EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPNAG00000005519 (Gene tree)
Gene ID
108433285
Gene Symbol
-
Alias
-
Full Name
RAB6A%2C member RAS oncogene family
Gene Type
protein_coding
Species
Pygocentrus_nattereri
Status
putative
Strand
Plus strand
Length
20496 bases
Position
chrKV575418.1:1828833-1849328
Accession
108433285
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNAP00000036547MMR_HSR1PF01926.237.3e-0511
ENSPNAP00000020523MMR_HSR1PF01926.238.2e-0511
ENSPNAP00000020508MMR_HSR1PF01926.238.4e-0511
ENSPNAP00000020490MMR_HSR1PF01926.238.8e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNAT00000031104-1326-ENSPNAP00000020490221 (aa)--
ENSPNAT00000031139-1326XM_017707748ENSPNAP00000020508221 (aa)XP_017563237-
ENSPNAT00000031135-1326XM_017707749ENSPNAP00000036547221 (aa)XP_017563238-
ENSPNAT00000031173-1287XM_017707750ENSPNAP00000020523208 (aa)XP_017563239UPI000814A90E
Gene Model
Click here to download ENSPNAG00000005519's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000005519's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPNAG00000005519-9537.624ENSPNAG00000002404rab18b9637.624
ENSPNAG00000005519-8444.571ENSPNAG00000028138rab5c7944.571
ENSPNAG00000005519-7138.667ENSPNAG00000015040rab34b6839.130
ENSPNAG00000005519-9434.343ENSPNAG00000006569rab25b9434.343
ENSPNAG00000005519-9530.653ENSPNAG00000014085hrasa9830.653
ENSPNAG00000005519-7532.278ENSPNAG00000000584hrasb8332.278
ENSPNAG00000005519-8740.331ENSPNAG00000011193rab2a8340.331
ENSPNAG00000005519-9434.466ENSPNAG00000016567rab42a9734.466
ENSPNAG00000005519-7541.026ENSPNAG00000015031rab128136.500
ENSPNAG00000005519-9337.374ENSPNAG00000013863rab1ab8837.374
ENSPNAG00000005519-7935.465ENSPNAG00000017938RAB9A7736.628
ENSPNAG00000005519-10086.538ENSPNAG00000010157rab6bb10086.538
ENSPNAG00000005519-7538.365ENSPNAG00000013897rab39ba7540.252
ENSPNAG00000005519-7939.024ENSPNAG00000018986si:dkey-16l2.167739.024
ENSPNAG00000005519-7536.306ENSPNAG00000014863rab11a7336.943
ENSPNAG00000005519-7639.130ENSPNAG00000003179rab34a6240.994
ENSPNAG00000005519-7140.940ENSPNAG00000017856zgc:1015596541.611
ENSPNAG00000005519-7438.961ENSPNAG00000014046-8734.973
ENSPNAG00000005519-6830.921ENSPNAG00000022337-7530.921
ENSPNAG00000005519-7643.671ENSPNAG00000004189rab138445.570
ENSPNAG00000005519-7532.911ENSPNAG00000028629kras8332.911
ENSPNAG00000005519-7142.953ENSPNAG00000029115rab33ba7041.667
ENSPNAG00000005519-9034.737ENSPNAG00000029574zgc:1719279034.737
ENSPNAG00000005519-7432.468ENSPNAG00000024254rabl26732.468
ENSPNAG00000005519-5631.092ENSPNAG00000007188ARL4D5730.833
ENSPNAG00000005519-9435.500ENSPNAG00000016600-9635.500
ENSPNAG00000005519-8230.814ENSPNAG00000026295si:ch73-116o1.28230.814
ENSPNAG00000005519-8834.715ENSPNAG00000006431-8834.715
ENSPNAG00000005519-7430.058ENSPNAG00000001348rasl11b7030.058
ENSPNAG00000005519-9340.816ENSPNAG00000009496rab5ab9140.816
ENSPNAG00000005519-9539.706ENSPNAG00000022929rab33a6938.605
ENSPNAG00000005519-9992.195ENSPNAG00000021737rab419792.195
ENSPNAG00000005519-9435.500ENSPNAG00000015164-9635.500
ENSPNAG00000005519-9436.224ENSPNAG00000015161rab22a9836.224
ENSPNAG00000005519-9435.821ENSPNAG00000020583zgc:1009189635.821
