EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000004942 (Gene tree)
Gene ID: 108434949
Gene Symbol: sf3b5
Alias: Splicing factor 3B subunit 10|si:ch211-8a9.5|zgc:92874
Full Name: splicing factor 3b subunit 5
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 261 bases
Position: chrKV575455.1:234262-234522
Accession: 108434949
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000022040	SF3b10	PF07189.11	1.9e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000033890	-	261	XM_017710408	ENSPNAP00000022040	86 (aa)	XP_017565897	UPI0008149AFA

Gene Model

Click here to download ENSPNAG00000004942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000004942's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000004942	sf3b5	99	96.471	ENSG00000169976	SF3B5	99	96.471	Homo_sapiens
ENSPNAG00000004942	sf3b5	100	95.349	ENSAPOG00000001721	sf3b5	100	95.349	Acanthochromis_polyacanthus
ENSPNAG00000004942	sf3b5	100	95.349	ENSACIG00000008106	sf3b5	100	95.349	Amphilophus_citrinellus
ENSPNAG00000004942	sf3b5	100	95.349	ENSAOCG00000023367	sf3b5	100	95.349	Amphiprion_ocellaris
ENSPNAG00000004942	sf3b5	100	95.349	ENSAPEG00000004605	sf3b5	100	95.349	Amphiprion_percula
ENSPNAG00000004942	sf3b5	100	96.512	ENSATEG00000009720	sf3b5	100	96.512	Anabas_testudineus
ENSPNAG00000004942	sf3b5	100	93.023	ENSACAG00000007948	SF3B5	100	93.023	Anolis_carolinensis
ENSPNAG00000004942	sf3b5	99	96.471	ENSANAG00000019999	SF3B5	99	96.471	Aotus_nancymaae
ENSPNAG00000004942	sf3b5	100	95.349	ENSACLG00000022410	sf3b5	100	95.349	Astatotilapia_calliptera
ENSPNAG00000004942	sf3b5	99	96.471	ENSBTAG00000009795	SF3B5	99	96.471	Bos_taurus
ENSPNAG00000004942	sf3b5	99	96.471	ENSCJAG00000046566	SF3B5	99	96.471	Callithrix_jacchus
ENSPNAG00000004942	sf3b5	99	96.471	ENSCAFG00000032495	SF3B5	99	96.471	Canis_familiaris
ENSPNAG00000004942	sf3b5	99	96.471	ENSCAFG00020000873	SF3B5	99	96.471	Canis_lupus_dingo
ENSPNAG00000004942	sf3b5	99	96.471	ENSCHIG00000007987	SF3B5	99	96.471	Capra_hircus
ENSPNAG00000004942	sf3b5	99	96.471	ENSTSYG00000012236	SF3B5	99	96.471	Carlito_syrichta
ENSPNAG00000004942	sf3b5	99	96.471	ENSCPOG00000012435	SF3B5	99	96.471	Cavia_porcellus
ENSPNAG00000004942	sf3b5	99	96.471	ENSCCAG00000006528	SF3B5	99	96.471	Cebus_capucinus
ENSPNAG00000004942	sf3b5	99	96.471	ENSCATG00000010192	SF3B5	99	96.471	Cercocebus_atys
ENSPNAG00000004942	sf3b5	99	96.471	ENSCLAG00000017802	SF3B5	99	96.471	Chinchilla_lanigera
ENSPNAG00000004942	sf3b5	99	96.471	ENSCSAG00000000187	SF3B5	99	96.471	Chlorocebus_sabaeus
ENSPNAG00000004942	sf3b5	100	95.349	ENSCPBG00000017148	SF3B5	100	95.349	Chrysemys_picta_bellii
ENSPNAG00000004942	sf3b5	97	75.904	ENSCING00000021953	-	97	75.904	Ciona_intestinalis
ENSPNAG00000004942	sf3b5	99	96.471	ENSCANG00000002639	SF3B5	99	96.471	Colobus_angolensis_palliatus
