EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000005998 (Gene tree)
Gene ID: 108438347
Gene Symbol: sub1b
Alias: rpo2tc1|sub1|zgc:92831
Full Name: SUB1 homolog%2C transcriptional regulator
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 16898 bases
Position: chrKV575552.1:766138-783035
Accession: 108438347
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000035182	PC4	PF02229.16	1.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000027846	-	698	XM_017716088	ENSPNAP00000035182	125 (aa)	XP_017571577	UPI0008148F94

Gene Model

Click here to download ENSPNAG00000005998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000005998's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000005998	sub1b	99	82.400	ENSPNAG00000008693	sub1a	99	80.800

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000005998	sub1b	99	73.810	ENSG00000113387	SUB1	99	77.778	Homo_sapiens
ENSPNAG00000005998	sub1b	100	80.000	ENSAPOG00000005917	SUB1	100	80.000	Acanthochromis_polyacanthus
ENSPNAG00000005998	sub1b	99	73.016	ENSAMEG00000006238	SUB1	94	76.984	Ailuropoda_melanoleuca
ENSPNAG00000005998	sub1b	99	85.484	ENSACIG00000015976	sub1b	99	85.484	Amphilophus_citrinellus
ENSPNAG00000005998	sub1b	77	80.208	ENSAOCG00000002323	-	86	72.642	Amphiprion_ocellaris
ENSPNAG00000005998	sub1b	92	77.391	ENSAOCG00000007313	-	83	82.353	Amphiprion_ocellaris
ENSPNAG00000005998	sub1b	64	68.293	ENSAPEG00000014618	-	62	76.923	Amphiprion_percula
ENSPNAG00000005998	sub1b	100	84.000	ENSAPEG00000024347	sub1b	100	84.000	Amphiprion_percula
ENSPNAG00000005998	sub1b	87	72.973	ENSAPEG00000017151	-	71	81.319	Amphiprion_percula
ENSPNAG00000005998	sub1b	99	84.677	ENSATEG00000010340	sub1b	99	84.677	Anabas_testudineus
ENSPNAG00000005998	sub1b	99	66.667	ENSACAG00000007974	SUB1	99	69.697	Anolis_carolinensis
ENSPNAG00000005998	sub1b	99	73.810	ENSANAG00000011651	-	99	77.778	Aotus_nancymaae
ENSPNAG00000005998	sub1b	99	72.800	ENSANAG00000023392	-	83	76.000	Aotus_nancymaae
ENSPNAG00000005998	sub1b	99	85.484	ENSACLG00000016875	sub1b	63	85.484	Astatotilapia_calliptera
ENSPNAG00000005998	sub1b	100	89.683	ENSAMXG00000037104	sub1b	99	90.400	Astyanax_mexicanus
ENSPNAG00000005998	sub1b	99	73.810	ENSBTAG00000021965	SUB1	99	77.778	Bos_taurus
ENSPNAG00000005998	sub1b	80	71.569	ENSCJAG00000018718	SUB1	98	76.471	Callithrix_jacchus
ENSPNAG00000005998	sub1b	99	73.016	ENSCAFG00000018879	-	88	76.984	Canis_familiaris
ENSPNAG00000005998	sub1b	99	73.016	ENSCAFG00000016713	-	95	76.984	Canis_familiaris
ENSPNAG00000005998	sub1b	99	68.548	ENSCAFG00000024488	-	99	68.548	Canis_familiaris
