EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000005780 (Gene tree)
Gene ID: 108412455
Gene Symbol: dkc1
Alias: fc87a02|fi24a05|fv62a07|wu:fa28f10|wu:fc87a02|wu:fi24a05|wu:fv62a07|zgc:110395
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 8273 bases
Position: chrKV576249.1:57935-66207
Accession: 108412455
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000003765	TruB_N	PF01509.18	7.3e-21	1	1
ENSPNAP00000003792	TruB_N	PF01509.18	1.7e-20	1	1
ENSPNAP00000003765	PUA	PF01472.20	1.2e-16	1	1
ENSPNAP00000003792	PUA	PF01472.20	2.6e-16	1	1
ENSPNAP00000003765	DKCLD	PF08068.12	1.7e-30	1	1
ENSPNAP00000003792	DKCLD	PF08068.12	1.8e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000008119	-	3090	XM_017684479	ENSPNAP00000003792	521 (aa)	XP_017539968	UPI0008146042
ENSPNAT00000008150	-	1509	-	ENSPNAP00000003765	502 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000005780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000005780's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000005780	dkc1	82	84.988	ENSG00000130826	DKC1	99	88.350	Homo_sapiens
ENSPNAG00000005780	dkc1	96	81.437	ENSAPOG00000007799	dkc1	89	84.967	Acanthochromis_polyacanthus
ENSPNAG00000005780	dkc1	82	85.194	ENSAMEG00000002776	DKC1	90	81.004	Ailuropoda_melanoleuca
ENSPNAG00000005780	dkc1	86	87.471	ENSACIG00000022614	dkc1	88	86.468	Amphilophus_citrinellus
ENSPNAG00000005780	dkc1	87	85.714	ENSAOCG00000013159	dkc1	87	86.574	Amphiprion_ocellaris
ENSPNAG00000005780	dkc1	99	80.309	ENSAPEG00000002284	dkc1	87	87.298	Amphiprion_percula
ENSPNAG00000005780	dkc1	87	85.135	ENSATEG00000013682	dkc1	86	85.135	Anabas_testudineus
ENSPNAG00000005780	dkc1	79	86.935	ENSACAG00000015600	DKC1	77	80.624	Anolis_carolinensis
ENSPNAG00000005780	dkc1	87	80.603	ENSANAG00000022732	DKC1	90	80.603	Aotus_nancymaae
ENSPNAG00000005780	dkc1	84	89.524	ENSACLG00000015605	dkc1	85	89.524	Astatotilapia_calliptera
ENSPNAG00000005780	dkc1	90	92.088	ENSAMXG00000017108	dkc1	91	93.291	Astyanax_mexicanus
ENSPNAG00000005780	dkc1	92	77.322	ENSBTAG00000013045	DKC1	91	79.957	Bos_taurus
ENSPNAG00000005780	dkc1	80	65.509	WBGene00010478	K01G5.5	96	62.061	Caenorhabditis_elegans
ENSPNAG00000005780	dkc1	87	80.736	ENSCJAG00000004210	DKC1	90	80.736	Callithrix_jacchus
ENSPNAG00000005780	dkc1	93	76.759	ENSCAFG00000019620	-	90	79.355	Canis_familiaris
ENSPNAG00000005780	dkc1	88	70.588	ENSCAFG00000009311	-	86	71.724	Canis_familiaris
ENSPNAG00000005780	dkc1	93	76.759	ENSCAFG00020008918	-	90	79.355	Canis_lupus_dingo
ENSPNAG00000005780	dkc1	79	75.443	ENSCAFG00020009379	-	82	71.462	Canis_lupus_dingo
ENSPNAG00000005780	dkc1	94	76.160	ENSCHIG00000017392	DKC1	91	80.172	Capra_hircus
ENSPNAG00000005780	dkc1	93	77.426	ENSTSYG00000007681	DKC1	86	79.249	Carlito_syrichta
ENSPNAG00000005780	dkc1	74	87.027	ENSCAPG00000003342	DKC1	91	83.000	Cavia_aperea