ENSPNAG00000005519-7332.121ENSPNAG00000007710rasl11a6334.545
ENSPNAG00000005519-7742.857ENSPNAG00000010760rab308042.857
ENSPNAG00000005519-9437.198ENSPNAG00000014363-9537.198
ENSPNAG00000005519-7845.399ENSPNAG00000021675-7645.399
ENSPNAG00000005519-7641.772ENSPNAG00000011215rab157542.405
ENSPNAG00000005519-7635.294ENSPNAG00000007277RAB9A7937.059
ENSPNAG00000005519-7543.312ENSPNAG00000003227rab3c9138.191
ENSPNAG00000005519-7931.548ENSPNAG00000005318-8033.136
ENSPNAG00000005519-7240.909ENSPNAG00000014146-7241.176
ENSPNAG00000005519-7540.764ENSPNAG00000015810RAB157741.401
ENSPNAG00000005519-8238.043ENSPNAG00000021994rab366638.043
ENSPNAG00000005519-7736.025ENSPNAG00000029085rab11al7536.646
ENSPNAG00000005519-9241.538ENSPNAG00000023223rab5aa9041.538
ENSPNAG00000005519-9337.879ENSPNAG00000013004rab1ba9637.879
ENSPNAG00000005519-7538.994ENSPNAG00000013589rab39bb7539.623
ENSPNAG00000005519-7530.000ENSPNAG00000025619dnajc276230.000
ENSPNAG00000005519-8834.595ENSPNAG00000024728rab239535.025
ENSPNAG00000005519-8330.939ENSPNAG00000028497si:cabz01085950.19230.890
ENSPNAG00000005519-9433.333ENSPNAG00000017466rab38b9533.333
ENSPNAG00000005519-8033.333ENSPNAG00000004728rheb9633.333
ENSPNAG00000005519-9540.099ENSPNAG00000011548rab18a9840.099
ENSPNAG00000005519-9433.673ENSPNAG00000000694rab25a9532.990
ENSPNAG00000005519-8231.977ENSPNAG00000013747mras8431.250
ENSPNAG00000005519-7533.333ENSPNAG00000018361rras8133.333
ENSPNAG00000005519-8834.715ENSPNAG00000020475rab11ba8834.715
ENSPNAG00000005519-7435.185ENSPNAG00000018132rab9b7135.185
ENSPNAG00000005519-10089.904ENSPNAG00000028379rab6ba10089.904
ENSPNAG00000005519-7131.034ENSPNAG00000008867rab208230.049
ENSPNAG00000005519-9337.113ENSPNAG00000012540-9637.113
ENSPNAG00000005519-8245.029ENSPNAG00000002218-8045.029
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNAG00000005519-10089.423ENSG00000154917RAB6B100100.000Homo_sapiens
ENSPNAG00000005519-10088.942ENSAPOG00000019100rab6ba10088.942Acanthochromis_polyacanthus
ENSPNAG00000005519-10087.981ENSAPOG00000014397rab6bb10087.981Acanthochromis_polyacanthus
ENSPNAG00000005519-10096.635ENSAPOG00000016512-10096.635Acanthochromis_polyacanthus
ENSPNAG00000005519-10089.423ENSAMEG00000000252RAB6B10089.423Ailuropoda_melanoleuca
ENSPNAG00000005519-9886.275ENSACIG00000007154rab6ba9092.147Amphilophus_citrinellus
ENSPNAG00000005519-10082.212ENSACIG00000014094rab6bb10082.212Amphilophus_citrinellus
ENSPNAG00000005519-10087.981ENSAOCG00000011103rab6bb10087.981Amphiprion_ocellaris
ENSPNAG00000005519-10088.942ENSAOCG00000002298rab6ba10088.942Amphiprion_ocellaris
ENSPNAG00000005519-9190.476ENSAPEG00000020892rab6ba10092.105Amphiprion_percula
ENSPNAG00000005519-10096.154ENSAPEG00000005857-10096.154Amphiprion_percula
ENSPNAG00000005519-10087.981ENSAPEG00000007731rab6bb10087.981Amphiprion_percula
ENSPNAG00000005519-10079.263ENSATEG00000011879rab6bb10079.263Anabas_testudineus
ENSPNAG00000005519-10089.423ENSANAG00000017472RAB6B10089.423Aotus_nancymaae
ENSPNAG00000005519-10087.981ENSACLG00000026487rab6bb10087.981Astatotilapia_calliptera
ENSPNAG00000005519-10089.423ENSACLG00000025138rab6ba10089.423Astatotilapia_calliptera
ENSPNAG00000005519-10084.615ENSAMXG00000004630rab6ba9394.286Astyanax_mexicanus