ENSPNAG00000005998	sub1b	99	73.016	ENSCAFG00020016840	-	99	76.984	Canis_lupus_dingo
ENSPNAG00000005998	sub1b	100	75.781	ENSCAFG00020011479	-	76	75.591	Canis_lupus_dingo
ENSPNAG00000005998	sub1b	99	73.810	ENSCHIG00000008460	SUB1	99	77.778	Capra_hircus
ENSPNAG00000005998	sub1b	99	65.873	ENSTSYG00000035366	-	82	69.048	Carlito_syrichta
ENSPNAG00000005998	sub1b	99	67.442	ENSTSYG00000014069	-	92	71.318	Carlito_syrichta
ENSPNAG00000005998	sub1b	99	73.810	ENSTSYG00000029948	-	99	77.778	Carlito_syrichta
ENSPNAG00000005998	sub1b	99	73.810	ENSCPOG00000031334	SUB1	99	77.778	Cavia_porcellus
ENSPNAG00000005998	sub1b	99	67.200	ENSCCAG00000017043	-	92	71.200	Cebus_capucinus
ENSPNAG00000005998	sub1b	99	69.841	ENSCCAG00000033751	-	95	73.810	Cebus_capucinus
ENSPNAG00000005998	sub1b	99	73.810	ENSCCAG00000023605	-	99	77.778	Cebus_capucinus
ENSPNAG00000005998	sub1b	99	70.635	ENSCCAG00000020604	-	99	71.429	Cebus_capucinus
ENSPNAG00000005998	sub1b	99	73.810	ENSCATG00000031199	SUB1	99	77.778	Cercocebus_atys
ENSPNAG00000005998	sub1b	99	72.441	ENSCLAG00000007522	SUB1	99	75.591	Chinchilla_lanigera
ENSPNAG00000005998	sub1b	99	73.810	ENSCSAG00000017172	-	99	77.778	Chlorocebus_sabaeus
ENSPNAG00000005998	sub1b	99	72.222	ENSCSAG00000019449	-	99	73.810	Chlorocebus_sabaeus
ENSPNAG00000005998	sub1b	99	73.600	ENSCPBG00000024218	SUB1	78	74.400	Chrysemys_picta_bellii
ENSPNAG00000005998	sub1b	99	73.810	ENSCANG00000029372	SUB1	99	77.778	Colobus_angolensis_palliatus
ENSPNAG00000005998	sub1b	99	60.000	ENSCANG00000028665	-	89	63.200	Colobus_angolensis_palliatus
ENSPNAG00000005998	sub1b	99	61.111	ENSCGRG00001014660	-	99	61.905	Cricetulus_griseus_chok1gshd
ENSPNAG00000005998	sub1b	69	68.966	ENSCGRG00001016254	-	55	75.385	Cricetulus_griseus_chok1gshd
ENSPNAG00000005998	sub1b	99	71.429	ENSCGRG00001003473	-	99	75.397	Cricetulus_griseus_chok1gshd
ENSPNAG00000005998	sub1b	99	59.524	ENSCGRG00000001489	-	99	62.400	Cricetulus_griseus_crigri
ENSPNAG00000005998	sub1b	99	61.111	ENSCGRG00000019368	-	99	61.905	Cricetulus_griseus_crigri
ENSPNAG00000005998	sub1b	99	71.429	ENSCGRG00000001133	-	99	75.397	Cricetulus_griseus_crigri
ENSPNAG00000005998	sub1b	99	85.484	ENSDARG00000007720	sub1b	99	85.484	Danio_rerio
ENSPNAG00000005998	sub1b	100	79.200	ENSDARG00000053446	sub1a	100	79.200	Danio_rerio
ENSPNAG00000005998	sub1b	99	70.635	ENSDNOG00000032396	-	99	74.603	Dasypus_novemcinctus
ENSPNAG00000005998	sub1b	99	71.429	ENSDNOG00000040794	-	99	75.397	Dasypus_novemcinctus
ENSPNAG00000005998	sub1b	99	71.429	ENSDORG00000013916	Sub1	99	75.397	Dipodomys_ordii