ENSPNAG00000005780	dkc1	87	80.870	ENSCPOG00000008825	DKC1	89	80.870	Cavia_porcellus
ENSPNAG00000005780	dkc1	87	71.121	ENSCCAG00000027418	DKC1	89	71.121	Cebus_capucinus
ENSPNAG00000005780	dkc1	83	84.135	ENSCATG00000033602	DKC1	90	79.526	Cercocebus_atys
ENSPNAG00000005780	dkc1	84	81.567	ENSCLAG00000000720	DKC1	87	80.769	Chinchilla_lanigera
ENSPNAG00000005780	dkc1	83	84.135	ENSCSAG00000006706	DKC1	90	79.526	Chlorocebus_sabaeus
ENSPNAG00000005780	dkc1	88	78.747	ENSCPBG00000005858	DKC1	90	82.670	Chrysemys_picta_bellii
ENSPNAG00000005780	dkc1	79	79.899	ENSCING00000004599	-	84	75.231	Ciona_intestinalis
ENSPNAG00000005780	dkc1	88	72.851	ENSCSAVG00000010047	-	95	71.875	Ciona_savignyi
ENSPNAG00000005780	dkc1	83	84.135	ENSCANG00000027987	DKC1	90	79.526	Colobus_angolensis_palliatus
ENSPNAG00000005780	dkc1	87	78.664	ENSCGRG00001014574	-	90	78.664	Cricetulus_griseus_chok1gshd
ENSPNAG00000005780	dkc1	93	58.547	ENSCGRG00001016789	-	89	58.182	Cricetulus_griseus_chok1gshd
ENSPNAG00000005780	dkc1	87	78.664	ENSCGRG00000016075	-	90	78.664	Cricetulus_griseus_crigri
ENSPNAG00000005780	dkc1	93	58.547	ENSCGRG00000014809	-	87	58.182	Cricetulus_griseus_crigri
ENSPNAG00000005780	dkc1	95	82.008	ENSCSEG00000012633	dkc1	95	82.511	Cynoglossus_semilaevis
ENSPNAG00000005780	dkc1	87	86.957	ENSCVAG00000010155	dkc1	88	85.651	Cyprinodon_variegatus
ENSPNAG00000005780	dkc1	80	93.300	ENSDARG00000016484	dkc1	86	89.294	Danio_rerio
ENSPNAG00000005780	dkc1	87	80.860	ENSDNOG00000004218	DKC1	90	80.860	Dasypus_novemcinctus
ENSPNAG00000005780	dkc1	59	71.088	ENSDORG00000013566	-	100	71.333	Dipodomys_ordii
ENSPNAG00000005780	dkc1	86	69.912	FBgn0259937	Nop60B	98	67.568	Drosophila_melanogaster
ENSPNAG00000005780	dkc1	79	85.176	ENSETEG00000016095	DKC1	81	85.176	Echinops_telfairi
ENSPNAG00000005780	dkc1	52	53.608	ENSEBUG00000016062	dkc1	98	54.577	Eptatretus_burgeri
ENSPNAG00000005780	dkc1	69	75.145	ENSEBUG00000015962	dkc1	98	80.412	Eptatretus_burgeri
ENSPNAG00000005780	dkc1	92	77.440	ENSEASG00005007484	DKC1	84	82.569	Equus_asinus_asinus
ENSPNAG00000005780	dkc1	92	77.440	ENSECAG00000023524	DKC1	84	82.569	Equus_caballus
ENSPNAG00000005780	dkc1	77	86.788	ENSEEUG00000003323	DKC1	98	83.693	Erinaceus_europaeus
ENSPNAG00000005780	dkc1	87	87.445	ENSELUG00000014538	dkc1	88	87.445	Esox_lucius
ENSPNAG00000005780	dkc1	82	84.223	ENSFCAG00000006577	DKC1	90	79.341	Felis_catus
ENSPNAG00000005780	dkc1	85	82.500	ENSFALG00000011496	DKC1	85	82.735	Ficedula_albicollis
ENSPNAG00000005780	dkc1	86	80.974	ENSFDAG00000002516	DKC1	88	80.092	Fukomys_damarensis
ENSPNAG00000005780	dkc1	84	87.059	ENSFHEG00000004627	dkc1	90	83.878	Fundulus_heteroclitus
ENSPNAG00000005780	dkc1	78	89.003	ENSGMOG00000017277	dkc1	100	89.003	Gadus_morhua
ENSPNAG00000005780	dkc1	86	82.561	ENSGALG00000005054	DKC1	89	81.779	Gallus_gallus
ENSPNAG00000005780	dkc1	86	86.143	ENSGAFG00000011486	dkc1	74	86.270	Gambusia_affinis
