EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000005748 (Gene tree)
Gene ID: 108430026
Gene Symbol: ercc3
Alias: wu:fc25f08|xpb
Full Name: ERCC excision repair 3%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 27042 bases
Position: chrKV575367.1:2432499-2459540
Accession: 108430026
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000016369	ResIII	PF04851.15	2.9e-15	1	1
ENSPNAP00000016337	ResIII	PF04851.15	2.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000024799	-	5925	-	ENSPNAP00000016337	801 (aa)	-	-
ENSPNAT00000038089	-	6090	XM_017702167	ENSPNAP00000016369	782 (aa)	XP_017557656	UPI0008148AFB

Gene Model

Click here to download ENSPNAG00000005748's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000005748's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000005748	ercc3	100	88.025	ENSG00000163161	ERCC3	99	95.652	Homo_sapiens
ENSPNAG00000005748	ercc3	100	92.593	ENSAPOG00000014383	ercc3	100	92.593	Acanthochromis_polyacanthus
ENSPNAG00000005748	ercc3	100	87.898	ENSAMEG00000016840	ERCC3	100	88.408	Ailuropoda_melanoleuca
ENSPNAG00000005748	ercc3	99	92.258	ENSACIG00000000126	ercc3	100	91.742	Amphilophus_citrinellus
ENSPNAG00000005748	ercc3	100	92.720	ENSAOCG00000009396	ercc3	100	92.720	Amphiprion_ocellaris
ENSPNAG00000005748	ercc3	100	92.720	ENSAPEG00000023077	ercc3	100	92.720	Amphiprion_percula
ENSPNAG00000005748	ercc3	100	93.112	ENSATEG00000014860	ercc3	100	93.367	Anabas_testudineus
ENSPNAG00000005748	ercc3	91	89.014	ENSAPLG00000012068	ERCC3	98	89.014	Anas_platyrhynchos
ENSPNAG00000005748	ercc3	92	89.459	ENSACAG00000009919	ERCC3	100	89.459	Anolis_carolinensis
ENSPNAG00000005748	ercc3	100	88.153	ENSANAG00000031091	ERCC3	100	88.153	Aotus_nancymaae
ENSPNAG00000005748	ercc3	100	92.848	ENSACLG00000022508	ercc3	100	92.848	Astatotilapia_calliptera
ENSPNAG00000005748	ercc3	100	95.013	ENSAMXG00000036947	ercc3	100	95.013	Astyanax_mexicanus
ENSPNAG00000005748	ercc3	100	88.408	ENSBTAG00000020777	ERCC3	100	88.408	Bos_taurus
ENSPNAG00000005748	ercc3	99	61.702	WBGene00013441	xpb-1	96	63.459	Caenorhabditis_elegans
ENSPNAG00000005748	ercc3	100	88.025	ENSCJAG00000010416	ERCC3	100	88.025	Callithrix_jacchus
ENSPNAG00000005748	ercc3	96	89.272	ENSCAFG00000004497	ERCC3	100	87.739	Canis_familiaris
ENSPNAG00000005748	ercc3	96	89.272	ENSCAFG00020003495	ERCC3	100	87.739	Canis_lupus_dingo
ENSPNAG00000005748	ercc3	100	88.662	ENSCHIG00000014551	ERCC3	100	88.662	Capra_hircus
ENSPNAG00000005748	ercc3	99	87.242	ENSTSYG00000004137	ERCC3	99	87.242	Carlito_syrichta
ENSPNAG00000005748	ercc3	89	73.571	ENSCAPG00000017027	ERCC3	100	73.571	Cavia_aperea
ENSPNAG00000005748	ercc3	100	86.497	ENSCPOG00000002144	ERCC3	100	87.006	Cavia_porcellus