ENSPNAG00000004942	sf3b5	99	95.294	ENSCGRG00001007249	Sf3b5	99	95.294	Cricetulus_griseus_chok1gshd
ENSPNAG00000004942	sf3b5	99	95.294	ENSCGRG00000019185	Sf3b5	99	95.294	Cricetulus_griseus_crigri
ENSPNAG00000004942	sf3b5	100	95.349	ENSCSEG00000003216	sf3b5	100	95.349	Cynoglossus_semilaevis
ENSPNAG00000004942	sf3b5	100	96.512	ENSCVAG00000005040	sf3b5	100	96.512	Cyprinodon_variegatus
ENSPNAG00000004942	sf3b5	100	96.512	ENSDARG00000016855	sf3b5	100	96.512	Danio_rerio
ENSPNAG00000004942	sf3b5	99	96.471	ENSDNOG00000048829	SF3B5	81	96.471	Dasypus_novemcinctus
ENSPNAG00000004942	sf3b5	99	96.471	ENSDORG00000005838	Sf3b5	99	96.471	Dipodomys_ordii
ENSPNAG00000004942	sf3b5	99	84.706	FBgn0040534	Sf3b5	100	84.706	Drosophila_melanogaster
ENSPNAG00000004942	sf3b5	99	96.471	ENSETEG00000004047	SF3B5	99	96.471	Echinops_telfairi
ENSPNAG00000004942	sf3b5	99	83.529	ENSEBUG00000002311	sf3b5	100	83.529	Eptatretus_burgeri
ENSPNAG00000004942	sf3b5	99	96.471	ENSEASG00005009522	SF3B5	99	96.471	Equus_asinus_asinus
ENSPNAG00000004942	sf3b5	99	96.471	ENSECAG00000005457	SF3B5	99	96.471	Equus_caballus
ENSPNAG00000004942	sf3b5	100	95.349	ENSELUG00000014290	SF3B5	100	95.349	Esox_lucius
ENSPNAG00000004942	sf3b5	99	96.471	ENSFCAG00000000936	SF3B5	99	96.471	Felis_catus
ENSPNAG00000004942	sf3b5	100	91.860	ENSFALG00000015012	SF3B5	100	91.860	Ficedula_albicollis
ENSPNAG00000004942	sf3b5	99	96.471	ENSFDAG00000003664	SF3B5	99	96.471	Fukomys_damarensis
ENSPNAG00000004942	sf3b5	100	96.512	ENSFHEG00000020301	sf3b5	100	96.512	Fundulus_heteroclitus
ENSPNAG00000004942	sf3b5	100	96.512	ENSGMOG00000019972	sf3b5	100	96.512	Gadus_morhua
ENSPNAG00000004942	sf3b5	100	94.186	ENSGALG00000030824	SF3B5	100	94.186	Gallus_gallus
ENSPNAG00000004942	sf3b5	100	96.512	ENSGAFG00000000271	sf3b5	100	96.512	Gambusia_affinis
ENSPNAG00000004942	sf3b5	100	96.512	ENSGACG00000010363	sf3b5	100	96.512	Gasterosteus_aculeatus
ENSPNAG00000004942	sf3b5	100	95.349	ENSGAGG00000011434	SF3B5	100	95.349	Gopherus_agassizii
ENSPNAG00000004942	sf3b5	100	89.535	ENSGAGG00000000646	-	100	89.535	Gopherus_agassizii
ENSPNAG00000004942	sf3b5	99	96.471	ENSGGOG00000001537	SF3B5	99	96.471	Gorilla_gorilla
ENSPNAG00000004942	sf3b5	100	95.349	ENSHBUG00000008925	sf3b5	100	95.349	Haplochromis_burtoni
ENSPNAG00000004942	sf3b5	99	96.471	ENSHGLG00000021406	SF3B5	99	96.471	Heterocephalus_glaber_female
ENSPNAG00000004942	sf3b5	99	96.471	ENSHGLG00100020370	SF3B5	99	96.471	Heterocephalus_glaber_male
ENSPNAG00000004942	sf3b5	100	95.349	ENSHCOG00000009115	-	100	95.349	Hippocampus_comes
ENSPNAG00000004942	sf3b5	100	95.349	ENSHCOG00000016802	sf3b5	100	95.349	Hippocampus_comes
ENSPNAG00000004942	sf3b5	100	95.349	ENSHCOG00000016806	sf3b5	100	95.349	Hippocampus_comes