ENSPNAG00000005780	dkc1	79	91.457	ENSGACG00000004373	dkc1	96	92.705	Gasterosteus_aculeatus
ENSPNAG00000005780	dkc1	86	81.093	ENSGAGG00000011330	DKC1	85	81.777	Gopherus_agassizii
ENSPNAG00000005780	dkc1	87	79.957	ENSGGOG00000001045	DKC1	90	79.957	Gorilla_gorilla
ENSPNAG00000005780	dkc1	99	81.503	ENSHBUG00000012436	dkc1	90	84.934	Haplochromis_burtoni
ENSPNAG00000005780	dkc1	83	83.894	ENSHGLG00000000649	DKC1	90	79.015	Heterocephalus_glaber_female
ENSPNAG00000005780	dkc1	83	83.894	ENSHGLG00100001153	DKC1	87	80.269	Heterocephalus_glaber_male
ENSPNAG00000005780	dkc1	85	86.449	ENSHCOG00000021099	dkc1	85	87.471	Hippocampus_comes
ENSPNAG00000005780	dkc1	87	91.904	ENSIPUG00000010309	dkc1	89	92.408	Ictalurus_punctatus
ENSPNAG00000005780	dkc1	89	67.756	ENSSTOG00000011904	-	87	69.099	Ictidomys_tridecemlineatus
ENSPNAG00000005780	dkc1	89	77.948	ENSSTOG00000001074	-	95	78.925	Ictidomys_tridecemlineatus
ENSPNAG00000005780	dkc1	86	73.563	ENSSTOG00000020149	-	86	73.563	Ictidomys_tridecemlineatus
ENSPNAG00000005780	dkc1	57	71.333	ENSJJAG00000010086	-	100	71.333	Jaculus_jaculus
ENSPNAG00000005780	dkc1	85	85.151	ENSKMAG00000008010	dkc1	86	85.287	Kryptolebias_marmoratus
ENSPNAG00000005780	dkc1	85	87.150	ENSLBEG00000019122	dkc1	93	84.314	Labrus_bergylta
ENSPNAG00000005780	dkc1	87	81.538	ENSLACG00000014025	DKC1	91	87.437	Latimeria_chalumnae
ENSPNAG00000005780	dkc1	88	85.129	ENSLOCG00000013713	dkc1	89	86.836	Lepisosteus_oculatus
ENSPNAG00000005780	dkc1	79	86.181	ENSLAFG00000000221	DKC1	86	81.038	Loxodonta_africana
ENSPNAG00000005780	dkc1	83	84.135	ENSMFAG00000032398	DKC1	78	79.526	Macaca_fascicularis
ENSPNAG00000005780	dkc1	83	84.135	ENSMMUG00000005768	DKC1	90	79.526	Macaca_mulatta
ENSPNAG00000005780	dkc1	83	84.135	ENSMNEG00000034503	DKC1	90	79.526	Macaca_nemestrina
ENSPNAG00000005780	dkc1	83	84.135	ENSMLEG00000034422	DKC1	90	79.526	Mandrillus_leucophaeus
ENSPNAG00000005780	dkc1	81	92.875	ENSMAMG00000005427	dkc1	90	93.284	Mastacembelus_armatus
ENSPNAG00000005780	dkc1	99	81.696	ENSMZEG00005014503	dkc1	90	85.153	Maylandia_zebra
ENSPNAG00000005780	dkc1	73	89.617	ENSMGAG00000009238	DKC1	88	84.198	Meleagris_gallopavo
ENSPNAG00000005780	dkc1	56	71.685	ENSMAUG00000016454	-	100	70.333	Mesocricetus_auratus
ENSPNAG00000005780	dkc1	79	71.394	ENSMICG00000002818	-	99	75.890	Microcebus_murinus
ENSPNAG00000005780	dkc1	87	79.476	ENSMICG00000038751	-	91	79.476	Microcebus_murinus
ENSPNAG00000005780	dkc1	56	68.459	ENSMOCG00000001169	-	100	67.333	Microtus_ochrogaster
ENSPNAG00000005780	dkc1	80	92.750	ENSMMOG00000020348	dkc1	91	89.499	Mola_mola
ENSPNAG00000005780	dkc1	80	84.788	ENSMODG00000009243	DKC1	75	80.787	Monodelphis_domestica
ENSPNAG00000005780	dkc1	86	87.239	ENSMALG00000009454	dkc1	85	86.788	Monopterus_albus
ENSPNAG00000005780	dkc1	87	70.000	MGP_CAROLIEiJ_G0033191	Dkc1	85	82.400	Mus_caroli
ENSPNAG00000005780	dkc1	92	76.956	ENSMUSG00000031403	Dkc1	91	80.388	Mus_musculus