ENSPNAG00000005998	sub1b	78	56.122	ENSEBUG00000008746	sub1a	51	56.122	Eptatretus_burgeri
ENSPNAG00000005998	sub1b	99	73.810	ENSEASG00005007099	SUB1	99	77.778	Equus_asinus_asinus
ENSPNAG00000005998	sub1b	99	73.810	ENSECAG00000012399	SUB1	99	77.778	Equus_caballus
ENSPNAG00000005998	sub1b	80	80.198	ENSEEUG00000000436	SUB1	98	77.000	Erinaceus_europaeus
ENSPNAG00000005998	sub1b	99	73.016	ENSFCAG00000037288	SUB1	99	76.984	Felis_catus
ENSPNAG00000005998	sub1b	99	72.800	ENSFALG00000002143	SUB1	86	73.600	Ficedula_albicollis
ENSPNAG00000005998	sub1b	99	73.810	ENSFDAG00000017179	SUB1	99	77.778	Fukomys_damarensis
ENSPNAG00000005998	sub1b	99	74.400	ENSGALG00000003248	SUB1	99	75.200	Gallus_gallus
ENSPNAG00000005998	sub1b	99	47.200	ENSGALG00000027147	-	99	47.200	Gallus_gallus
ENSPNAG00000005998	sub1b	99	72.800	ENSGALG00000034905	-	99	73.600	Gallus_gallus
ENSPNAG00000005998	sub1b	99	82.258	ENSGACG00000003912	sub1b	99	82.258	Gasterosteus_aculeatus
ENSPNAG00000005998	sub1b	99	74.400	ENSGAGG00000013535	SUB1	99	75.200	Gopherus_agassizii
ENSPNAG00000005998	sub1b	99	73.810	ENSGGOG00000040900	SUB1	99	77.778	Gorilla_gorilla
ENSPNAG00000005998	sub1b	98	73.171	ENSHBUG00000013953	sub1b	76	84.314	Haplochromis_burtoni
ENSPNAG00000005998	sub1b	99	73.810	ENSHGLG00000006749	SUB1	99	77.778	Heterocephalus_glaber_female
ENSPNAG00000005998	sub1b	99	73.810	ENSHGLG00100014344	SUB1	99	77.778	Heterocephalus_glaber_male
ENSPNAG00000005998	sub1b	98	76.423	ENSHCOG00000001809	sub1b	98	76.423	Hippocampus_comes
ENSPNAG00000005998	sub1b	99	85.484	ENSIPUG00000008166	sub1	99	85.484	Ictalurus_punctatus
ENSPNAG00000005998	sub1b	99	81.890	ENSIPUG00000024367	SUB1	99	79.528	Ictalurus_punctatus
ENSPNAG00000005998	sub1b	99	74.603	ENSSTOG00000019364	SUB1	99	78.571	Ictidomys_tridecemlineatus
ENSPNAG00000005998	sub1b	99	71.429	ENSJJAG00000018885	Sub1	99	74.603	Jaculus_jaculus
ENSPNAG00000005998	sub1b	100	81.600	ENSLBEG00000010728	sub1b	100	81.600	Labrus_bergylta
ENSPNAG00000005998	sub1b	52	86.154	ENSLACG00000001068	SUB1	98	87.500	Latimeria_chalumnae
ENSPNAG00000005998	sub1b	99	80.645	ENSLOCG00000006692	sub1b	99	80.645	Lepisosteus_oculatus
ENSPNAG00000005998	sub1b	99	73.810	ENSLAFG00000032088	-	99	78.571	Loxodonta_africana
ENSPNAG00000005998	sub1b	99	73.810	ENSLAFG00000011006	-	99	78.571	Loxodonta_africana
ENSPNAG00000005998	sub1b	99	73.810	ENSMFAG00000040728	SUB1	99	77.778	Macaca_fascicularis
ENSPNAG00000005998	sub1b	99	65.873	ENSMFAG00000045643	-	60	69.048	Macaca_fascicularis
ENSPNAG00000005998	sub1b	99	73.810	ENSMMUG00000046181	SUB1	99	77.778	Macaca_mulatta
