EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000006123 (Gene tree)
Gene ID: 108428544
Gene Symbol: si:ch211-212k18.5
Alias: fb25b09|wu:fb25b09
Full Name: spalt like transcription factor 2
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 7929 bases
Position: chrKV575349.1:57253-65181
Accession: 108428544
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000026578	zf-C2H2	PF00096.26	7.7e-18	1	2
ENSPNAP00000026578	zf-C2H2	PF00096.26	7.7e-18	2	2
ENSPNAP00000005775	zf-C2H2	PF00096.26	4.4e-17	1	2
ENSPNAP00000005775	zf-C2H2	PF00096.26	4.4e-17	2	2
ENSPNAP00000026578	zf-met	PF12874.7	1e-12	1	2
ENSPNAP00000026578	zf-met	PF12874.7	1e-12	2	2
ENSPNAP00000005775	zf-met	PF12874.7	1.3e-12	1	2
ENSPNAP00000005775	zf-met	PF12874.7	1.3e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000004767	-	3465	-	ENSPNAP00000026578	1154 (aa)	-	-
ENSPNAT00000004726	-	5977	XM_017699600	ENSPNAP00000005775	1225 (aa)	XP_017555089	UPI0008148428

Gene Model

Click here to download ENSPNAG00000006123's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000006123's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000006123	si:ch211-212k18.5	62	50.877	ENSPNAG00000021463	sall2	60	47.903

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000006123	si:ch211-212k18.5	99	54.430	ENSAPOG00000013387	si:ch211-212k18.5	99	54.992	Acanthochromis_polyacanthus
ENSPNAG00000006123	si:ch211-212k18.5	76	64.181	ENSACIG00000019922	si:ch211-212k18.5	95	64.768	Amphilophus_citrinellus
ENSPNAG00000006123	si:ch211-212k18.5	73	67.442	ENSAOCG00000016559	sall2	70	67.442	Amphiprion_ocellaris
ENSPNAG00000006123	si:ch211-212k18.5	99	55.628	ENSAOCG00000010737	si:ch211-212k18.5	99	56.561	Amphiprion_ocellaris
ENSPNAG00000006123	si:ch211-212k18.5	99	55.302	ENSAPEG00000006751	si:ch211-212k18.5	99	56.235	Amphiprion_percula
ENSPNAG00000006123	si:ch211-212k18.5	56	47.884	ENSAPEG00000020215	sall2	90	48.430	Amphiprion_percula
ENSPNAG00000006123	si:ch211-212k18.5	62	67.442	ENSATEG00000007303	sall2	65	47.242	Anabas_testudineus
ENSPNAG00000006123	si:ch211-212k18.5	70	66.094	ENSATEG00000001254	si:ch211-212k18.5	93	66.781	Anabas_testudineus
ENSPNAG00000006123	si:ch211-212k18.5	99	54.061	ENSACLG00000009709	si:ch211-212k18.5	95	57.719	Astatotilapia_calliptera
ENSPNAG00000006123	si:ch211-212k18.5	61	72.973	ENSACLG00000019867	sall2	67	72.973	Astatotilapia_calliptera
ENSPNAG00000006123	si:ch211-212k18.5	100	83.983	ENSAMXG00000010979	si:ch211-212k18.5	100	83.983	Astyanax_mexicanus
ENSPNAG00000006123	si:ch211-212k18.5	60	60.000	ENSAMXG00000020956	sall2	50	60.000	Astyanax_mexicanus
ENSPNAG00000006123	si:ch211-212k18.5	83	40.150	ENSCSEG00000021148	sall2	83	41.376	Cynoglossus_semilaevis
ENSPNAG00000006123	si:ch211-212k18.5	94	56.255	ENSCSEG00000004426	si:ch211-212k18.5	96	56.050	Cynoglossus_semilaevis
ENSPNAG00000006123	si:ch211-212k18.5	94	55.565	ENSCVAG00000007475	si:ch211-212k18.5	95	56.069	Cyprinodon_variegatus