ENSPNAG00000005748	ercc3	100	88.025	ENSCCAG00000024421	ERCC3	100	88.025	Cebus_capucinus
ENSPNAG00000005748	ercc3	100	88.025	ENSCATG00000032313	ERCC3	100	88.025	Cercocebus_atys
ENSPNAG00000005748	ercc3	100	86.879	ENSCLAG00000002965	ERCC3	96	87.389	Chinchilla_lanigera
ENSPNAG00000005748	ercc3	100	87.898	ENSCSAG00000016827	ERCC3	100	87.898	Chlorocebus_sabaeus
ENSPNAG00000005748	ercc3	83	94.152	ENSCHOG00000007414	ERCC3	83	94.152	Choloepus_hoffmanni
ENSPNAG00000005748	ercc3	92	90.153	ENSCPBG00000013638	ERCC3	100	89.875	Chrysemys_picta_bellii
ENSPNAG00000005748	ercc3	96	71.317	ENSCING00000002867	ercc3	96	71.186	Ciona_intestinalis
ENSPNAG00000005748	ercc3	100	87.898	ENSCANG00000007094	ERCC3	100	87.898	Colobus_angolensis_palliatus
ENSPNAG00000005748	ercc3	100	87.643	ENSCGRG00001009426	Ercc3	100	88.153	Cricetulus_griseus_chok1gshd
ENSPNAG00000005748	ercc3	97	87.385	ENSCGRG00000015547	Ercc3	100	87.911	Cricetulus_griseus_crigri
ENSPNAG00000005748	ercc3	100	90.828	ENSCSEG00000016479	ercc3	100	90.828	Cynoglossus_semilaevis
ENSPNAG00000005748	ercc3	100	91.837	ENSCVAG00000015177	ercc3	100	91.837	Cyprinodon_variegatus
ENSPNAG00000005748	ercc3	97	95.099	ENSDARG00000002402	ercc3	100	93.734	Danio_rerio
ENSPNAG00000005748	ercc3	56	92.534	ENSDNOG00000035027	ERCC3	95	92.534	Dasypus_novemcinctus
ENSPNAG00000005748	ercc3	97	89.564	ENSDORG00000004671	Ercc3	100	88.265	Dipodomys_ordii
ENSPNAG00000005748	ercc3	99	67.669	FBgn0001179	hay	95	69.141	Drosophila_melanogaster
ENSPNAG00000005748	ercc3	90	89.490	ENSETEG00000019887	ERCC3	90	89.490	Echinops_telfairi
ENSPNAG00000005748	ercc3	99	80.253	ENSEBUG00000009773	ercc3	100	80.202	Eptatretus_burgeri
ENSPNAG00000005748	ercc3	100	85.839	ENSEASG00005022466	ERCC3	100	86.087	Equus_asinus_asinus
ENSPNAG00000005748	ercc3	100	88.280	ENSECAG00000006589	ERCC3	100	88.280	Equus_caballus
ENSPNAG00000005748	ercc3	93	88.934	ENSEEUG00000001057	ERCC3	99	88.934	Erinaceus_europaeus
ENSPNAG00000005748	ercc3	100	91.210	ENSELUG00000000089	ercc3	99	91.210	Esox_lucius
ENSPNAG00000005748	ercc3	100	87.771	ENSFCAG00000006989	ERCC3	100	88.280	Felis_catus
ENSPNAG00000005748	ercc3	99	87.242	ENSFALG00000003936	ERCC3	99	87.242	Ficedula_albicollis
ENSPNAG00000005748	ercc3	100	86.879	ENSFDAG00000011924	ERCC3	100	86.752	Fukomys_damarensis
ENSPNAG00000005748	ercc3	100	91.837	ENSFHEG00000005185	ercc3	100	91.837	Fundulus_heteroclitus
ENSPNAG00000005748	ercc3	100	89.514	ENSGMOG00000018032	ercc3	99	89.562	Gadus_morhua
ENSPNAG00000005748	ercc3	97	88.375	ENSGALG00000011515	ERCC3	100	87.101	Gallus_gallus
ENSPNAG00000005748	ercc3	100	91.571	ENSGAFG00000011936	ercc3	100	91.571	Gambusia_affinis
ENSPNAG00000005748	ercc3	100	90.967	ENSGACG00000015218	ercc3	99	92.044	Gasterosteus_aculeatus
