00000004328srek15445.357ENSOGAG00000003392SRSF118540.241Otolemur_garnettii
ENSPNAG00000004328srek15445.520ENSOARG00000011887SRSF118540.562Ovis_aries
ENSPNAG00000004328srek15784.099ENSOARG00000006005SREK17061.588Ovis_aries
ENSPNAG00000004328srek15483.929ENSPPAG00000031605SREK19283.333Pan_paniscus
ENSPNAG00000004328srek15445.878ENSPPAG00000036149SRSF118440.763Pan_paniscus
ENSPNAG00000004328srek16042.812ENSPPRG00000002720SRSF118440.361Panthera_pardus
ENSPNAG00000004328srek15783.746ENSPPRG00000024617SREK18584.706Panthera_pardus
ENSPNAG00000004328srek15783.746ENSPTIG00000006608SREK18584.706Panthera_tigris_altaica
ENSPNAG00000004328srek15783.392ENSPTRG00000016936SREK19283.333Pan_troglodytes
ENSPNAG00000004328srek15645.520ENSPTRG00000000852SRSF118440.763Pan_troglodytes
ENSPNAG00000004328srek15445.878ENSPANG00000018677SRSF118440.763Papio_anubis
ENSPNAG00000004328srek15783.392ENSPANG00000008953SREK19283.333Papio_anubis
ENSPNAG00000004328srek19971.538ENSPKIG00000025563srek19871.429Paramormyrops_kingsleyae
ENSPNAG00000004328srek15644.803ENSPSIG00000005152SRSF118740.319Pelodiscus_sinensis
ENSPNAG00000004328srek15644.444ENSPEMG00000014288Srsf118338.780Peromyscus_maniculatus_bairdii
ENSPNAG00000004328srek15781.119ENSPEMG00000024051-9759.752Peromyscus_maniculatus_bairdii
ENSPNAG00000004328srek15645.196ENSPMAG00000004397srsf118738.764Petromyzon_marinus
ENSPNAG00000004328srek15644.444ENSPCIG00000002083SRSF118240.239Phascolarctos_cinereus
ENSPNAG00000004328srek15641.429ENSPREG00000009065SRSF118837.352Poecilia_reticulata
ENSPNAG00000004328srek15783.392ENSPPYG00000015515SREK17762.295Pongo_abelii
ENSPNAG00000004328srek15445.878ENSPPYG00000001245SRSF118440.763Pongo_abelii
ENSPNAG00000004328srek15077.236ENSPCAG00000004955SREK17757.528Procavia_capensis
ENSPNAG00000004328srek15645.126ENSPCOG00000025365SRSF118339.759Propithecus_coquereli
ENSPNAG00000004328srek15783.746ENSPCOG00000026230SREK19283.333Propithecus_coquereli
ENSPNAG00000004328srek15783.746ENSPVAG00000009763SREK15476.246Pteropus_vampyrus
ENSPNAG00000004328srek16762.687ENSPNYG00000007160srek19860.597Pundamilia_nyererei
ENSPNAG00000004328srek15644.444ENSRNOG00000029592Srsf118040.918Rattus_norvegicus
ENSPNAG00000004328srek15445.878ENSRBIG00000042971SRSF117763.000Rhinopithecus_bieti
ENSPNAG00000004328srek15483.392ENSRBIG00000033818SREK19281.081Rhinopithecus_bieti
ENSPNAG00000004328srek15445.878ENSRROG00000039667SRSF118440.763Rhinopithecus_roxellana
ENSPNAG00000004328srek15783.392ENSRROG00000017210SREK19283.333Rhinopithecus_roxellana
ENSPNAG00000004328srek15445.878ENSSBOG00000033461SRSF117763.000Saimiri_boliviensis_boliviensis
ENSPNAG00000004328srek19850.512ENSSBOG00000031230SREK19283.333Saimiri_boliviensis_boliviensis
ENSPNAG00000004328srek15644.444ENSSHAG00000012111SRSF119039.521Sarcophilus_harrisii
ENSPNAG00000004328srek19772.179ENSSFOG00015004995srek19573.152Scleropages_formosus
ENSPNAG00000004328srek15745.230ENSSFOG00015014887srsf118938.310Scleropages_formosus
ENSPNAG00000004328srek19966.194ENSSMAG00000011808srek19863.707Scophthalmus_maximus
ENSPNAG00000004328srek15742.509ENSSMAG00000019897-9035.616Scophthalmus_maximus
ENSPNAG00000004328srek15643.772ENSSLDG00000012105-9163.366Seriola_lalandi_dorsalis
ENSPNAG00000004328srek15882.230ENSSARG00000000795SREK15376.647Sorex_araneus
ENSPNAG00000004328srek15545.614ENSSPUG00000016145SRSF118940.481Sphenodon_punctatus
ENSPNAG00000004328srek15683.871ENSSPUG00000016553SREK18983.871Sphenodon_punctatus
ENSPNAG00000004328srek17470.573ENSTNIG00000013463srek18076.347Tetraodon_nigroviridis
ENSPNAG00000004328srek15083.740ENSTTRG00000009684SREK17760.626Tursiops_truncatus
ENSPNAG00000004328srek15645.520ENSTTRG00000015054SRSF118437.751Tursiops_truncatus
ENSPNAG00000004328srek15783.746ENSUMAG00000008191SREK15377.246Ursus_maritimus
ENSPNAG00000004328srek15445.161ENSUMAG00000006618SRSF119039.960Ursus_maritimus
ENSPNAG00000004328srek15083.333ENSVPAG00000008654SREK15176.451Vicugna_pacos
ENSPNAG00000004328srek15644.444ENSXETG00000012371SRSF116941.278Xenopus_tropicalis
ENSPNAG00000004328srek15773.616ENSXETG00000021460srek19857.884Xenopus_tropicalis
ENSPNAG00000004328srek15641.429ENSXMAG00000019180SRSF117457.983Xiphophorus_maculatus

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