EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000005290 (Gene tree)
Gene ID: 108433261
Gene Symbol: smfn
Alias: zgc:73191
Full Name: RNA exonuclease 2
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 11081 bases
Position: chrKV575418.1:674235-685315
Accession: 108433261
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000002108	RNase_T	PF00929.24	4e-33	1	1
ENSPNAP00000002105	RNase_T	PF00929.24	2.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000011001	-	1349	-	ENSPNAP00000002105	282 (aa)	-	-
ENSPNAT00000011004	-	1316	XM_017707707	ENSPNAP00000002108	271 (aa)	XP_017563196	UPI0008144E62

Gene Model

Click here to download ENSPNAG00000005290's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000005290's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000005290	smfn	79	78.140	ENSG00000076043	REXO2	98	83.152	Homo_sapiens
ENSPNAG00000005290	smfn	79	77.674	ENSAMEG00000013263	REXO2	82	83.077	Ailuropoda_melanoleuca
ENSPNAG00000005290	smfn	67	85.083	ENSACIG00000023553	smfn	97	85.083	Amphilophus_citrinellus
ENSPNAG00000005290	smfn	56	71.519	ENSAOCG00000011565	smfn	96	71.519	Amphiprion_ocellaris
ENSPNAG00000005290	smfn	89	72.917	ENSAPEG00000012435	smfn	71	85.417	Amphiprion_percula
ENSPNAG00000005290	smfn	96	67.037	ENSATEG00000015385	smfn	69	84.375	Anabas_testudineus
ENSPNAG00000005290	smfn	70	80.423	ENSAPLG00000005045	REXO2	92	80.423	Anas_platyrhynchos
ENSPNAG00000005290	smfn	68	73.770	ENSACAG00000011631	REXO2	86	73.770	Anolis_carolinensis
ENSPNAG00000005290	smfn	79	78.140	ENSANAG00000020834	REXO2	82	83.590	Aotus_nancymaae
ENSPNAG00000005290	smfn	97	65.649	ENSACLG00000024566	smfn	96	79.891	Astatotilapia_calliptera
ENSPNAG00000005290	smfn	76	80.193	ENSBTAG00000005843	REXO2	82	83.077	Bos_taurus
ENSPNAG00000005290	smfn	69	46.524	WBGene00007429	C08B6.8	88	53.623	Caenorhabditis_elegans
ENSPNAG00000005290	smfn	79	77.209	ENSCJAG00000012434	REXO2	82	82.564	Callithrix_jacchus
ENSPNAG00000005290	smfn	84	73.160	ENSCAFG00000013511	REXO2	82	82.051	Canis_familiaris
ENSPNAG00000005290	smfn	84	74.026	ENSCAFG00020002513	REXO2	82	83.077	Canis_lupus_dingo
ENSPNAG00000005290	smfn	79	78.140	ENSCHIG00000009264	REXO2	82	83.077	Capra_hircus
ENSPNAG00000005290	smfn	70	72.251	ENSTSYG00000027948	-	98	72.251	Carlito_syrichta
ENSPNAG00000005290	smfn	76	80.193	ENSTSYG00000002237	REXO2	82	83.077	Carlito_syrichta
ENSPNAG00000005290	smfn	68	83.696	ENSCAPG00000006093	REXO2	98	83.696	Cavia_aperea
ENSPNAG00000005290	smfn	79	78.605	ENSCPOG00000010548	REXO2	82	83.590	Cavia_porcellus
ENSPNAG00000005290	smfn	79	77.674	ENSCCAG00000034979	REXO2	82	83.077	Cebus_capucinus
ENSPNAG00000005290	smfn	84	74.026	ENSCATG00000015278	REXO2	82	83.077	Cercocebus_atys