ENSPNAG00000004942	sf3b5	100	98.837	ENSIPUG00000015166	sf3b5	100	98.837	Ictalurus_punctatus
ENSPNAG00000004942	sf3b5	99	96.471	ENSSTOG00000003347	SF3B5	99	96.471	Ictidomys_tridecemlineatus
ENSPNAG00000004942	sf3b5	99	96.471	ENSJJAG00000001857	Sf3b5	99	96.471	Jaculus_jaculus
ENSPNAG00000004942	sf3b5	100	96.512	ENSKMAG00000002249	sf3b5	100	96.512	Kryptolebias_marmoratus
ENSPNAG00000004942	sf3b5	100	96.512	ENSLBEG00000019847	sf3b5	100	96.512	Labrus_bergylta
ENSPNAG00000004942	sf3b5	100	93.023	ENSLACG00000000946	SF3B5	100	93.023	Latimeria_chalumnae
ENSPNAG00000004942	sf3b5	100	97.674	ENSLOCG00000017352	sf3b5	100	97.674	Lepisosteus_oculatus
ENSPNAG00000004942	sf3b5	99	96.471	ENSLAFG00000032489	SF3B5	99	96.471	Loxodonta_africana
ENSPNAG00000004942	sf3b5	99	96.471	ENSMFAG00000029753	SF3B5	99	96.471	Macaca_fascicularis
ENSPNAG00000004942	sf3b5	99	96.471	ENSMMUG00000047691	SF3B5	99	96.471	Macaca_mulatta
ENSPNAG00000004942	sf3b5	99	96.471	ENSMNEG00000028236	SF3B5	99	96.471	Macaca_nemestrina
ENSPNAG00000004942	sf3b5	99	96.471	ENSMLEG00000007622	SF3B5	99	96.471	Mandrillus_leucophaeus
ENSPNAG00000004942	sf3b5	100	97.674	ENSMAMG00000021639	sf3b5	100	97.674	Mastacembelus_armatus
ENSPNAG00000004942	sf3b5	100	95.349	ENSMZEG00005028115	SF3B5	100	95.349	Maylandia_zebra
ENSPNAG00000004942	sf3b5	100	95.349	ENSMZEG00005027408	sf3b5	100	95.349	Maylandia_zebra
ENSPNAG00000004942	sf3b5	100	84.884	ENSMZEG00005027407	sf3b5	100	84.884	Maylandia_zebra
ENSPNAG00000004942	sf3b5	100	94.186	ENSMGAG00000015849	SF3B5	100	94.186	Meleagris_gallopavo
ENSPNAG00000004942	sf3b5	99	95.294	ENSMAUG00000008283	Sf3b5	99	95.294	Mesocricetus_auratus
ENSPNAG00000004942	sf3b5	99	96.471	ENSMICG00000014922	SF3B5	99	96.471	Microcebus_murinus
ENSPNAG00000004942	sf3b5	99	95.294	ENSMOCG00000001713	Sf3b5	99	95.294	Microtus_ochrogaster
ENSPNAG00000004942	sf3b5	100	97.674	ENSMMOG00000007956	sf3b5	100	97.674	Mola_mola
ENSPNAG00000004942	sf3b5	99	96.471	ENSMODG00000023291	SF3B5	83	96.471	Monodelphis_domestica
ENSPNAG00000004942	sf3b5	91	93.827	ENSMALG00000020357	sf3b5	99	93.827	Monopterus_albus
ENSPNAG00000004942	sf3b5	99	95.294	MGP_CAROLIEiJ_G0015120	Sf3b5	99	95.294	Mus_caroli
ENSPNAG00000004942	sf3b5	99	95.294	ENSMUSG00000078348	Sf3b5	99	95.294	Mus_musculus
ENSPNAG00000004942	sf3b5	99	95.294	MGP_PahariEiJ_G0023739	Sf3b5	99	95.294	Mus_pahari
ENSPNAG00000004942	sf3b5	99	95.294	MGP_SPRETEiJ_G0015928	Sf3b5	99	95.294	Mus_spretus
ENSPNAG00000004942	sf3b5	99	96.471	ENSMPUG00000018379	SF3B5	99	96.471	Mustela_putorius_furo
ENSPNAG00000004942	sf3b5	99	91.765	ENSMLUG00000010802	-	99	91.765	Myotis_lucifugus
ENSPNAG00000004942	sf3b5	99	96.471	ENSMLUG00000028504	-	99	96.471	Myotis_lucifugus
ENSPNAG00000004942	sf3b5	93	93.750	ENSMLUG00000025546	-	93	93.750	Myotis_lucifugus
ENSPNAG00000004942	sf3b5	99	96.471	ENSNGAG00000010732	Sf3b5	99	96.471	Nannospalax_galili