ENSPNAG00000006123	si:ch211-212k18.5	57	70.732	ENSCVAG00000006032	sall2	50	70.732	Cyprinodon_variegatus
ENSPNAG00000006123	si:ch211-212k18.5	64	46.362	ENSDARG00000075116	sall2	50	67.568	Danio_rerio
ENSPNAG00000006123	si:ch211-212k18.5	99	69.132	ENSDARG00000103316	si:ch211-212k18.5	99	67.842	Danio_rerio
ENSPNAG00000006123	si:ch211-212k18.5	99	53.163	ENSELUG00000024534	si:ch211-212k18.5	98	55.694	Esox_lucius
ENSPNAG00000006123	si:ch211-212k18.5	57	70.732	ENSFHEG00000017550	sall2	67	70.732	Fundulus_heteroclitus
ENSPNAG00000006123	si:ch211-212k18.5	99	55.860	ENSFHEG00000017264	si:ch211-212k18.5	93	67.328	Fundulus_heteroclitus
ENSPNAG00000006123	si:ch211-212k18.5	94	57.131	ENSGAFG00000003746	si:ch211-212k18.5	95	56.034	Gambusia_affinis
ENSPNAG00000006123	si:ch211-212k18.5	99	54.061	ENSHBUG00000019672	si:ch211-212k18.5	99	56.303	Haplochromis_burtoni
ENSPNAG00000006123	si:ch211-212k18.5	74	72.973	ENSHBUG00000002882	sall2	71	72.973	Haplochromis_burtoni
ENSPNAG00000006123	si:ch211-212k18.5	94	53.274	ENSHCOG00000002842	si:ch211-212k18.5	75	85.714	Hippocampus_comes
ENSPNAG00000006123	si:ch211-212k18.5	100	76.427	ENSIPUG00000002559	sall2	100	76.264	Ictalurus_punctatus
ENSPNAG00000006123	si:ch211-212k18.5	51	56.000	ENSJJAG00000020688	Sall4	50	66.154	Jaculus_jaculus
ENSPNAG00000006123	si:ch211-212k18.5	59	71.795	ENSKMAG00000020172	sall2	66	71.795	Kryptolebias_marmoratus
ENSPNAG00000006123	si:ch211-212k18.5	94	55.462	ENSKMAG00000019657	si:ch211-212k18.5	95	56.292	Kryptolebias_marmoratus
ENSPNAG00000006123	si:ch211-212k18.5	94	57.618	ENSLBEG00000020887	si:ch211-212k18.5	94	57.469	Labrus_bergylta
ENSPNAG00000006123	si:ch211-212k18.5	61	72.973	ENSMAMG00000016229	sall2	58	72.973	Mastacembelus_armatus
ENSPNAG00000006123	si:ch211-212k18.5	70	65.564	ENSMAMG00000015887	si:ch211-212k18.5	99	66.477	Mastacembelus_armatus
ENSPNAG00000006123	si:ch211-212k18.5	74	72.973	ENSMZEG00005012103	sall2	71	72.973	Maylandia_zebra
ENSPNAG00000006123	si:ch211-212k18.5	99	54.140	ENSMZEG00005021214	si:ch211-212k18.5	99	54.844	Maylandia_zebra
ENSPNAG00000006123	si:ch211-212k18.5	90	66.315	ENSMMOG00000012726	si:ch211-212k18.5	98	65.728	Mola_mola
ENSPNAG00000006123	si:ch211-212k18.5	99	52.389	ENSMALG00000000979	si:ch211-212k18.5	99	54.877	Monopterus_albus
ENSPNAG00000006123	si:ch211-212k18.5	94	43.723	ENSNBRG00000017645	sall2	77	47.995	Neolamprologus_brichardi
ENSPNAG00000006123	si:ch211-212k18.5	93	57.862	ENSNBRG00000023948	si:ch211-212k18.5	96	58.127	Neolamprologus_brichardi
ENSPNAG00000006123	si:ch211-212k18.5	94	54.305	ENSORLG00000030429	si:ch211-212k18.5	95	55.623	Oryzias_latipes
ENSPNAG00000006123	si:ch211-212k18.5	62	67.442	ENSORLG00000026871	sall2	67	67.442	Oryzias_latipes
ENSPNAG00000006123	si:ch211-212k18.5	99	52.989	ENSORLG00020008145	si:ch211-212k18.5	95	55.603	Oryzias_latipes_hni
ENSPNAG00000006123	si:ch211-212k18.5	62	67.442	ENSORLG00020007873	sall2	67	67.442	Oryzias_latipes_hni
