EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000005831 (Gene tree)
Gene ID: 108426482
Gene Symbol: tdrd1
Alias: im:7155161
Full Name: von Willebrand factor A domain containing 2
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 48247 bases
Position: chrKV575328.1:2363398-2411644
Accession: 108426426
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000021895	TUDOR	PF00567.24	4e-116	1	4
ENSPNAP00000021895	TUDOR	PF00567.24	4e-116	2	4
ENSPNAP00000021895	TUDOR	PF00567.24	4e-116	3	4
ENSPNAP00000021895	TUDOR	PF00567.24	4e-116	4	4
ENSPNAP00000021918	TUDOR	PF00567.24	3.9e-113	1	4
ENSPNAP00000021918	TUDOR	PF00567.24	3.9e-113	2	4
ENSPNAP00000021918	TUDOR	PF00567.24	3.9e-113	3	4
ENSPNAP00000021918	TUDOR	PF00567.24	3.9e-113	4	4
ENSPNAP00000021895	SMN	PF06003.12	2.5e-19	1	1
ENSPNAP00000021918	SMN	PF06003.12	2.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000033637	-	3303	-	ENSPNAP00000021895	1100 (aa)	-	-
ENSPNAT00000033812	-	2334	XM_017695881	ENSPNAP00000022008	777 (aa)	XP_017551370	-
ENSPNAT00000033673	-	3879	XM_017696007	ENSPNAP00000021918	1169 (aa)	XP_017551496	-

Gene Model

Click here to download ENSPNAG00000005831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000005831's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000005831	tdrd1	94	35.936	ENSG00000095627	TDRD1	81	38.362	Homo_sapiens
ENSPNAG00000005831	tdrd1	91	48.155	ENSAPOG00000023199	tdrd1	92	48.505	Acanthochromis_polyacanthus
ENSPNAG00000005831	tdrd1	86	35.328	ENSAMEG00000015182	TDRD1	86	35.328	Ailuropoda_melanoleuca
ENSPNAG00000005831	tdrd1	96	47.177	ENSACIG00000010576	tdrd1	95	47.177	Amphilophus_citrinellus
ENSPNAG00000005831	tdrd1	98	51.846	ENSAOCG00000007059	tdrd1	99	51.839	Amphiprion_ocellaris
ENSPNAG00000005831	tdrd1	92	48.525	ENSAPEG00000017049	tdrd1	93	47.881	Amphiprion_percula
ENSPNAG00000005831	tdrd1	95	48.376	ENSATEG00000021627	tdrd1	96	48.376	Anabas_testudineus
ENSPNAG00000005831	tdrd1	85	34.227	ENSAPLG00000012609	TDRD1	92	34.134	Anas_platyrhynchos
ENSPNAG00000005831	tdrd1	83	34.490	ENSACAG00000009854	TDRD1	78	34.323	Anolis_carolinensis
ENSPNAG00000005831	tdrd1	94	35.600	ENSANAG00000035710	TDRD1	83	35.600	Aotus_nancymaae
ENSPNAG00000005831	tdrd1	98	46.907	ENSACLG00000014107	tdrd1	95	46.907	Astatotilapia_calliptera
ENSPNAG00000005831	tdrd1	97	76.635	ENSAMXG00000015146	tdrd1	98	76.635	Astyanax_mexicanus
ENSPNAG00000005831	tdrd1	84	35.444	ENSBTAG00000006855	TDRD1	82	35.155	Bos_taurus
ENSPNAG00000005831	tdrd1	83	38.127	ENSCJAG00000019270	TDRD1	81	37.487	Callithrix_jacchus
ENSPNAG00000005831	tdrd1	84	36.076	ENSCAFG00000011266	TDRD1	83	35.354	Canis_familiaris
ENSPNAG00000005831	tdrd1	84	36.076	ENSCAFG00020012373	TDRD1	82	35.873	Canis_lupus_dingo
