EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000005968 (Gene tree)
Gene ID: 108425947
Gene Symbol: -
Alias: -
Full Name: poly
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 44715 bases
Position: chrKV575322.1:360938-405652
Accession: 108425947
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000021797	PARP	PF00644.20	7.8e-18	1	1
ENSPNAP00000021771	PARP	PF00644.20	4.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000033378	-	1572	-	ENSPNAP00000021771	523 (aa)	-	-
ENSPNAT00000040780	-	6843	XM_017695039	ENSPNAP00000021797	1817 (aa)	XP_017550528	UPI0008147BBA

Gene Model

Click here to download ENSPNAG00000005968's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000005968's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000005968	-	88	74.059	ENSPNAG00000028914	-	99	75.410
ENSPNAG00000005968	-	90	39.000	ENSPNAG00000028188	si:ch211-219a4.3	78	32.234

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000005968	-	69	36.585	ENSAPOG00000002274	-	51	35.897	Acanthochromis_polyacanthus
ENSPNAG00000005968	-	61	32.492	ENSACIG00000014929	-	78	42.202	Amphilophus_citrinellus
ENSPNAG00000005968	-	91	35.533	ENSAOCG00000020608	-	90	35.000	Amphiprion_ocellaris
ENSPNAG00000005968	-	99	67.635	ENSAMXG00000010209	-	92	66.667	Astyanax_mexicanus
ENSPNAG00000005968	-	54	35.185	ENSAMXG00000010091	-	91	39.597	Astyanax_mexicanus
ENSPNAG00000005968	-	90	37.056	ENSCVAG00000009352	-	80	40.909	Cyprinodon_variegatus
ENSPNAG00000005968	-	96	57.333	ENSELUG00000004826	-	95	54.018	Esox_lucius
ENSPNAG00000005968	-	89	36.364	ENSELUG00000013643	-	93	40.506	Esox_lucius
ENSPNAG00000005968	-	61	33.138	ENSHBUG00000013327	-	82	41.176	Haplochromis_burtoni
ENSPNAG00000005968	-	96	33.500	ENSIPUG00000019562	-	80	40.000	Ictalurus_punctatus
ENSPNAG00000005968	-	60	35.606	ENSIPUG00000019762	-	71	35.606	Ictalurus_punctatus
ENSPNAG00000005968	-	91	39.086	ENSKMAG00000010882	-	89	40.952	Kryptolebias_marmoratus
ENSPNAG00000005968	-	92	38.071	ENSLBEG00000026419	-	75	35.156	Labrus_bergylta
ENSPNAG00000005968	-	92	37.563	ENSMZEG00005002061	-	54	34.601	Maylandia_zebra
ENSPNAG00000005968	-	97	40.260	ENSMMOG00000010419	-	89	43.697	Mola_mola
ENSPNAG00000005968	-	60	33.731	ENSNBRG00000002998	-	82	49.020	Neolamprologus_brichardi
ENSPNAG00000005968	-	89	37.056	ENSORLG00000017404	-	76	44.643	Oryzias_latipes
ENSPNAG00000005968	-	61	31.138	ENSORLG00020014046	-	99	32.959	Oryzias_latipes_hni
ENSPNAG00000005968	-	89	36.041	ENSORLG00015004157	-	99	33.333	Oryzias_latipes_hsok
ENSPNAG00000005968	-	86	36.464	ENSORLG00015004253	-	62	37.056	Oryzias_latipes_hsok
ENSPNAG00000005968	-	61	32.836	ENSOMEG00000009483	-	76	40.645	Oryzias_melastigma
ENSPNAG00000005968	-	93	60.849	ENSPKIG00000004064	-	95	58.824	Paramormyrops_kingsleyae
ENSPNAG00000005968	-	90	38.071	ENSPFOG00000015738	-	55	33.071	Poecilia_formosa
ENSPNAG00000005968	-	61	33.333	ENSPLAG00000022742	-	83	42.727	Poecilia_latipinna
ENSPNAG00000005968	-	80	41.176	ENSPREG00000017145	-	85	42.727	Poecilia_reticulata
ENSPNAG00000005968	-	99	58.197	ENSSFOG00015019732	-	96	51.449	Scleropages_formosus
ENSPNAG00000005968	-	96	37.054	ENSSFOG00015006999	-	75	31.620	Scleropages_formosus
ENSPNAG00000005968	-	90	38.071	ENSSMAG00000016922	-	82	40.741	Scophthalmus_maximus
ENSPNAG00000005968	-	54	39.086	ENSSDUG00000013560	-	82	35.185	Seriola_dumerili
ENSPNAG00000005968	-	82	36.601	ENSSPAG00000014708	-	89	43.103	Stegastes_partitus
ENSPNAG00000005968	-	80	40.523	ENSXCOG00000012535	-	93	33.585	Xiphophorus_couchianus
ENSPNAG00000005968	-	61	33.333	ENSXMAG00000015158	-	88	42.727	Xiphophorus_maculatus