ENSPNAG00000006123	si:ch211-212k18.5	94	54.283	ENSORLG00015004982	si:ch211-212k18.5	95	54.966	Oryzias_latipes_hsok
ENSPNAG00000006123	si:ch211-212k18.5	62	67.442	ENSORLG00015002422	sall2	67	67.442	Oryzias_latipes_hsok
ENSPNAG00000006123	si:ch211-212k18.5	99	52.370	ENSOMEG00000013949	si:ch211-212k18.5	95	54.639	Oryzias_melastigma
ENSPNAG00000006123	si:ch211-212k18.5	71	53.753	ENSPKIG00000009207	sall2	92	44.530	Paramormyrops_kingsleyae
ENSPNAG00000006123	si:ch211-212k18.5	93	55.338	ENSPMGG00000018714	si:ch211-212k18.5	99	54.839	Periophthalmus_magnuspinnatus
ENSPNAG00000006123	si:ch211-212k18.5	57	70.000	ENSPFOG00000016504	sall2	50	70.000	Poecilia_formosa
ENSPNAG00000006123	si:ch211-212k18.5	94	56.895	ENSPFOG00000023705	si:ch211-212k18.5	99	56.207	Poecilia_formosa
ENSPNAG00000006123	si:ch211-212k18.5	99	54.362	ENSPLAG00000002577	si:ch211-212k18.5	99	54.140	Poecilia_latipinna
ENSPNAG00000006123	si:ch211-212k18.5	57	70.000	ENSPLAG00000018320	sall2	50	70.000	Poecilia_latipinna
ENSPNAG00000006123	si:ch211-212k18.5	57	70.000	ENSPMEG00000006335	sall2	50	70.000	Poecilia_mexicana
ENSPNAG00000006123	si:ch211-212k18.5	94	56.181	ENSPMEG00000016395	si:ch211-212k18.5	99	56.110	Poecilia_mexicana
ENSPNAG00000006123	si:ch211-212k18.5	95	55.751	ENSPREG00000005292	si:ch211-212k18.5	96	55.855	Poecilia_reticulata
ENSPNAG00000006123	si:ch211-212k18.5	57	70.000	ENSPREG00000021908	sall2	52	70.000	Poecilia_reticulata
ENSPNAG00000006123	si:ch211-212k18.5	99	54.627	ENSPNYG00000021576	si:ch211-212k18.5	99	55.684	Pundamilia_nyererei
ENSPNAG00000006123	si:ch211-212k18.5	99	56.494	ENSSMAG00000006241	si:ch211-212k18.5	99	56.525	Scophthalmus_maximus
ENSPNAG00000006123	si:ch211-212k18.5	74	72.093	ENSSMAG00000014157	sall2	68	47.029	Scophthalmus_maximus
ENSPNAG00000006123	si:ch211-212k18.5	74	67.442	ENSSDUG00000012274	sall2	62	67.442	Seriola_dumerili
ENSPNAG00000006123	si:ch211-212k18.5	98	57.959	ENSSDUG00000006164	si:ch211-212k18.5	98	58.477	Seriola_dumerili
ENSPNAG00000006123	si:ch211-212k18.5	98	58.238	ENSSLDG00000003393	si:ch211-212k18.5	98	58.286	Seriola_lalandi_dorsalis
ENSPNAG00000006123	si:ch211-212k18.5	93	59.617	ENSSPAG00000013435	si:ch211-212k18.5	97	58.726	Stegastes_partitus
ENSPNAG00000006123	si:ch211-212k18.5	65	67.442	ENSSPAG00000023009	sall2	67	45.659	Stegastes_partitus
ENSPNAG00000006123	si:ch211-212k18.5	86	64.437	ENSTRUG00000025082	si:ch211-212k18.5	96	64.202	Takifugu_rubripes
ENSPNAG00000006123	si:ch211-212k18.5	61	51.389	ENSTRUG00000024556	sall2	66	51.389	Takifugu_rubripes
ENSPNAG00000006123	si:ch211-212k18.5	95	55.942	ENSXCOG00000000762	si:ch211-212k18.5	96	56.874	Xiphophorus_couchianus
ENSPNAG00000006123	si:ch211-212k18.5	54	47.074	ENSXMAG00000000902	sall2	50	70.000	Xiphophorus_maculatus
ENSPNAG00000006123	si:ch211-212k18.5	95	55.314	ENSXMAG00000001461	si:ch211-212k18.5	96	55.919	Xiphophorus_maculatus