ENSPNAG00000005998	sub1b	99	73.810	ENSMNEG00000037046	SUB1	99	77.778	Macaca_nemestrina
ENSPNAG00000005998	sub1b	99	59.200	ENSMLEG00000043436	-	89	62.400	Mandrillus_leucophaeus
ENSPNAG00000005998	sub1b	99	72.222	ENSMLEG00000030509	-	93	75.397	Mandrillus_leucophaeus
ENSPNAG00000005998	sub1b	99	73.810	ENSMLEG00000037017	-	99	77.778	Mandrillus_leucophaeus
ENSPNAG00000005998	sub1b	99	83.065	ENSMAMG00000018428	sub1b	99	83.065	Mastacembelus_armatus
ENSPNAG00000005998	sub1b	99	85.484	ENSMZEG00005021252	sub1b	99	85.484	Maylandia_zebra
ENSPNAG00000005998	sub1b	99	74.400	ENSMGAG00000002906	SUB1	99	75.200	Meleagris_gallopavo
ENSPNAG00000005998	sub1b	99	71.429	ENSMAUG00000020232	Sub1	99	75.397	Mesocricetus_auratus
ENSPNAG00000005998	sub1b	99	73.810	ENSMICG00000014535	SUB1	99	77.778	Microcebus_murinus
ENSPNAG00000005998	sub1b	99	70.635	ENSMOCG00000018930	-	99	74.603	Microtus_ochrogaster
ENSPNAG00000005998	sub1b	99	63.200	ENSMOCG00000016424	-	99	58.400	Microtus_ochrogaster
ENSPNAG00000005998	sub1b	82	78.641	ENSMODG00000020410	SUB1	74	78.641	Monodelphis_domestica
ENSPNAG00000005998	sub1b	99	83.871	ENSMALG00000007163	sub1b	81	83.871	Monopterus_albus
ENSPNAG00000005998	sub1b	99	71.429	MGP_CAROLIEiJ_G0019676	Sub1	99	75.397	Mus_caroli
ENSPNAG00000005998	sub1b	99	71.429	ENSMUSG00000022205	Sub1	99	75.397	Mus_musculus
ENSPNAG00000005998	sub1b	99	70.635	MGP_PahariEiJ_G0016056	Sub1	99	74.603	Mus_pahari
ENSPNAG00000005998	sub1b	99	71.429	MGP_SPRETEiJ_G0020573	Sub1	99	75.397	Mus_spretus
ENSPNAG00000005998	sub1b	99	73.016	ENSMPUG00000015185	-	99	76.984	Mustela_putorius_furo
ENSPNAG00000005998	sub1b	99	72.222	ENSMPUG00000018418	-	99	76.190	Mustela_putorius_furo
ENSPNAG00000005998	sub1b	99	70.635	ENSMLUG00000009236	-	94	73.810	Myotis_lucifugus
ENSPNAG00000005998	sub1b	99	73.810	ENSMLUG00000013685	-	94	77.778	Myotis_lucifugus
ENSPNAG00000005998	sub1b	99	63.710	ENSNGAG00000017212	-	99	63.710	Nannospalax_galili
ENSPNAG00000005998	sub1b	99	69.600	ENSNGAG00000010782	-	83	72.800	Nannospalax_galili
ENSPNAG00000005998	sub1b	99	72.222	ENSNGAG00000014072	-	99	76.190	Nannospalax_galili
ENSPNAG00000005998	sub1b	82	83.495	ENSNBRG00000008451	sub1b	83	84.314	Neolamprologus_brichardi
ENSPNAG00000005998	sub1b	99	73.016	ENSNLEG00000018383	-	94	77.778	Nomascus_leucogenys
ENSPNAG00000005998	sub1b	99	68.800	ENSNLEG00000035968	-	99	72.800	Nomascus_leucogenys
ENSPNAG00000005998	sub1b	99	73.016	ENSNLEG00000036068	SUB1	99	76.984	Nomascus_leucogenys
ENSPNAG00000005998	sub1b	99	73.600	ENSMEUG00000007770	SUB1	99	77.600	Notamacropus_eugenii