ENSPNAG00000005748	ercc3	92	89.875	ENSGAGG00000018579	ERCC3	100	89.598	Gopherus_agassizii
ENSPNAG00000005748	ercc3	100	88.025	ENSGGOG00000015255	ERCC3	100	88.025	Gorilla_gorilla
ENSPNAG00000005748	ercc3	100	92.848	ENSHBUG00000003818	ercc3	100	92.848	Haplochromis_burtoni
ENSPNAG00000005748	ercc3	100	87.389	ENSHGLG00000011014	ERCC3	100	87.898	Heterocephalus_glaber_female
ENSPNAG00000005748	ercc3	100	87.389	ENSHGLG00100013806	ERCC3	100	87.898	Heterocephalus_glaber_male
ENSPNAG00000005748	ercc3	100	90.294	ENSHCOG00000016924	ercc3	100	90.294	Hippocampus_comes
ENSPNAG00000005748	ercc3	100	93.734	ENSIPUG00000021000	ercc3	100	93.734	Ictalurus_punctatus
ENSPNAG00000005748	ercc3	100	87.516	ENSSTOG00000011001	ERCC3	100	88.025	Ictidomys_tridecemlineatus
ENSPNAG00000005748	ercc3	90	87.712	ENSJJAG00000001117	Ercc3	100	87.712	Jaculus_jaculus
ENSPNAG00000005748	ercc3	100	91.699	ENSKMAG00000021764	ercc3	100	91.699	Kryptolebias_marmoratus
ENSPNAG00000005748	ercc3	100	92.209	ENSLBEG00000000468	ercc3	100	92.209	Labrus_bergylta
ENSPNAG00000005748	ercc3	96	85.901	ENSLACG00000014815	ERCC3	100	84.673	Latimeria_chalumnae
ENSPNAG00000005748	ercc3	90	89.250	ENSLOCG00000010907	ercc3	87	89.250	Lepisosteus_oculatus
ENSPNAG00000005748	ercc3	100	87.389	ENSLAFG00000014866	ERCC3	100	87.898	Loxodonta_africana
ENSPNAG00000005748	ercc3	100	88.025	ENSMFAG00000003370	ERCC3	100	88.025	Macaca_fascicularis
ENSPNAG00000005748	ercc3	100	84.277	ENSMNEG00000004215	ERCC3	100	84.277	Macaca_nemestrina
ENSPNAG00000005748	ercc3	100	88.025	ENSMLEG00000042061	ERCC3	100	88.025	Mandrillus_leucophaeus
ENSPNAG00000005748	ercc3	100	91.432	ENSMAMG00000004505	ercc3	99	91.432	Mastacembelus_armatus
ENSPNAG00000005748	ercc3	100	92.848	ENSMZEG00005004854	ercc3	100	92.848	Maylandia_zebra
ENSPNAG00000005748	ercc3	90	89.675	ENSMGAG00000011706	ERCC3	100	89.675	Meleagris_gallopavo
ENSPNAG00000005748	ercc3	100	87.277	ENSMAUG00000004515	Ercc3	100	87.659	Mesocricetus_auratus
ENSPNAG00000005748	ercc3	100	87.389	ENSMICG00000009578	ERCC3	100	87.898	Microcebus_murinus
ENSPNAG00000005748	ercc3	100	87.389	ENSMOCG00000021767	Ercc3	100	87.898	Microtus_ochrogaster
ENSPNAG00000005748	ercc3	99	90.968	ENSMMOG00000018174	ercc3	99	90.968	Mola_mola
ENSPNAG00000005748	ercc3	97	88.904	ENSMODG00000018695	ERCC3	100	87.898	Monodelphis_domestica
ENSPNAG00000005748	ercc3	100	91.315	ENSMALG00000014944	ercc3	100	91.315	Monopterus_albus
ENSPNAG00000005748	ercc3	100	87.771	MGP_CAROLIEiJ_G0022075	Ercc3	100	88.280	Mus_caroli
ENSPNAG00000005748	ercc3	100	87.913	ENSMUSG00000024382	Ercc3	100	87.659	Mus_musculus
ENSPNAG00000005748	ercc3	100	87.771	MGP_PahariEiJ_G0018809	Ercc3	100	88.280	Mus_pahari