ENSPNAG00000005780	dkc1	99	73.194	MGP_PahariEiJ_G0031735	Dkc1	98	73.269	Mus_pahari
ENSPNAG00000005780	dkc1	100	72.642	MGP_SPRETEiJ_G0034351	Dkc1	98	73.077	Mus_spretus
ENSPNAG00000005780	dkc1	92	77.657	ENSMPUG00000016136	DKC1	78	84.123	Mustela_putorius_furo
ENSPNAG00000005780	dkc1	87	75.375	ENSMLUG00000011918	DKC1	90	75.375	Myotis_lucifugus
ENSPNAG00000005780	dkc1	56	71.685	ENSNGAG00000015724	-	100	70.234	Nannospalax_galili
ENSPNAG00000005780	dkc1	84	90.024	ENSNBRG00000005638	dkc1	84	90.238	Neolamprologus_brichardi
ENSPNAG00000005780	dkc1	87	80.172	ENSNLEG00000014323	DKC1	90	80.172	Nomascus_leucogenys
ENSPNAG00000005780	dkc1	79	81.407	ENSMEUG00000001066	DKC1	94	77.209	Notamacropus_eugenii
ENSPNAG00000005780	dkc1	73	78.846	ENSOPRG00000005248	DKC1	70	80.000	Ochotona_princeps
ENSPNAG00000005780	dkc1	56	71.685	ENSODEG00000000549	-	100	70.333	Octodon_degus
ENSPNAG00000005780	dkc1	80	86.816	ENSODEG00000011816	-	90	80.828	Octodon_degus
ENSPNAG00000005780	dkc1	85	87.963	ENSONIG00000013889	dkc1	87	87.016	Oreochromis_niloticus
ENSPNAG00000005780	dkc1	55	63.487	ENSOANG00000022295	-	85	63.607	Ornithorhynchus_anatinus
ENSPNAG00000005780	dkc1	84	83.721	ENSOANG00000008713	-	89	83.871	Ornithorhynchus_anatinus
ENSPNAG00000005780	dkc1	87	79.741	ENSOCUG00000012646	DKC1	91	79.741	Oryctolagus_cuniculus
ENSPNAG00000005780	dkc1	89	85.078	ENSORLG00000018748	dkc1	85	86.512	Oryzias_latipes
ENSPNAG00000005780	dkc1	86	85.681	ENSOMEG00000005786	dkc1	83	88.382	Oryzias_melastigma
ENSPNAG00000005780	dkc1	79	86.935	ENSOGAG00000003399	DKC1	91	77.637	Otolemur_garnettii
ENSPNAG00000005780	dkc1	89	78.775	ENSOARG00000003047	DKC1	91	79.826	Ovis_aries
ENSPNAG00000005780	dkc1	87	79.957	ENSPPAG00000023820	DKC1	90	79.957	Pan_paniscus
ENSPNAG00000005780	dkc1	82	84.223	ENSPPRG00000009104	DKC1	90	79.341	Panthera_pardus
ENSPNAG00000005780	dkc1	87	80.778	ENSPTIG00000017469	DKC1	88	80.778	Panthera_tigris_altaica
ENSPNAG00000005780	dkc1	97	76.163	ENSPTRG00000043416	-	85	73.684	Pan_troglodytes
ENSPNAG00000005780	dkc1	87	79.957	ENSPTRG00000022449	DKC1	90	79.957	Pan_troglodytes
ENSPNAG00000005780	dkc1	83	84.135	ENSPANG00000011978	DKC1	90	79.526	Papio_anubis
ENSPNAG00000005780	dkc1	86	86.621	ENSPKIG00000008443	dkc1	93	86.621	Paramormyrops_kingsleyae
ENSPNAG00000005780	dkc1	71	89.385	ENSPSIG00000013765	DKC1	86	89.385	Pelodiscus_sinensis
ENSPNAG00000005780	dkc1	94	76.613	ENSPMGG00000004097	dkc1	83	80.353	Periophthalmus_magnuspinnatus
ENSPNAG00000005780	dkc1	74	80.198	ENSPEMG00000013348	Dkc1	89	80.198	Peromyscus_maniculatus_bairdii
ENSPNAG00000005780	dkc1	79	85.176	ENSPCIG00000016706	DKC1	72	81.395	Phascolarctos_cinereus
ENSPNAG00000005780	dkc1	86	86.143	ENSPFOG00000018653	dkc1	87	85.747	Poecilia_formosa
ENSPNAG00000005780	dkc1	86	86.143	ENSPLAG00000003272	dkc1	78	86.143	Poecilia_latipinna