ENSPNAG00000005998	sub1b	99	72.222	ENSOPRG00000012887	SUB1	99	76.190	Ochotona_princeps
ENSPNAG00000005998	sub1b	85	75.701	ENSODEG00000015114	-	86	75.701	Octodon_degus
ENSPNAG00000005998	sub1b	99	70.635	ENSODEG00000014558	-	71	75.701	Octodon_degus
ENSPNAG00000005998	sub1b	99	73.810	ENSODEG00000001937	-	99	77.778	Octodon_degus
ENSPNAG00000005998	sub1b	99	75.200	ENSOANG00000002328	SUB1	94	79.200	Ornithorhynchus_anatinus
ENSPNAG00000005998	sub1b	99	71.429	ENSOCUG00000006262	SUB1	60	72.222	Oryctolagus_cuniculus
ENSPNAG00000005998	sub1b	99	73.810	ENSOGAG00000009012	-	99	77.778	Otolemur_garnettii
ENSPNAG00000005998	sub1b	98	73.387	ENSOGAG00000000337	-	100	77.419	Otolemur_garnettii
ENSPNAG00000005998	sub1b	99	73.810	ENSOARG00000012154	SUB1	99	77.778	Ovis_aries
ENSPNAG00000005998	sub1b	99	73.810	ENSPPAG00000011212	SUB1	99	77.778	Pan_paniscus
ENSPNAG00000005998	sub1b	99	73.016	ENSPPRG00000008557	SUB1	99	76.984	Panthera_pardus
ENSPNAG00000005998	sub1b	99	73.016	ENSPTIG00000009466	SUB1	99	76.984	Panthera_tigris_altaica
ENSPNAG00000005998	sub1b	99	73.810	ENSPTRG00000048895	SUB1	99	77.778	Pan_troglodytes
ENSPNAG00000005998	sub1b	99	68.254	ENSPTRG00000041644	-	99	72.222	Pan_troglodytes
ENSPNAG00000005998	sub1b	99	60.800	ENSPANG00000033272	-	89	60.800	Papio_anubis
ENSPNAG00000005998	sub1b	99	73.810	ENSPANG00000000339	-	96	77.778	Papio_anubis
ENSPNAG00000005998	sub1b	99	74.400	ENSPANG00000035601	-	99	74.400	Papio_anubis
ENSPNAG00000005998	sub1b	99	73.016	ENSPANG00000000672	-	90	76.190	Papio_anubis
ENSPNAG00000005998	sub1b	99	73.810	ENSPANG00000002644	-	94	77.778	Papio_anubis
ENSPNAG00000005998	sub1b	99	79.839	ENSPKIG00000016923	sub1b	99	79.839	Paramormyrops_kingsleyae
ENSPNAG00000005998	sub1b	99	74.400	ENSPSIG00000005731	SUB1	94	75.200	Pelodiscus_sinensis
ENSPNAG00000005998	sub1b	99	71.200	ENSPCIG00000020827	-	99	70.400	Phascolarctos_cinereus
ENSPNAG00000005998	sub1b	99	73.600	ENSPCIG00000020907	-	99	77.600	Phascolarctos_cinereus
ENSPNAG00000005998	sub1b	99	73.810	ENSPPYG00000015379	SUB1	99	77.778	Pongo_abelii
ENSPNAG00000005998	sub1b	99	70.635	ENSPPYG00000018347	-	99	74.603	Pongo_abelii
ENSPNAG00000005998	sub1b	99	73.810	ENSPCOG00000014391	SUB1	99	77.778	Propithecus_coquereli
ENSPNAG00000005998	sub1b	99	73.016	ENSPVAG00000004785	SUB1	99	76.984	Pteropus_vampyrus
ENSPNAG00000005998	sub1b	99	85.484	ENSPNYG00000010975	sub1b	99	85.484	Pundamilia_nyererei
ENSPNAG00000005998	sub1b	99	70.635	ENSRNOG00000050563	Sub1	99	74.603	Rattus_norvegicus
ENSPNAG00000005998	sub1b	99	73.600	ENSRBIG00000031233	SUB1	99	73.600	Rhinopithecus_bieti