ENSPNAG00000005519-10088.942ENSBTAG00000000905RAB6B10088.942Bos_taurus
ENSPNAG00000005519-9877.340WBGene00004270rab-6.28493.605Caenorhabditis_elegans
ENSPNAG00000005519-10089.423ENSCAFG00020027569RAB6B10089.423Canis_lupus_dingo
ENSPNAG00000005519-10089.423ENSCHIG00000016452RAB6B10089.423Capra_hircus
ENSPNAG00000005519-10089.423ENSCPOG00000038813RAB6B10089.423Cavia_porcellus
ENSPNAG00000005519-10089.423ENSCCAG00000035269RAB6B10089.423Cebus_capucinus
ENSPNAG00000005519-10089.423ENSCATG00000041263RAB6B10089.423Cercocebus_atys
ENSPNAG00000005519-10089.423ENSCSAG00000010704RAB6B10089.423Chlorocebus_sabaeus
ENSPNAG00000005519-10089.423ENSCPBG00000021406RAB6B10089.423Chrysemys_picta_bellii
ENSPNAG00000005519-10089.423ENSCANG00000029838RAB6B10089.423Colobus_angolensis_palliatus
ENSPNAG00000005519-10089.423ENSCGRG00001013041Rab6b10089.423Cricetulus_griseus_chok1gshd
ENSPNAG00000005519-10085.577ENSCSEG00000003122rab6ba10085.577Cynoglossus_semilaevis
ENSPNAG00000005519-10087.981ENSCSEG00000016556rab6bb10087.981Cynoglossus_semilaevis
ENSPNAG00000005519-10088.462ENSCVAG00000012889rab6ba10088.462Cyprinodon_variegatus
ENSPNAG00000005519-10087.981ENSCVAG00000004751rab6bb10087.981Cyprinodon_variegatus
ENSPNAG00000005519-10089.423ENSDARG00000034522rab6ba10089.423Danio_rerio
ENSPNAG00000005519-10086.058ENSDARG00000031343rab6bb10086.058Danio_rerio
ENSPNAG00000005519-10089.423ENSDORG00000026441Rab6b10089.423Dipodomys_ordii
ENSPNAG00000005519-10087.500ENSEBUG00000000963-10087.500Eptatretus_burgeri
ENSPNAG00000005519-10087.981ENSELUG00000022470rab6bb10087.981Esox_lucius
ENSPNAG00000005519-10087.500ENSELUG00000001257rab6ba10087.500Esox_lucius
ENSPNAG00000005519-10089.423ENSFCAG00000040897RAB6B10089.423Felis_catus
ENSPNAG00000005519-10089.423ENSFDAG00000005525RAB6B10089.423Fukomys_damarensis
ENSPNAG00000005519-9196.296ENSFHEG00000001477-7597.368Fundulus_heteroclitus
ENSPNAG00000005519-10088.462ENSFHEG00000022524rab6bb10088.462Fundulus_heteroclitus
ENSPNAG00000005519-10088.462ENSGAFG00000017270rab6ba10088.462Gambusia_affinis
ENSPNAG00000005519-10087.981ENSGAFG00000010916rab6bb10087.981Gambusia_affinis
ENSPNAG00000005519-10086.538ENSGACG00000013721rab6bb10086.538Gasterosteus_aculeatus
ENSPNAG00000005519-10084.186ENSGACG00000003726rab6ba10084.186Gasterosteus_aculeatus
ENSPNAG00000005519-10088.942ENSGAGG00000022371-10088.942Gopherus_agassizii
ENSPNAG00000005519-10089.423ENSGGOG00000028342RAB6B10089.423Gorilla_gorilla
ENSPNAG00000005519-10080.288ENSHBUG00000003230rab6bb10080.288Haplochromis_burtoni
ENSPNAG00000005519-10089.423ENSHBUG00000012905rab6ba10089.423Haplochromis_burtoni
ENSPNAG00000005519-10089.423ENSHGLG00000016898RAB6B10089.423Heterocephalus_glaber_female
ENSPNAG00000005519-10089.423ENSHGLG00100016679RAB6B10089.423Heterocephalus_glaber_male
ENSPNAG00000005519-10087.500ENSHCOG00000013130rab6bb10087.500Hippocampus_comes
ENSPNAG00000005519-10086.058ENSHCOG00000014711rab6ba10086.058Hippocampus_comes
ENSPNAG00000005519-10084.135ENSIPUG00000018098rab6b10084.135Ictalurus_punctatus
ENSPNAG00000005519-10088.942ENSIPUG00000015058rab6b10088.942Ictalurus_punctatus
ENSPNAG00000005519-10089.423ENSSTOG00000014123RAB6B10089.423Ictidomys_tridecemlineatus