ENSPNAG00000004942	sf3b5	100	95.349	ENSNBRG00000014383	sf3b5	100	95.349	Neolamprologus_brichardi
ENSPNAG00000004942	sf3b5	99	96.471	ENSNLEG00000019307	SF3B5	99	96.471	Nomascus_leucogenys
ENSPNAG00000004942	sf3b5	99	96.471	ENSMEUG00000005440	-	99	96.471	Notamacropus_eugenii
ENSPNAG00000004942	sf3b5	99	96.471	ENSMEUG00000005445	-	99	96.471	Notamacropus_eugenii
ENSPNAG00000004942	sf3b5	99	95.294	ENSOPRG00000015107	SF3B5	99	95.294	Ochotona_princeps
ENSPNAG00000004942	sf3b5	99	96.471	ENSODEG00000019507	SF3B5	99	96.471	Octodon_degus
ENSPNAG00000004942	sf3b5	100	95.349	ENSONIG00000020725	sf3b5	100	95.349	Oreochromis_niloticus
ENSPNAG00000004942	sf3b5	67	96.552	ENSOANG00000015301	SF3B5	95	96.552	Ornithorhynchus_anatinus
ENSPNAG00000004942	sf3b5	99	96.471	ENSOCUG00000008752	SF3B5	99	96.471	Oryctolagus_cuniculus
ENSPNAG00000004942	sf3b5	100	98.837	ENSORLG00000004925	sf3b5	100	98.837	Oryzias_latipes
ENSPNAG00000004942	sf3b5	100	98.837	ENSORLG00020011625	sf3b5	100	98.837	Oryzias_latipes_hni
ENSPNAG00000004942	sf3b5	100	98.837	ENSORLG00015017061	sf3b5	100	98.837	Oryzias_latipes_hsok
ENSPNAG00000004942	sf3b5	100	98.837	ENSOMEG00000010620	sf3b5	100	98.837	Oryzias_melastigma
ENSPNAG00000004942	sf3b5	99	96.471	ENSOGAG00000012152	SF3B5	99	96.471	Otolemur_garnettii
ENSPNAG00000004942	sf3b5	99	92.941	ENSOARG00000002617	SF3B5	99	92.941	Ovis_aries
ENSPNAG00000004942	sf3b5	92	96.203	ENSOARG00000019486	-	95	96.203	Ovis_aries
ENSPNAG00000004942	sf3b5	99	96.471	ENSPPAG00000012940	SF3B5	99	96.471	Pan_paniscus
ENSPNAG00000004942	sf3b5	99	96.471	ENSPPRG00000021262	SF3B5	99	96.471	Panthera_pardus
ENSPNAG00000004942	sf3b5	99	96.471	ENSPTIG00000001952	SF3B5	99	96.471	Panthera_tigris_altaica
ENSPNAG00000004942	sf3b5	99	96.471	ENSPTRG00000018676	SF3B5	99	96.471	Pan_troglodytes
ENSPNAG00000004942	sf3b5	99	96.471	ENSPANG00000034242	SF3B5	99	96.471	Papio_anubis
ENSPNAG00000004942	sf3b5	100	97.674	ENSPKIG00000006057	sf3b5	100	97.674	Paramormyrops_kingsleyae
ENSPNAG00000004942	sf3b5	100	95.349	ENSPSIG00000001262	SF3B5	100	95.349	Pelodiscus_sinensis
ENSPNAG00000004942	sf3b5	100	95.349	ENSPMGG00000014804	sf3b5	100	95.349	Periophthalmus_magnuspinnatus
ENSPNAG00000004942	sf3b5	99	95.294	ENSPEMG00000012931	Sf3b5	99	95.294	Peromyscus_maniculatus_bairdii
ENSPNAG00000004942	sf3b5	100	91.860	ENSPMAG00000010296	sf3b5	100	91.860	Petromyzon_marinus
ENSPNAG00000004942	sf3b5	93	97.500	ENSPCIG00000011344	-	78	97.500	Phascolarctos_cinereus
ENSPNAG00000004942	sf3b5	99	75.294	ENSPCIG00000025007	-	99	75.294	Phascolarctos_cinereus
ENSPNAG00000004942	sf3b5	100	96.512	ENSPFOG00000019994	sf3b5	100	96.512	Poecilia_formosa
ENSPNAG00000004942	sf3b5	100	96.512	ENSPLAG00000008412	sf3b5	100	96.512	Poecilia_latipinna