ENSPNAG00000005290	smfn	84	74.783	ENSCLAG00000011195	REXO2	83	83.590	Chinchilla_lanigera
ENSPNAG00000005290	smfn	84	74.459	ENSCSAG00000002754	REXO2	82	83.590	Chlorocebus_sabaeus
ENSPNAG00000005290	smfn	75	79.902	ENSCHOG00000000642	-	82	82.051	Choloepus_hoffmanni
ENSPNAG00000005290	smfn	52	77.143	ENSCPBG00000009359	REXO2	97	77.143	Chrysemys_picta_bellii
ENSPNAG00000005290	smfn	65	59.429	ENSCING00000009858	-	84	59.429	Ciona_intestinalis
ENSPNAG00000005290	smfn	84	74.026	ENSCANG00000034756	REXO2	82	83.077	Colobus_angolensis_palliatus
ENSPNAG00000005290	smfn	82	76.786	ENSCGRG00001019814	-	82	84.103	Cricetulus_griseus_chok1gshd
ENSPNAG00000005290	smfn	74	81.000	ENSCGRG00001013673	-	95	82.051	Cricetulus_griseus_chok1gshd
ENSPNAG00000005290	smfn	74	80.500	ENSCGRG00001010922	-	95	81.538	Cricetulus_griseus_chok1gshd
ENSPNAG00000005290	smfn	82	76.786	ENSCGRG00000006235	Rexo2	82	84.103	Cricetulus_griseus_crigri
ENSPNAG00000005290	smfn	97	71.053	ENSCSEG00000007214	smfn	83	74.694	Cynoglossus_semilaevis
ENSPNAG00000005290	smfn	68	79.781	ENSCVAG00000012008	smfn	99	79.781	Cyprinodon_variegatus
ENSPNAG00000005290	smfn	77	80.383	ENSDARG00000009806	smfn	73	85.938	Danio_rerio
ENSPNAG00000005290	smfn	66	83.333	ENSDNOG00000046533	REXO2	82	85.965	Dasypus_novemcinctus
ENSPNAG00000005290	smfn	79	78.605	ENSDORG00000011255	Rexo2	82	83.590	Dipodomys_ordii
ENSPNAG00000005290	smfn	70	64.921	ENSDORG00000025142	-	83	64.921	Dipodomys_ordii
ENSPNAG00000005290	smfn	68	53.005	FBgn0039115	CG10214	84	53.371	Drosophila_melanogaster
ENSPNAG00000005290	smfn	73	72.864	ENSEBUG00000013964	REXO2	68	72.864	Eptatretus_burgeri
ENSPNAG00000005290	smfn	84	74.026	ENSEASG00005006674	REXO2	97	74.026	Equus_asinus_asinus
ENSPNAG00000005290	smfn	84	74.026	ENSECAG00000005988	REXO2	97	74.026	Equus_caballus
ENSPNAG00000005290	smfn	79	83.645	ENSELUG00000020072	smfn	69	87.879	Esox_lucius
ENSPNAG00000005290	smfn	79	78.140	ENSFCAG00000018632	REXO2	82	83.077	Felis_catus
ENSPNAG00000005290	smfn	68	81.522	ENSFALG00000010044	REXO2	91	81.522	Ficedula_albicollis
ENSPNAG00000005290	smfn	84	74.026	ENSFDAG00000011764	REXO2	82	83.590	Fukomys_damarensis
ENSPNAG00000005290	smfn	70	86.387	ENSGMOG00000006370	smfn	95	88.043	Gadus_morhua
ENSPNAG00000005290	smfn	79	77.570	ENSGALG00000035980	REXO2	92	77.570	Gallus_gallus
ENSPNAG00000005290	smfn	81	74.886	ENSGAFG00000015349	smfn	70	80.000	Gambusia_affinis
ENSPNAG00000005290	smfn	70	82.540	ENSGACG00000020096	smfn	93	82.540	Gasterosteus_aculeatus
ENSPNAG00000005290	smfn	75	78.218	ENSGAGG00000021126	REXO2	84	80.928	Gopherus_agassizii
ENSPNAG00000005290	smfn	79	78.140	ENSGGOG00000023267	REXO2	82	83.077	Gorilla_gorilla
ENSPNAG00000005290	smfn	85	74.569	ENSHGLG00000013556	REXO2	98	74.569	Heterocephalus_glaber_female