ENSPNAG00000005519-10087.500ENSKMAG00000011278rab6bb10087.500Kryptolebias_marmoratus
ENSPNAG00000005519-10087.981ENSKMAG00000015507rab6ba10087.981Kryptolebias_marmoratus
ENSPNAG00000005519-9991.220ENSKMAG00000002545-9791.220Kryptolebias_marmoratus
ENSPNAG00000005519-10088.462ENSLBEG00000026930rab6ba10088.462Labrus_bergylta
ENSPNAG00000005519-10087.500ENSLBEG00000019372rab6bb10087.500Labrus_bergylta
ENSPNAG00000005519-9189.947ENSLAFG00000009905RAB6B10091.534Loxodonta_africana
ENSPNAG00000005519-10089.423ENSMFAG00000032149RAB6B10089.423Macaca_fascicularis
ENSPNAG00000005519-10089.423ENSMMUG00000008919RAB6B10089.423Macaca_mulatta
ENSPNAG00000005519-10089.423ENSMNEG00000037540RAB6B10089.423Macaca_nemestrina
ENSPNAG00000005519-10088.942ENSMAMG00000009672rab6ba10088.942Mastacembelus_armatus
ENSPNAG00000005519-10087.981ENSMAMG00000012233rab6bb10087.981Mastacembelus_armatus
ENSPNAG00000005519-10089.423ENSMZEG00005008991rab6ba10089.423Maylandia_zebra
ENSPNAG00000005519-9991.220ENSMZEG00005005866-9791.220Maylandia_zebra
ENSPNAG00000005519-10087.981ENSMZEG00005025464rab6bb10087.981Maylandia_zebra
ENSPNAG00000005519-10089.423ENSMICG00000049590RAB6B10089.423Microcebus_murinus
ENSPNAG00000005519-10089.423ENSMOCG00000001455Rab6b10089.423Microtus_ochrogaster
ENSPNAG00000005519-10087.500ENSMMOG00000018976rab6bb10087.500Mola_mola
ENSPNAG00000005519-10085.577ENSMMOG00000006947rab6ba10085.577Mola_mola
ENSPNAG00000005519-10089.423ENSMODG00000018494RAB6B10089.423Monodelphis_domestica
ENSPNAG00000005519-10087.981ENSMALG00000015854rab6ba10087.981Monopterus_albus
ENSPNAG00000005519-10087.500ENSMALG00000017417rab6bb10087.500Monopterus_albus
ENSPNAG00000005519-10089.423MGP_CAROLIEiJ_G0032585Rab6b10089.423Mus_caroli
ENSPNAG00000005519-10089.423ENSMUSG00000032549Rab6b10089.423Mus_musculus
ENSPNAG00000005519-10089.423MGP_PahariEiJ_G0015453Rab6b10089.423Mus_pahari
ENSPNAG00000005519-10089.423MGP_SPRETEiJ_G0033730Rab6b10089.423Mus_spretus
ENSPNAG00000005519-10089.423ENSNGAG00000020441Rab6b10089.423Nannospalax_galili
ENSPNAG00000005519-10089.423ENSNBRG00000013673rab6ba10089.423Neolamprologus_brichardi
ENSPNAG00000005519-10080.288ENSNBRG00000015905rab6bb10080.288Neolamprologus_brichardi
ENSPNAG00000005519-10083.173ENSNLEG00000003675RAB6B10083.173Nomascus_leucogenys
ENSPNAG00000005519-10089.423ENSOPRG00000001164RAB6B10089.423Ochotona_princeps
ENSPNAG00000005519-10087.981ENSONIG00000009886rab6bb10087.981Oreochromis_niloticus
ENSPNAG00000005519-10089.904ENSOCUG00000009428RAB6B10089.904Oryctolagus_cuniculus
ENSPNAG00000005519-10087.981ENSORLG00000016290rab6bb10087.981Oryzias_latipes
ENSPNAG00000005519-10085.581ENSORLG00020010772rab6ba10085.581Oryzias_latipes_hni
ENSPNAG00000005519-10087.981ENSORLG00020013337rab6bb10087.981Oryzias_latipes_hni
ENSPNAG00000005519-10088.462ENSORLG00015006970rab6ba10088.462Oryzias_latipes_hsok
ENSPNAG00000005519-10087.981ENSORLG00015013537rab6bb10087.981Oryzias_latipes_hsok
ENSPNAG00000005519-10088.942ENSOMEG00000014206rab6ba10088.942Oryzias_melastigma
ENSPNAG00000005519-10087.981ENSOMEG00000023625rab6bb10087.981Oryzias_melastigma
ENSPNAG00000005519-10089.423ENSOGAG00000005245RAB6B10089.423Otolemur_garnettii