ENSPNAG00000004942	sf3b5	100	96.512	ENSPMEG00000020050	sf3b5	100	96.512	Poecilia_mexicana
ENSPNAG00000004942	sf3b5	100	96.512	ENSPREG00000009242	sf3b5	100	96.512	Poecilia_reticulata
ENSPNAG00000004942	sf3b5	99	96.471	ENSPPYG00000017068	SF3B5	99	96.471	Pongo_abelii
ENSPNAG00000004942	sf3b5	99	96.471	ENSPCAG00000009332	SF3B5	99	96.471	Procavia_capensis
ENSPNAG00000004942	sf3b5	99	96.471	ENSPCOG00000013754	SF3B5	99	96.471	Propithecus_coquereli
ENSPNAG00000004942	sf3b5	56	97.917	ENSPVAG00000002820	SF3B5	100	97.917	Pteropus_vampyrus
ENSPNAG00000004942	sf3b5	100	95.349	ENSPNYG00000002075	sf3b5	100	95.349	Pundamilia_nyererei
ENSPNAG00000004942	sf3b5	99	95.294	ENSRNOG00000014908	Sf3b5	99	95.294	Rattus_norvegicus
ENSPNAG00000004942	sf3b5	99	96.471	ENSRBIG00000006301	SF3B5	99	96.471	Rhinopithecus_bieti
ENSPNAG00000004942	sf3b5	99	96.471	ENSRROG00000037067	SF3B5	99	96.471	Rhinopithecus_roxellana
ENSPNAG00000004942	sf3b5	99	96.471	ENSSBOG00000006122	SF3B5	99	96.471	Saimiri_boliviensis_boliviensis
ENSPNAG00000004942	sf3b5	99	95.294	ENSSHAG00000015670	SF3B5	99	95.294	Sarcophilus_harrisii
ENSPNAG00000004942	sf3b5	100	96.512	ENSSFOG00015015767	sf3b5	100	96.512	Scleropages_formosus
ENSPNAG00000004942	sf3b5	100	95.349	ENSSMAG00000018852	sf3b5	100	95.349	Scophthalmus_maximus
ENSPNAG00000004942	sf3b5	100	96.512	ENSSDUG00000018161	sf3b5	100	96.512	Seriola_dumerili
ENSPNAG00000004942	sf3b5	100	96.512	ENSSLDG00000014547	sf3b5	100	96.512	Seriola_lalandi_dorsalis
ENSPNAG00000004942	sf3b5	99	96.471	ENSSARG00000007820	SF3B5	99	96.471	Sorex_araneus
ENSPNAG00000004942	sf3b5	100	95.349	ENSSPAG00000017371	-	100	95.349	Stegastes_partitus
ENSPNAG00000004942	sf3b5	100	95.349	ENSSPAG00000009244	sf3b5	100	95.349	Stegastes_partitus
ENSPNAG00000004942	sf3b5	99	96.471	ENSSSCG00000035578	SF3B5	99	96.471	Sus_scrofa
ENSPNAG00000004942	sf3b5	100	94.186	ENSTGUG00000010810	SF3B5	100	94.186	Taeniopygia_guttata
ENSPNAG00000004942	sf3b5	100	94.186	ENSTRUG00000005577	sf3b5	100	94.186	Takifugu_rubripes
ENSPNAG00000004942	sf3b5	100	94.186	ENSTNIG00000001265	sf3b5	100	94.186	Tetraodon_nigroviridis
ENSPNAG00000004942	sf3b5	99	97.647	ENSTBEG00000003072	SF3B5	99	97.647	Tupaia_belangeri
ENSPNAG00000004942	sf3b5	99	96.471	ENSTTRG00000008817	SF3B5	99	96.471	Tursiops_truncatus
ENSPNAG00000004942	sf3b5	99	96.471	ENSUAMG00000027296	SF3B5	99	96.471	Ursus_americanus
ENSPNAG00000004942	sf3b5	99	96.471	ENSUMAG00000005448	SF3B5	99	96.471	Ursus_maritimus
ENSPNAG00000004942	sf3b5	99	96.471	ENSVPAG00000003826	SF3B5	99	96.471	Vicugna_pacos
ENSPNAG00000004942	sf3b5	99	96.471	ENSVVUG00000004703	SF3B5	99	96.471	Vulpes_vulpes
ENSPNAG00000004942	sf3b5	100	94.186	ENSXETG00000021409	sf3b5	100	94.186	Xenopus_tropicalis
ENSPNAG00000004942	sf3b5	100	96.512	ENSXMAG00000019971	sf3b5	100	96.512	Xiphophorus_maculatus