ENSPNAG00000005290	smfn	85	75.000	ENSHGLG00100005257	REXO2	98	75.000	Heterocephalus_glaber_male
ENSPNAG00000005290	smfn	66	77.222	ENSHCOG00000007122	smfn	98	77.222	Hippocampus_comes
ENSPNAG00000005290	smfn	98	74.436	ENSIPUG00000020440	rexo2	96	74.436	Ictalurus_punctatus
ENSPNAG00000005290	smfn	76	80.676	ENSSTOG00000012465	REXO2	82	83.590	Ictidomys_tridecemlineatus
ENSPNAG00000005290	smfn	84	54.545	ENSJJAG00000022605	-	97	54.113	Jaculus_jaculus
ENSPNAG00000005290	smfn	79	78.605	ENSJJAG00000013710	-	82	83.590	Jaculus_jaculus
ENSPNAG00000005290	smfn	80	77.778	ENSKMAG00000016795	smfn	76	77.315	Kryptolebias_marmoratus
ENSPNAG00000005290	smfn	67	85.635	ENSLBEG00000006021	smfn	96	85.635	Labrus_bergylta
ENSPNAG00000005290	smfn	79	68.182	ENSLACG00000018623	REXO2	79	74.611	Latimeria_chalumnae
ENSPNAG00000005290	smfn	75	86.700	ENSLOCG00000002389	smfn	92	88.660	Lepisosteus_oculatus
ENSPNAG00000005290	smfn	73	83.249	ENSLAFG00000012451	REXO2	82	83.077	Loxodonta_africana
ENSPNAG00000005290	smfn	84	74.026	ENSMFAG00000041155	REXO2	82	83.077	Macaca_fascicularis
ENSPNAG00000005290	smfn	84	74.026	ENSMMUG00000012269	REXO2	82	83.077	Macaca_mulatta
ENSPNAG00000005290	smfn	84	74.026	ENSMNEG00000033379	REXO2	82	83.077	Macaca_nemestrina
ENSPNAG00000005290	smfn	84	74.026	ENSMLEG00000036571	REXO2	82	83.077	Mandrillus_leucophaeus
ENSPNAG00000005290	smfn	74	81.095	ENSMAMG00000021209	smfn	70	82.474	Mastacembelus_armatus
ENSPNAG00000005290	smfn	97	65.649	ENSMZEG00005023224	-	93	65.267	Maylandia_zebra
ENSPNAG00000005290	smfn	97	65.649	ENSMZEG00005020730	REXO2	93	65.267	Maylandia_zebra
ENSPNAG00000005290	smfn	59	78.395	ENSMGAG00000003026	REXO2	99	78.395	Meleagris_gallopavo
ENSPNAG00000005290	smfn	82	76.786	ENSMAUG00000014576	Rexo2	82	84.103	Mesocricetus_auratus
ENSPNAG00000005290	smfn	84	74.892	ENSMICG00000010094	REXO2	97	75.325	Microcebus_murinus
ENSPNAG00000005290	smfn	75	81.863	ENSMOCG00000009016	Rexo2	82	84.103	Microtus_ochrogaster
ENSPNAG00000005290	smfn	75	78.218	ENSMMOG00000006430	smfn	71	81.250	Mola_mola
ENSPNAG00000005290	smfn	83	75.664	ENSMODG00000013913	REXO2	96	75.664	Monodelphis_domestica
ENSPNAG00000005290	smfn	93	68.379	ENSMALG00000018130	smfn	55	81.443	Monopterus_albus
ENSPNAG00000005290	smfn	75	80.882	MGP_CAROLIEiJ_G0032166	Rexo2	82	82.564	Mus_caroli
ENSPNAG00000005290	smfn	75	80.882	ENSMUSG00000032026	Rexo2	82	82.564	Mus_musculus
ENSPNAG00000005290	smfn	75	80.882	MGP_PahariEiJ_G0015034	Rexo2	82	82.564	Mus_pahari
ENSPNAG00000005290	smfn	75	80.882	MGP_SPRETEiJ_G0033305	Rexo2	82	82.564	Mus_spretus
ENSPNAG00000005290	smfn	76	80.193	ENSMPUG00000003947	REXO2	82	83.077	Mustela_putorius_furo
ENSPNAG00000005290	smfn	84	73.593	ENSMLUG00000009030	REXO2	97	73.593	Myotis_lucifugus