ENSPNAG00000005831	tdrd1	85	35.155	ENSCHIG00000012766	TDRD1	81	35.155	Capra_hircus
ENSPNAG00000005831	tdrd1	88	36.532	ENSTSYG00000004935	TDRD1	80	36.532	Carlito_syrichta
ENSPNAG00000005831	tdrd1	94	33.143	ENSCPOG00000004190	TDRD1	84	33.143	Cavia_porcellus
ENSPNAG00000005831	tdrd1	83	38.343	ENSCCAG00000027375	TDRD1	81	37.946	Cebus_capucinus
ENSPNAG00000005831	tdrd1	94	35.533	ENSCATG00000035999	TDRD1	83	37.526	Cercocebus_atys
ENSPNAG00000005831	tdrd1	85	36.140	ENSCLAG00000003935	TDRD1	83	36.373	Chinchilla_lanigera
ENSPNAG00000005831	tdrd1	99	35.004	ENSCSAG00000005071	TDRD1	89	35.004	Chlorocebus_sabaeus
ENSPNAG00000005831	tdrd1	82	31.573	ENSCHOG00000001690	TDRD1	74	31.573	Choloepus_hoffmanni
ENSPNAG00000005831	tdrd1	89	37.363	ENSCPBG00000003780	TDRD1	85	36.618	Chrysemys_picta_bellii
ENSPNAG00000005831	tdrd1	86	38.106	ENSCANG00000035172	TDRD1	81	37.422	Colobus_angolensis_palliatus
ENSPNAG00000005831	tdrd1	89	34.513	ENSCGRG00001004632	Tdrd1	88	34.513	Cricetulus_griseus_chok1gshd
ENSPNAG00000005831	tdrd1	89	34.844	ENSCGRG00000004981	Tdrd1	86	34.844	Cricetulus_griseus_crigri
ENSPNAG00000005831	tdrd1	93	41.893	ENSCSEG00000006983	tdrd1	97	41.292	Cynoglossus_semilaevis
ENSPNAG00000005831	tdrd1	87	45.825	ENSCVAG00000020980	tdrd1	92	47.065	Cyprinodon_variegatus
ENSPNAG00000005831	tdrd1	97	59.932	ENSDARG00000007465	tdrd1	99	59.932	Danio_rerio
ENSPNAG00000005831	tdrd1	85	35.685	ENSDNOG00000012114	TDRD1	80	35.788	Dasypus_novemcinctus
ENSPNAG00000005831	tdrd1	88	35.124	ENSDORG00000009986	Tdrd1	83	35.231	Dipodomys_ordii
ENSPNAG00000005831	tdrd1	87	32.716	ENSETEG00000020143	TDRD1	82	32.236	Echinops_telfairi
ENSPNAG00000005831	tdrd1	93	34.868	ENSEASG00005014802	TDRD1	83	34.333	Equus_asinus_asinus
ENSPNAG00000005831	tdrd1	93	34.551	ENSECAG00000009748	TDRD1	85	35.064	Equus_caballus
ENSPNAG00000005831	tdrd1	84	33.787	ENSEEUG00000010076	TDRD1	81	33.787	Erinaceus_europaeus
ENSPNAG00000005831	tdrd1	97	52.170	ENSELUG00000024364	tdrd1	98	52.170	Esox_lucius
ENSPNAG00000005831	tdrd1	83	36.508	ENSFCAG00000000632	TDRD1	80	36.933	Felis_catus
ENSPNAG00000005831	tdrd1	76	36.783	ENSFALG00000002237	TDRD1	86	36.943	Ficedula_albicollis
ENSPNAG00000005831	tdrd1	83	36.522	ENSFDAG00000013225	TDRD1	84	36.522	Fukomys_damarensis
ENSPNAG00000005831	tdrd1	92	38.490	ENSFHEG00000009203	tdrd1	98	36.200	Fundulus_heteroclitus
ENSPNAG00000005831	tdrd1	78	48.598	ENSGMOG00000016797	-	69	48.598	Gadus_morhua
ENSPNAG00000005831	tdrd1	88	33.671	ENSGALG00000046180	TDRD1	90	33.300	Gallus_gallus
ENSPNAG00000005831	tdrd1	97	43.493	ENSGAFG00000002668	tdrd1	98	43.493	Gambusia_affinis
ENSPNAG00000005831	tdrd1	80	49.939	ENSGACG00000006590	tdrd1	100	49.939	Gasterosteus_aculeatus