ENSPNAG00000005519-10089.423ENSPPAG00000042439RAB6B10089.423Pan_paniscus
ENSPNAG00000005519-10089.423ENSPPRG00000023437RAB6B10089.423Panthera_pardus
ENSPNAG00000005519-10089.423ENSPTRG00000048374RAB6B10089.423Pan_troglodytes
ENSPNAG00000005519-10089.423ENSPANG00000009221RAB6B10089.423Papio_anubis
ENSPNAG00000005519-10090.385ENSPKIG00000003261-10090.385Paramormyrops_kingsleyae
ENSPNAG00000005519-10096.635ENSPKIG00000024232-10096.635Paramormyrops_kingsleyae
ENSPNAG00000005519-10080.769ENSPMGG00000015233rab6bb10080.769Periophthalmus_magnuspinnatus
ENSPNAG00000005519-10089.423ENSPCIG00000010292-10089.423Phascolarctos_cinereus
ENSPNAG00000005519-10088.462ENSPFOG00000003742rab6ba10088.462Poecilia_formosa
ENSPNAG00000005519-10088.462ENSPLAG00000022260rab6ba10088.462Poecilia_latipinna
ENSPNAG00000005519-10087.981ENSPLAG00000019707rab6bb10087.981Poecilia_latipinna
ENSPNAG00000005519-10088.462ENSPMEG00000019167rab6ba10088.462Poecilia_mexicana
ENSPNAG00000005519-10087.981ENSPMEG00000021872rab6bb10087.981Poecilia_mexicana
ENSPNAG00000005519-10083.732ENSPREG00000015480rab6ba9392.473Poecilia_reticulata
ENSPNAG00000005519-10089.423ENSPPYG00000014116RAB6B10089.423Pongo_abelii
ENSPNAG00000005519-10088.942ENSPCAG00000013887RAB6B10088.942Procavia_capensis
ENSPNAG00000005519-10089.423ENSPCOG00000018146RAB6B10089.423Propithecus_coquereli
ENSPNAG00000005519-10080.288ENSPNYG00000010861rab6bb10080.288Pundamilia_nyererei
ENSPNAG00000005519-10089.423ENSPNYG00000019963rab6ba10092.105Pundamilia_nyererei
ENSPNAG00000005519-10089.423ENSRNOG00000009198Rab6b10089.423Rattus_norvegicus
ENSPNAG00000005519-10089.423ENSRBIG00000031164RAB6B10089.423Rhinopithecus_bieti
ENSPNAG00000005519-10089.423ENSRROG00000030454RAB6B10089.423Rhinopithecus_roxellana
ENSPNAG00000005519-10089.423ENSSBOG00000032178RAB6B10089.423Saimiri_boliviensis_boliviensis
ENSPNAG00000005519-10089.423ENSSFOG00015019202RAB6B10089.423Scleropages_formosus
ENSPNAG00000005519-10087.981ENSSMAG00000000335rab6bb10087.981Scophthalmus_maximus
ENSPNAG00000005519-10087.981ENSSDUG00000009251rab6bb10087.981Seriola_dumerili
ENSPNAG00000005519-10088.942ENSSDUG00000021882rab6ba10088.942Seriola_dumerili
ENSPNAG00000005519-9991.220ENSSDUG00000018970RAB6B9791.220Seriola_dumerili
ENSPNAG00000005519-10087.981ENSSLDG00000012474rab6bb10087.981Seriola_lalandi_dorsalis
ENSPNAG00000005519-10088.942ENSSLDG00000003264rab6ba10088.942Seriola_lalandi_dorsalis
ENSPNAG00000005519-10088.942ENSSPAG00000017366rab6ba10088.942Stegastes_partitus
ENSPNAG00000005519-10087.981ENSSPAG00000009276rab6bb10087.981Stegastes_partitus
ENSPNAG00000005519-10089.423ENSSSCG00000036503RAB6B10089.423Sus_scrofa
ENSPNAG00000005519-10087.981ENSTRUG00000004881rab6bb10087.981Takifugu_rubripes
ENSPNAG00000005519-10087.981ENSTNIG00000015257rab6bb10087.981Tetraodon_nigroviridis
ENSPNAG00000005519-10089.423ENSVVUG00000005711RAB6B10089.423Vulpes_vulpes
ENSPNAG00000005519-10087.981ENSXCOG00000002232rab6bb10087.981Xiphophorus_couchianus
ENSPNAG00000005519-10088.462ENSXMAG00000016638rab6ba10088.462Xiphophorus_maculatus
ENSPNAG00000005519-10087.981ENSXMAG00000015903rab6bb10087.981Xiphophorus_maculatus

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