ENSPNAG00000005748	ercc3	100	87.786	MGP_SPRETEiJ_G0022987	Ercc3	100	87.532	Mus_spretus
ENSPNAG00000005748	ercc3	100	87.516	ENSMPUG00000012021	ERCC3	100	88.025	Mustela_putorius_furo
ENSPNAG00000005748	ercc3	93	85.460	ENSMLUG00000007429	ERCC3	99	85.460	Myotis_lucifugus
ENSPNAG00000005748	ercc3	97	86.780	ENSNGAG00000019598	Ercc3	99	89.698	Nannospalax_galili
ENSPNAG00000005748	ercc3	100	92.848	ENSNBRG00000019074	ercc3	100	92.848	Neolamprologus_brichardi
ENSPNAG00000005748	ercc3	92	87.361	ENSNLEG00000015665	ERCC3	97	87.361	Nomascus_leucogenys
ENSPNAG00000005748	ercc3	100	85.987	ENSOPRG00000004553	ERCC3	100	85.987	Ochotona_princeps
ENSPNAG00000005748	ercc3	100	87.134	ENSODEG00000005795	ERCC3	100	87.643	Octodon_degus
ENSPNAG00000005748	ercc3	100	92.593	ENSONIG00000003255	ercc3	100	92.593	Oreochromis_niloticus
ENSPNAG00000005748	ercc3	100	87.898	ENSOCUG00000002248	ERCC3	100	88.408	Oryctolagus_cuniculus
ENSPNAG00000005748	ercc3	100	90.932	ENSORLG00000004393	ercc3	100	90.932	Oryzias_latipes
ENSPNAG00000005748	ercc3	100	90.561	ENSORLG00020017718	ercc3	99	92.141	Oryzias_latipes_hni
ENSPNAG00000005748	ercc3	100	90.677	ENSORLG00015015695	ercc3	100	90.677	Oryzias_latipes_hsok
ENSPNAG00000005748	ercc3	100	91.188	ENSOMEG00000015374	ercc3	100	91.188	Oryzias_melastigma
ENSPNAG00000005748	ercc3	100	87.548	ENSOGAG00000009103	ERCC3	100	87.802	Otolemur_garnettii
ENSPNAG00000005748	ercc3	100	88.535	ENSOARG00000016147	ERCC3	100	88.535	Ovis_aries
ENSPNAG00000005748	ercc3	100	88.025	ENSPPAG00000036166	ERCC3	100	88.025	Pan_paniscus
ENSPNAG00000005748	ercc3	100	87.898	ENSPPRG00000001305	ERCC3	100	88.408	Panthera_pardus
ENSPNAG00000005748	ercc3	92	89.459	ENSPTIG00000016969	ERCC3	100	89.459	Panthera_tigris_altaica
ENSPNAG00000005748	ercc3	100	88.025	ENSPTRG00000046940	ERCC3	100	88.025	Pan_troglodytes
ENSPNAG00000005748	ercc3	100	88.025	ENSPANG00000007699	ERCC3	100	88.025	Papio_anubis
ENSPNAG00000005748	ercc3	100	91.954	ENSPKIG00000001319	ercc3	100	93.510	Paramormyrops_kingsleyae
ENSPNAG00000005748	ercc3	92	89.736	ENSPSIG00000014682	ERCC3	100	89.736	Pelodiscus_sinensis
ENSPNAG00000005748	ercc3	96	91.921	ENSPMGG00000017885	ercc3	99	91.214	Periophthalmus_magnuspinnatus
ENSPNAG00000005748	ercc3	100	87.771	ENSPEMG00000013733	Ercc3	100	88.280	Peromyscus_maniculatus_bairdii
ENSPNAG00000005748	ercc3	90	79.306	ENSPMAG00000005081	ercc3	99	79.167	Petromyzon_marinus
ENSPNAG00000005748	ercc3	100	87.612	ENSPCIG00000011821	ERCC3	100	88.280	Phascolarctos_cinereus
ENSPNAG00000005748	ercc3	98	91.797	ENSPFOG00000015604	ercc3	100	91.315	Poecilia_formosa
ENSPNAG00000005748	ercc3	98	89.091	ENSPLAG00000022245	ercc3	100	92.649	Poecilia_latipinna