ENSPNAG00000005290	smfn	74	82.000	ENSNGAG00000008819	Rexo2	95	83.077	Nannospalax_galili
ENSPNAG00000005290	smfn	67	80.769	ENSNBRG00000006529	smfn	96	80.769	Neolamprologus_brichardi
ENSPNAG00000005290	smfn	79	78.140	ENSNLEG00000029745	REXO2	82	83.077	Nomascus_leucogenys
ENSPNAG00000005290	smfn	75	80.392	ENSMEUG00000011558	REXO2	89	82.564	Notamacropus_eugenii
ENSPNAG00000005290	smfn	76	55.556	ENSOPRG00000011076	REXO2	55	79.231	Ochotona_princeps
ENSPNAG00000005290	smfn	68	83.696	ENSODEG00000009750	-	98	83.696	Octodon_degus
ENSPNAG00000005290	smfn	65	67.045	ENSODEG00000016046	-	86	67.442	Octodon_degus
ENSPNAG00000005290	smfn	85	74.348	ENSONIG00000001954	smfn	83	81.443	Oreochromis_niloticus
ENSPNAG00000005290	smfn	76	80.193	ENSOANG00000001754	REXO2	83	82.323	Ornithorhynchus_anatinus
ENSPNAG00000005290	smfn	76	80.676	ENSOCUG00000004274	REXO2	78	83.590	Oryctolagus_cuniculus
ENSPNAG00000005290	smfn	73	84.848	ENSORLG00000005119	smfn	63	85.567	Oryzias_latipes
ENSPNAG00000005290	smfn	73	84.848	ENSORLG00020010121	smfn	63	85.567	Oryzias_latipes_hni
ENSPNAG00000005290	smfn	73	84.848	ENSORLG00015015699	smfn	63	85.567	Oryzias_latipes_hsok
ENSPNAG00000005290	smfn	52	82.270	ENSOMEG00000008940	-	99	82.270	Oryzias_melastigma
ENSPNAG00000005290	smfn	73	82.915	ENSOMEG00000016878	REXO2	72	83.590	Oryzias_melastigma
ENSPNAG00000005290	smfn	76	80.676	ENSOGAG00000016860	REXO2	82	83.590	Otolemur_garnettii
ENSPNAG00000005290	smfn	73	83.249	ENSOARG00000001040	REXO2	92	83.077	Ovis_aries
ENSPNAG00000005290	smfn	79	78.140	ENSPPAG00000039849	REXO2	82	83.077	Pan_paniscus
ENSPNAG00000005290	smfn	79	78.140	ENSPPRG00000007255	REXO2	82	83.077	Panthera_pardus
ENSPNAG00000005290	smfn	68	83.152	ENSPTIG00000015578	REXO2	98	83.152	Panthera_tigris_altaica
ENSPNAG00000005290	smfn	79	78.140	ENSPTRG00000004306	REXO2	82	83.077	Pan_troglodytes
ENSPNAG00000005290	smfn	84	74.026	ENSPANG00000010675	REXO2	82	83.077	Papio_anubis
ENSPNAG00000005290	smfn	100	69.751	ENSPKIG00000000911	smfn	100	69.039	Paramormyrops_kingsleyae
ENSPNAG00000005290	smfn	72	82.564	ENSPSIG00000005151	REXO2	71	82.474	Pelodiscus_sinensis
ENSPNAG00000005290	smfn	68	85.246	ENSPMGG00000007442	smfn	97	85.246	Periophthalmus_magnuspinnatus
ENSPNAG00000005290	smfn	82	60.000	ENSPEMG00000001421	Rexo2	81	68.205	Peromyscus_maniculatus_bairdii
ENSPNAG00000005290	smfn	82	75.893	ENSPCIG00000011227	REXO2	60	75.893	Phascolarctos_cinereus
ENSPNAG00000005290	smfn	82	74.775	ENSPFOG00000017861	smfn	96	81.443	Poecilia_formosa
ENSPNAG00000005290	smfn	68	76.503	ENSPLAG00000007327	REXO2	61	83.019	Poecilia_latipinna
ENSPNAG00000005290	smfn	74	80.500	ENSPMEG00000017343	smfn	69	81.443	Poecilia_mexicana