ENSPNAG00000005831	tdrd1	94	35.377	ENSGGOG00000004250	TDRD1	83	35.377	Gorilla_gorilla
ENSPNAG00000005831	tdrd1	96	47.682	ENSHBUG00000005216	tdrd1	96	46.532	Haplochromis_burtoni
ENSPNAG00000005831	tdrd1	83	33.620	ENSHGLG00000010877	TDRD1	82	33.510	Heterocephalus_glaber_female
ENSPNAG00000005831	tdrd1	88	36.444	ENSHGLG00100013857	TDRD1	86	36.004	Heterocephalus_glaber_male
ENSPNAG00000005831	tdrd1	97	40.306	ENSHCOG00000002840	tdrd1	96	39.949	Hippocampus_comes
ENSPNAG00000005831	tdrd1	97	69.774	ENSIPUG00000017232	tdrd1	98	69.991	Ictalurus_punctatus
ENSPNAG00000005831	tdrd1	85	36.049	ENSSTOG00000003221	TDRD1	82	35.872	Ictidomys_tridecemlineatus
ENSPNAG00000005831	tdrd1	83	36.791	ENSJJAG00000014720	Tdrd1	83	36.649	Jaculus_jaculus
ENSPNAG00000005831	tdrd1	89	49.064	ENSKMAG00000018558	tdrd1	96	48.799	Kryptolebias_marmoratus
ENSPNAG00000005831	tdrd1	99	45.985	ENSLBEG00000004161	tdrd1	97	46.444	Labrus_bergylta
ENSPNAG00000005831	tdrd1	83	38.065	ENSLACG00000011559	TDRD1	84	37.068	Latimeria_chalumnae
ENSPNAG00000005831	tdrd1	93	43.315	ENSLOCG00000012030	tdrd1	100	47.012	Lepisosteus_oculatus
ENSPNAG00000005831	tdrd1	76	36.898	ENSLAFG00000011575	TDRD1	96	36.898	Loxodonta_africana
ENSPNAG00000005831	tdrd1	99	34.974	ENSMFAG00000043487	TDRD1	90	34.974	Macaca_fascicularis
ENSPNAG00000005831	tdrd1	99	34.974	ENSMMUG00000022517	TDRD1	89	34.974	Macaca_mulatta
ENSPNAG00000005831	tdrd1	99	35.031	ENSMNEG00000031108	TDRD1	90	35.031	Macaca_nemestrina
ENSPNAG00000005831	tdrd1	99	34.798	ENSMLEG00000032281	TDRD1	89	34.798	Mandrillus_leucophaeus
ENSPNAG00000005831	tdrd1	92	49.952	ENSMAMG00000015287	tdrd1	97	48.219	Mastacembelus_armatus
ENSPNAG00000005831	tdrd1	97	46.317	ENSMZEG00005025315	tdrd1	98	46.277	Maylandia_zebra
ENSPNAG00000005831	tdrd1	89	33.919	ENSMGAG00000011067	TDRD1	99	32.923	Meleagris_gallopavo
ENSPNAG00000005831	tdrd1	77	37.729	ENSMAUG00000012164	Tdrd1	78	37.729	Mesocricetus_auratus
ENSPNAG00000005831	tdrd1	86	36.423	ENSMICG00000016190	TDRD1	82	35.516	Microcebus_murinus
ENSPNAG00000005831	tdrd1	87	34.514	ENSMOCG00000022360	Tdrd1	83	35.124	Microtus_ochrogaster
ENSPNAG00000005831	tdrd1	92	49.242	ENSMMOG00000014068	tdrd1	91	49.430	Mola_mola
ENSPNAG00000005831	tdrd1	88	35.383	ENSMODG00000009788	TDRD1	83	35.236	Monodelphis_domestica
ENSPNAG00000005831	tdrd1	96	46.726	ENSMALG00000022115	tdrd1	96	47.354	Monopterus_albus
ENSPNAG00000005831	tdrd1	94	34.366	MGP_CAROLIEiJ_G0023095	Tdrd1	83	36.439	Mus_caroli
ENSPNAG00000005831	tdrd1	83	36.315	ENSMUSG00000025081	Tdrd1	79	36.184	Mus_musculus
ENSPNAG00000005831	tdrd1	84	34.038	MGP_PahariEiJ_G0014583	Tdrd1	84	34.139	Mus_pahari
ENSPNAG00000005831	tdrd1	94	33.994	MGP_SPRETEiJ_G0024016	Tdrd1	84	34.089	Mus_spretus