ENSPNAG00000005748	ercc3	98	91.797	ENSPMEG00000016987	ercc3	100	91.315	Poecilia_mexicana
ENSPNAG00000005748	ercc3	100	91.571	ENSPREG00000020921	ercc3	100	91.571	Poecilia_reticulata
ENSPNAG00000005748	ercc3	100	87.277	ENSPPYG00000012769	ERCC3	100	87.277	Pongo_abelii
ENSPNAG00000005748	ercc3	100	87.898	ENSPCOG00000024903	ERCC3	100	87.898	Propithecus_coquereli
ENSPNAG00000005748	ercc3	90	86.822	ENSPVAG00000013774	ERCC3	90	86.822	Pteropus_vampyrus
ENSPNAG00000005748	ercc3	100	92.848	ENSPNYG00000001208	ercc3	100	92.848	Pundamilia_nyererei
ENSPNAG00000005748	ercc3	100	87.643	ENSRNOG00000013180	Ercc3	100	88.153	Rattus_norvegicus
ENSPNAG00000005748	ercc3	100	87.771	ENSRBIG00000027692	ERCC3	100	87.771	Rhinopithecus_bieti
ENSPNAG00000005748	ercc3	100	88.025	ENSRROG00000040673	ERCC3	100	88.025	Rhinopithecus_roxellana
ENSPNAG00000005748	ercc3	92	56.344	YIL143C	SSL2	85	56.088	Saccharomyces_cerevisiae
ENSPNAG00000005748	ercc3	100	87.643	ENSSBOG00000023079	ERCC3	100	87.643	Saimiri_boliviensis_boliviensis
ENSPNAG00000005748	ercc3	97	88.904	ENSSHAG00000007423	ERCC3	100	87.771	Sarcophilus_harrisii
ENSPNAG00000005748	ercc3	98	91.634	ENSSFOG00015012753	ercc3	100	90.677	Scleropages_formosus
ENSPNAG00000005748	ercc3	100	90.978	ENSSMAG00000011915	ercc3	100	90.978	Scophthalmus_maximus
ENSPNAG00000005748	ercc3	100	91.826	ENSSDUG00000021181	ercc3	100	91.826	Seriola_dumerili
ENSPNAG00000005748	ercc3	100	92.082	ENSSLDG00000008744	ercc3	98	92.082	Seriola_lalandi_dorsalis
ENSPNAG00000005748	ercc3	55	80.415	ENSSARG00000000751	-	85	80.415	Sorex_araneus
ENSPNAG00000005748	ercc3	90	88.402	ENSSPUG00000015183	ERCC3	91	88.402	Sphenodon_punctatus
ENSPNAG00000005748	ercc3	100	93.622	ENSSPAG00000004748	ercc3	100	93.622	Stegastes_partitus
ENSPNAG00000005748	ercc3	100	87.643	ENSSSCG00000015721	ERCC3	100	89.013	Sus_scrofa
ENSPNAG00000005748	ercc3	99	88.402	ENSTGUG00000004920	-	100	88.789	Taeniopygia_guttata
ENSPNAG00000005748	ercc3	100	89.783	ENSTRUG00000017185	ercc3	100	89.911	Takifugu_rubripes
ENSPNAG00000005748	ercc3	97	88.729	ENSTNIG00000005457	ercc3	99	89.021	Tetraodon_nigroviridis
ENSPNAG00000005748	ercc3	80	88.376	ENSTBEG00000009381	ERCC3	81	88.376	Tupaia_belangeri
ENSPNAG00000005748	ercc3	68	92.642	ENSUAMG00000009589	-	100	92.642	Ursus_americanus
ENSPNAG00000005748	ercc3	100	88.025	ENSUMAG00000008361	ERCC3	100	88.535	Ursus_maritimus
ENSPNAG00000005748	ercc3	92	89.320	ENSVVUG00000010431	ERCC3	100	89.320	Vulpes_vulpes
ENSPNAG00000005748	ercc3	100	86.041	ENSXETG00000033646	ercc3	100	85.914	Xenopus_tropicalis
ENSPNAG00000005748	ercc3	99	91.591	ENSXCOG00000001791	ercc3	99	91.753	Xiphophorus_couchianus
ENSPNAG00000005748	ercc3	100	91.826	ENSXMAG00000003641	ercc3	100	91.826	Xiphophorus_maculatus