ENSPNAG00000005780	dkc1	86	86.143	ENSPMEG00000010413	dkc1	87	85.747	Poecilia_mexicana
ENSPNAG00000005780	dkc1	86	87.586	ENSPREG00000004100	dkc1	86	87.185	Poecilia_reticulata
ENSPNAG00000005780	dkc1	82	84.951	ENSPPYG00000020892	DKC1	90	80.088	Pongo_abelii
ENSPNAG00000005780	dkc1	74	86.290	ENSPCAG00000015034	DKC1	73	86.059	Procavia_capensis
ENSPNAG00000005780	dkc1	82	84.466	ENSPCOG00000026874	DKC1	90	79.310	Propithecus_coquereli
ENSPNAG00000005780	dkc1	89	78.876	ENSPVAG00000009222	DKC1	91	78.308	Pteropus_vampyrus
ENSPNAG00000005780	dkc1	90	84.199	ENSPNYG00000020063	dkc1	92	83.476	Pundamilia_nyererei
ENSPNAG00000005780	dkc1	87	76.180	ENSRNOG00000055562	Dkc1	91	76.180	Rattus_norvegicus
ENSPNAG00000005780	dkc1	83	84.135	ENSRBIG00000028457	DKC1	78	79.526	Rhinopithecus_bieti
ENSPNAG00000005780	dkc1	83	84.135	ENSRROG00000044780	DKC1	90	79.526	Rhinopithecus_roxellana
ENSPNAG00000005780	dkc1	76	72.063	YLR175W	-	89	67.056	Saccharomyces_cerevisiae
ENSPNAG00000005780	dkc1	87	80.172	ENSSBOG00000033746	DKC1	90	80.172	Saimiri_boliviensis_boliviensis
ENSPNAG00000005780	dkc1	83	82.407	ENSSHAG00000002463	DKC1	92	81.193	Sarcophilus_harrisii
ENSPNAG00000005780	dkc1	87	86.492	ENSSFOG00015009585	dkc1	91	85.961	Scleropages_formosus
ENSPNAG00000005780	dkc1	86	86.105	ENSSMAG00000002552	dkc1	86	86.230	Scophthalmus_maximus
ENSPNAG00000005780	dkc1	94	82.979	ENSSDUG00000009963	dkc1	90	84.279	Seriola_dumerili
ENSPNAG00000005780	dkc1	94	81.607	ENSSLDG00000019342	dkc1	92	84.389	Seriola_lalandi_dorsalis
ENSPNAG00000005780	dkc1	82	80.145	ENSSARG00000001822	DKC1	91	74.403	Sorex_araneus
ENSPNAG00000005780	dkc1	79	85.176	ENSSPUG00000018907	DKC1	87	78.289	Sphenodon_punctatus
ENSPNAG00000005780	dkc1	87	87.156	ENSSPAG00000002585	dkc1	82	87.298	Stegastes_partitus
ENSPNAG00000005780	dkc1	83	83.933	ENSSSCG00000012823	DKC1	92	82.086	Sus_scrofa
ENSPNAG00000005780	dkc1	78	85.678	ENSTGUG00000006781	DKC1	90	84.767	Taeniopygia_guttata
ENSPNAG00000005780	dkc1	86	86.343	ENSTRUG00000004413	dkc1	87	86.468	Takifugu_rubripes
ENSPNAG00000005780	dkc1	88	69.099	ENSTNIG00000002582	dkc1	87	70.112	Tetraodon_nigroviridis
ENSPNAG00000005780	dkc1	63	75.610	ENSTBEG00000011262	DKC1	85	80.323	Tupaia_belangeri
ENSPNAG00000005780	dkc1	55	87.726	ENSTTRG00000008089	DKC1	55	87.726	Tursiops_truncatus
ENSPNAG00000005780	dkc1	89	78.541	ENSUAMG00000022721	DKC1	87	85.060	Ursus_americanus
ENSPNAG00000005780	dkc1	87	80.866	ENSUMAG00000016899	DKC1	98	84.040	Ursus_maritimus
ENSPNAG00000005780	dkc1	79	71.212	ENSVVUG00000021671	-	81	67.816	Vulpes_vulpes
ENSPNAG00000005780	dkc1	93	75.630	ENSVVUG00000020734	-	80	78.065	Vulpes_vulpes
ENSPNAG00000005780	dkc1	87	82.119	ENSXETG00000032517	DKC1	85	84.296	Xenopus_tropicalis
ENSPNAG00000005780	dkc1	87	86.270	ENSXCOG00000005498	dkc1	93	86.239	Xiphophorus_couchianus
ENSPNAG00000005780	dkc1	87	84.862	ENSXMAG00000004919	dkc1	87	85.227	Xiphophorus_maculatus