ENSPNAG00000005831	tdrd1	80	35.965	ENSMPUG00000001987	TDRD1	76	36.099	Mustela_putorius_furo
ENSPNAG00000005831	tdrd1	94	34.348	ENSNGAG00000015231	Tdrd1	83	36.649	Nannospalax_galili
ENSPNAG00000005831	tdrd1	96	48.044	ENSNBRG00000017920	tdrd1	95	48.044	Neolamprologus_brichardi
ENSPNAG00000005831	tdrd1	83	37.500	ENSNLEG00000016228	TDRD1	80	36.963	Nomascus_leucogenys
ENSPNAG00000005831	tdrd1	86	34.544	ENSMEUG00000007717	TDRD1	82	34.544	Notamacropus_eugenii
ENSPNAG00000005831	tdrd1	94	33.898	ENSOPRG00000009180	TDRD1	84	33.898	Ochotona_princeps
ENSPNAG00000005831	tdrd1	83	35.501	ENSODEG00000011965	TDRD1	83	35.220	Octodon_degus
ENSPNAG00000005831	tdrd1	99	47.281	ENSONIG00000016382	tdrd1	99	47.277	Oreochromis_niloticus
ENSPNAG00000005831	tdrd1	86	36.345	ENSOANG00000001562	TDRD1	85	36.056	Ornithorhynchus_anatinus
ENSPNAG00000005831	tdrd1	94	34.396	ENSOCUG00000025327	TDRD1	86	34.396	Oryctolagus_cuniculus
ENSPNAG00000005831	tdrd1	99	44.037	ENSORLG00000004833	tdrd1	100	44.037	Oryzias_latipes
ENSPNAG00000005831	tdrd1	99	44.358	ENSORLG00020019231	tdrd1	99	44.358	Oryzias_latipes_hni
ENSPNAG00000005831	tdrd1	99	44.080	ENSORLG00015017184	tdrd1	99	44.080	Oryzias_latipes_hsok
ENSPNAG00000005831	tdrd1	97	43.966	ENSOMEG00000023637	tdrd1	97	43.966	Oryzias_melastigma
ENSPNAG00000005831	tdrd1	85	36.004	ENSOGAG00000001370	TDRD1	82	35.714	Otolemur_garnettii
ENSPNAG00000005831	tdrd1	85	35.530	ENSOARG00000014200	-	80	35.530	Ovis_aries
ENSPNAG00000005831	tdrd1	94	35.755	ENSPPAG00000041621	TDRD1	83	35.755	Pan_paniscus
ENSPNAG00000005831	tdrd1	83	36.105	ENSPPRG00000000191	TDRD1	80	36.717	Panthera_pardus
ENSPNAG00000005831	tdrd1	83	36.008	ENSPTIG00000010264	TDRD1	80	36.744	Panthera_tigris_altaica
ENSPNAG00000005831	tdrd1	94	35.755	ENSPTRG00000002958	TDRD1	83	35.755	Pan_troglodytes
ENSPNAG00000005831	tdrd1	99	34.710	ENSPANG00000020752	TDRD1	90	36.072	Papio_anubis
ENSPNAG00000005831	tdrd1	92	48.387	ENSPKIG00000010586	tdrd1	92	46.809	Paramormyrops_kingsleyae
ENSPNAG00000005831	tdrd1	94	34.278	ENSPSIG00000014655	TDRD1	83	34.183	Pelodiscus_sinensis
ENSPNAG00000005831	tdrd1	78	77.419	ENSPMGG00000018890	tdrd1	94	77.419	Periophthalmus_magnuspinnatus
ENSPNAG00000005831	tdrd1	83	36.412	ENSPEMG00000004582	Tdrd1	82	36.211	Peromyscus_maniculatus_bairdii
ENSPNAG00000005831	tdrd1	75	32.208	ENSPMAG00000004416	-	100	32.527	Petromyzon_marinus
ENSPNAG00000005831	tdrd1	88	36.024	ENSPCIG00000009739	TDRD1	81	37.209	Phascolarctos_cinereus
ENSPNAG00000005831	tdrd1	89	43.948	ENSPFOG00000002145	tdrd1	98	43.948	Poecilia_formosa
ENSPNAG00000005831	tdrd1	98	42.881	ENSPLAG00000010241	tdrd1	99	42.881	Poecilia_latipinna
ENSPNAG00000005831	tdrd1	88	46.315	ENSPMEG00000021893	tdrd1	89	46.093	Poecilia_mexicana