ENSPNAG00000005998	sub1b	99	66.400	ENSRROG00000042718	-	90	69.600	Rhinopithecus_roxellana
ENSPNAG00000005998	sub1b	99	73.810	ENSRROG00000040438	SUB1	99	77.778	Rhinopithecus_roxellana
ENSPNAG00000005998	sub1b	99	73.810	ENSSBOG00000026994	SUB1	99	77.778	Saimiri_boliviensis_boliviensis
ENSPNAG00000005998	sub1b	99	73.600	ENSSHAG00000014986	SUB1	99	77.600	Sarcophilus_harrisii
ENSPNAG00000005998	sub1b	99	77.419	ENSSFOG00015017283	sub1b	99	77.419	Scleropages_formosus
ENSPNAG00000005998	sub1b	99	76.190	ENSSFOG00015018386	sub1b	99	76.190	Scleropages_formosus
ENSPNAG00000005998	sub1b	99	83.065	ENSSMAG00000000313	sub1b	99	83.065	Scophthalmus_maximus
ENSPNAG00000005998	sub1b	99	83.871	ENSSDUG00000013854	sub1b	76	83.871	Seriola_dumerili
ENSPNAG00000005998	sub1b	99	83.871	ENSSLDG00000000852	sub1b	99	83.871	Seriola_lalandi_dorsalis
ENSPNAG00000005998	sub1b	99	72.800	ENSSPUG00000016817	SUB1	99	73.600	Sphenodon_punctatus
ENSPNAG00000005998	sub1b	100	84.800	ENSSPAG00000019363	sub1b	100	84.800	Stegastes_partitus
ENSPNAG00000005998	sub1b	99	73.810	ENSSSCG00000040294	-	86	77.778	Sus_scrofa
ENSPNAG00000005998	sub1b	99	73.810	ENSSSCG00000032650	-	99	77.778	Sus_scrofa
ENSPNAG00000005998	sub1b	99	72.000	ENSTGUG00000001918	SUB1	99	72.800	Taeniopygia_guttata
ENSPNAG00000005998	sub1b	99	79.839	ENSTRUG00000024420	sub1b	99	79.839	Takifugu_rubripes
ENSPNAG00000005998	sub1b	99	77.419	ENSTNIG00000002700	sub1b	99	77.419	Tetraodon_nigroviridis
ENSPNAG00000005998	sub1b	99	73.810	ENSTBEG00000012861	-	99	72.222	Tupaia_belangeri
ENSPNAG00000005998	sub1b	99	73.016	ENSTBEG00000001790	-	99	72.222	Tupaia_belangeri
ENSPNAG00000005998	sub1b	99	73.810	ENSTBEG00000011247	-	98	73.810	Tupaia_belangeri
ENSPNAG00000005998	sub1b	99	69.048	ENSTBEG00000015821	-	100	73.016	Tupaia_belangeri
ENSPNAG00000005998	sub1b	99	73.016	ENSTBEG00000006504	-	99	76.984	Tupaia_belangeri
ENSPNAG00000005998	sub1b	99	73.016	ENSTBEG00000004053	-	99	76.984	Tupaia_belangeri
ENSPNAG00000005998	sub1b	80	80.198	ENSTTRG00000017324	SUB1	98	79.208	Tursiops_truncatus
ENSPNAG00000005998	sub1b	99	73.016	ENSUAMG00000000182	SUB1	99	76.984	Ursus_americanus
ENSPNAG00000005998	sub1b	99	73.016	ENSUMAG00000013792	SUB1	99	76.984	Ursus_maritimus
ENSPNAG00000005998	sub1b	99	67.200	ENSVPAG00000011012	SUB1	99	71.200	Vicugna_pacos
ENSPNAG00000005998	sub1b	99	73.016	ENSVVUG00000022166	-	99	76.984	Vulpes_vulpes
ENSPNAG00000005998	sub1b	86	68.182	ENSVVUG00000025193	-	95	70.796	Vulpes_vulpes
ENSPNAG00000005998	sub1b	99	70.079	ENSXETG00000027218	sub1	99	74.016	Xenopus_tropicalis