ENSPNAG00000005290	smfn	74	79.602	ENSPREG00000016438	smfn	70	80.513	Poecilia_reticulata
ENSPNAG00000005290	smfn	79	78.140	ENSPPYG00000003895	REXO2	82	83.077	Pongo_abelii
ENSPNAG00000005290	smfn	84	74.026	ENSPCAG00000005237	REXO2	97	74.026	Procavia_capensis
ENSPNAG00000005290	smfn	62	82.249	ENSPCOG00000027639	REXO2	81	85.987	Propithecus_coquereli
ENSPNAG00000005290	smfn	84	63.948	ENSPVAG00000005295	REXO2	97	63.948	Pteropus_vampyrus
ENSPNAG00000005290	smfn	97	65.267	ENSPNYG00000018401	smfn	93	64.885	Pundamilia_nyererei
ENSPNAG00000005290	smfn	75	81.373	ENSRNOG00000018939	Rexo2	82	83.077	Rattus_norvegicus
ENSPNAG00000005290	smfn	84	74.026	ENSRBIG00000037809	REXO2	82	83.077	Rhinopithecus_bieti
ENSPNAG00000005290	smfn	84	74.026	ENSRROG00000038928	REXO2	82	83.077	Rhinopithecus_roxellana
ENSPNAG00000005290	smfn	72	40.099	YLR059C	REX2	75	40.099	Saccharomyces_cerevisiae
ENSPNAG00000005290	smfn	79	78.140	ENSSBOG00000028651	REXO2	82	83.590	Saimiri_boliviensis_boliviensis
ENSPNAG00000005290	smfn	82	75.446	ENSSHAG00000008008	REXO2	96	75.446	Sarcophilus_harrisii
ENSPNAG00000005290	smfn	69	87.166	ENSSFOG00015022414	smfn	99	87.166	Scleropages_formosus
ENSPNAG00000005290	smfn	99	64.855	ENSSMAG00000003168	smfn	99	64.855	Scophthalmus_maximus
ENSPNAG00000005290	smfn	96	69.231	ENSSDUG00000015624	smfn	88	68.702	Seriola_dumerili
ENSPNAG00000005290	smfn	83	78.319	ENSSLDG00000014005	smfn	77	77.193	Seriola_lalandi_dorsalis
ENSPNAG00000005290	smfn	57	77.419	ENSSPUG00000006005	REXO2	83	77.419	Sphenodon_punctatus
ENSPNAG00000005290	smfn	68	87.097	ENSSPAG00000001530	smfn	100	87.097	Stegastes_partitus
ENSPNAG00000005290	smfn	76	80.193	ENSSSCG00000015056	REXO2	82	83.077	Sus_scrofa
ENSPNAG00000005290	smfn	72	81.443	ENSTGUG00000000121	REXO2	91	76.056	Taeniopygia_guttata
ENSPNAG00000005290	smfn	97	64.906	ENSTRUG00000021529	smfn	72	77.665	Takifugu_rubripes
ENSPNAG00000005290	smfn	70	83.158	ENSTNIG00000008588	smfn	85	82.292	Tetraodon_nigroviridis
ENSPNAG00000005290	smfn	79	78.605	ENSTBEG00000017040	REXO2	82	83.590	Tupaia_belangeri
ENSPNAG00000005290	smfn	79	77.674	ENSTTRG00000014928	REXO2	82	82.564	Tursiops_truncatus
ENSPNAG00000005290	smfn	84	68.670	ENSUAMG00000019096	REXO2	81	85.350	Ursus_americanus
ENSPNAG00000005290	smfn	84	74.026	ENSUMAG00000003770	REXO2	82	83.077	Ursus_maritimus
ENSPNAG00000005290	smfn	68	63.587	ENSVPAG00000006301	REXO2	98	63.587	Vicugna_pacos
ENSPNAG00000005290	smfn	84	74.026	ENSVVUG00000025223	REXO2	83	83.077	Vulpes_vulpes
ENSPNAG00000005290	smfn	72	83.163	ENSXETG00000012648	rexo2	79	84.021	Xenopus_tropicalis
ENSPNAG00000005290	smfn	68	80.435	ENSXCOG00000018838	smfn	94	80.435	Xiphophorus_couchianus
ENSPNAG00000005290	smfn	73	79.798	ENSXMAG00000021125	smfn	63	80.000	Xiphophorus_maculatus