ENSPNAG00000005831	tdrd1	97	43.408	ENSPREG00000022663	tdrd1	99	43.063	Poecilia_reticulata
ENSPNAG00000005831	tdrd1	94	34.431	ENSPPYG00000002671	TDRD1	83	34.431	Pongo_abelii
ENSPNAG00000005831	tdrd1	89	34.078	ENSPCAG00000006692	TDRD1	73	33.966	Procavia_capensis
ENSPNAG00000005831	tdrd1	94	33.365	ENSPCOG00000026619	TDRD1	80	36.052	Propithecus_coquereli
ENSPNAG00000005831	tdrd1	84	35.053	ENSPVAG00000003055	TDRD1	80	35.053	Pteropus_vampyrus
ENSPNAG00000005831	tdrd1	96	46.450	ENSPNYG00000001706	tdrd1	96	46.450	Pundamilia_nyererei
ENSPNAG00000005831	tdrd1	94	34.270	ENSRNOG00000017064	Tdrd1	84	35.415	Rattus_norvegicus
ENSPNAG00000005831	tdrd1	89	36.917	ENSRBIG00000029668	TDRD1	88	36.917	Rhinopithecus_bieti
ENSPNAG00000005831	tdrd1	99	34.446	ENSRROG00000043379	TDRD1	89	34.446	Rhinopithecus_roxellana
ENSPNAG00000005831	tdrd1	83	39.006	ENSSBOG00000023561	TDRD1	80	38.595	Saimiri_boliviensis_boliviensis
ENSPNAG00000005831	tdrd1	94	33.868	ENSSHAG00000014311	TDRD1	85	33.552	Sarcophilus_harrisii
ENSPNAG00000005831	tdrd1	90	44.455	ENSSFOG00015022020	tdrd1	96	45.270	Scleropages_formosus
ENSPNAG00000005831	tdrd1	96	47.170	ENSSMAG00000019271	tdrd1	96	47.170	Scophthalmus_maximus
ENSPNAG00000005831	tdrd1	92	50.954	ENSSDUG00000022012	tdrd1	97	50.362	Seriola_dumerili
ENSPNAG00000005831	tdrd1	92	50.237	ENSSLDG00000006423	tdrd1	98	49.864	Seriola_lalandi_dorsalis
ENSPNAG00000005831	tdrd1	84	36.288	ENSSARG00000008828	TDRD1	67	35.726	Sorex_araneus
ENSPNAG00000005831	tdrd1	75	36.516	ENSSPUG00000005015	TDRD1	79	36.516	Sphenodon_punctatus
ENSPNAG00000005831	tdrd1	92	48.197	ENSSPAG00000018805	tdrd1	91	48.197	Stegastes_partitus
ENSPNAG00000005831	tdrd1	94	33.582	ENSSSCG00000021075	TDRD1	87	34.902	Sus_scrofa
ENSPNAG00000005831	tdrd1	86	34.830	ENSTGUG00000010905	TDRD1	97	34.966	Taeniopygia_guttata
ENSPNAG00000005831	tdrd1	96	44.937	ENSTRUG00000012142	tdrd1	100	46.191	Takifugu_rubripes
ENSPNAG00000005831	tdrd1	80	40.156	ENSTNIG00000018898	tdrd1	100	38.735	Tetraodon_nigroviridis
ENSPNAG00000005831	tdrd1	85	35.567	ENSTBEG00000014417	-	81	35.350	Tupaia_belangeri
ENSPNAG00000005831	tdrd1	85	34.012	ENSTTRG00000010147	TDRD1	82	34.012	Tursiops_truncatus
ENSPNAG00000005831	tdrd1	86	35.043	ENSUAMG00000009025	TDRD1	86	35.043	Ursus_americanus
ENSPNAG00000005831	tdrd1	86	35.606	ENSUMAG00000000705	TDRD1	86	36.280	Ursus_maritimus
ENSPNAG00000005831	tdrd1	85	35.903	ENSVPAG00000004000	TDRD1	81	35.903	Vicugna_pacos
ENSPNAG00000005831	tdrd1	84	36.287	ENSVVUG00000009750	TDRD1	83	35.976	Vulpes_vulpes
ENSPNAG00000005831	tdrd1	78	48.500	ENSXCOG00000006412	tdrd1	92	48.306	Xiphophorus_couchianus
ENSPNAG00000005831	tdrd1	92	46.411	ENSXMAG00000008104	tdrd1	94	45.534	Xiphophorus_maculatus