EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000006166 (Gene tree)
Gene ID: 108444511
Gene Symbol: htatsf1
Alias: zgc:66252
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 6087 bases
Position: chrKV575942.1:219634-225720
Accession: 108444511
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000021454	RRM_1	PF00076.22	3.7e-14	1	1
ENSPNAP00000037167	RRM_1	PF00076.22	5.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000032777	-	1395	XM_017725716	ENSPNAP00000037167	464 (aa)	XP_017581205	UPI0008145793
ENSPNAT00000032766	-	1266	-	ENSPNAP00000021454	421 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000006166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000006166's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000006166	htatsf1	79	65.278	ENSG00000102241	HTATSF1	100	59.641	Homo_sapiens
ENSPNAG00000006166	htatsf1	99	70.664	ENSAPOG00000009823	htatsf1	99	70.236	Acanthochromis_polyacanthus
ENSPNAG00000006166	htatsf1	100	70.726	ENSACIG00000020459	htatsf1	99	69.665	Amphilophus_citrinellus
ENSPNAG00000006166	htatsf1	99	69.444	ENSAOCG00000020994	htatsf1	99	70.426	Amphiprion_ocellaris
ENSPNAG00000006166	htatsf1	99	70.878	ENSAPEG00000016432	htatsf1	99	70.878	Amphiprion_percula
ENSPNAG00000006166	htatsf1	96	69.438	ENSATEG00000008903	htatsf1	94	68.222	Anabas_testudineus
ENSPNAG00000006166	htatsf1	91	62.774	ENSAPLG00000012401	HTATSF1	99	61.557	Anas_platyrhynchos
ENSPNAG00000006166	htatsf1	87	59.268	ENSACAG00000009346	HTATSF1	98	60.095	Anolis_carolinensis
ENSPNAG00000006166	htatsf1	99	68.776	ENSACLG00000008096	htatsf1	99	68.607	Astatotilapia_calliptera
ENSPNAG00000006166	htatsf1	100	80.892	ENSAMXG00000008387	htatsf1	100	81.104	Astyanax_mexicanus
ENSPNAG00000006166	htatsf1	95	57.746	ENSBTAG00000032711	HTATSF1	51	62.933	Bos_taurus
ENSPNAG00000006166	htatsf1	72	40.176	WBGene00022025	Y65B4A.1	71	40.256	Caenorhabditis_elegans
ENSPNAG00000006166	htatsf1	78	65.242	ENSCJAG00000003676	HTATSF1	50	61.614	Callithrix_jacchus
ENSPNAG00000006166	htatsf1	95	59.155	ENSCAFG00000023294	HTATSF1	50	64.533	Canis_familiaris
ENSPNAG00000006166	htatsf1	78	64.387	ENSCCAG00000025329	-	54	65.041	Cebus_capucinus
ENSPNAG00000006166	htatsf1	99	61.830	ENSCPBG00000026092	HTATSF1	99	61.745	Chrysemys_picta_bellii
ENSPNAG00000006166	htatsf1	81	56.250	ENSCING00000005914	-	86	45.404	Ciona_intestinalis
ENSPNAG00000006166	htatsf1	90	40.977	ENSCSAVG00000000371	-	77	44.044	Ciona_savignyi
ENSPNAG00000006166	htatsf1	99	70.626	ENSCVAG00000014070	htatsf1	98	68.973	Cyprinodon_variegatus
ENSPNAG00000006166	htatsf1	99	70.940	ENSDARG00000056649	htatsf1	99	70.513	Danio_rerio
ENSPNAG00000006166	htatsf1	83	42.784	FBgn0037081	barc	67	43.814	Drosophila_melanogaster
ENSPNAG00000006166	htatsf1	90	53.271	ENSEBUG00000001534	htatsf1	84	53.271	Eptatretus_burgeri
ENSPNAG00000006166	htatsf1	90	62.344	ENSEASG00005003440	HTATSF1	51	62.095	Equus_asinus_asinus
ENSPNAG00000006166	htatsf1	90	62.095	ENSECAG00000009156	HTATSF1	51	62.095	Equus_caballus
ENSPNAG00000006166	htatsf1	99	66.519	ENSELUG00000005486	htatsf1	90	66.519	Esox_lucius
ENSPNAG00000006166	htatsf1	95	59.859	ENSFCAG00000031924	HTATSF1	50	65.333	Felis_catus
ENSPNAG00000006166	htatsf1	100	61.504	ENSFALG00000003728	HTATSF1	99	60.619	Ficedula_albicollis
ENSPNAG00000006166	htatsf1	99	70.905	ENSFHEG00000020286	htatsf1	99	70.905	Fundulus_heteroclitus
ENSPNAG00000006166	htatsf1	81	69.867	ENSGMOG00000016444	htatsf1	100	69.867	Gadus_morhua
ENSPNAG00000006166	htatsf1	100	62.361	ENSGALG00000006410	HTATSF1	99	61.277	Gallus_gallus
ENSPNAG00000006166	htatsf1	99	70.815	ENSGAFG00000003041	htatsf1	98	69.742	Gambusia_affinis
ENSPNAG00000006166	htatsf1	99	68.230	ENSGACG00000020459	htatsf1	99	67.333	Gasterosteus_aculeatus
ENSPNAG00000006166	htatsf1	99	68.776	ENSHBUG00000004392	htatsf1	99	68.607	Haplochromis_burtoni
ENSPNAG00000006166	htatsf1	100	65.302	ENSHCOG00000009056	htatsf1	100	64.222	Hippocampus_comes
ENSPNAG00000006166	htatsf1	100	71.166	ENSIPUG00000017828	htatsf1	100	71.605	Ictalurus_punctatus
ENSPNAG00000006166	htatsf1	79	65.826	ENSSTOG00000012505	HTATSF1	51	66.223	Ictidomys_tridecemlineatus
ENSPNAG00000006166	htatsf1	99	70.905	ENSKMAG00000007622	htatsf1	99	68.017	Kryptolebias_marmoratus
ENSPNAG00000006166	htatsf1	100	67.932	ENSLBEG00000001154	htatsf1	99	67.511	Labrus_bergylta
ENSPNAG00000006166	htatsf1	99	59.775	ENSLACG00000015989	HTATSF1	99	59.459	Latimeria_chalumnae
ENSPNAG00000006166	htatsf1	99	47.712	ENSLOCG00000015118	htatsf1	99	47.358	Lepisosteus_oculatus
ENSPNAG00000006166	htatsf1	85	65.354	ENSLAFG00000014307	HTATSF1	56	64.304	Loxodonta_africana
ENSPNAG00000006166	htatsf1	94	58.929	ENSMNEG00000024084	HTATSF1	61	60.859	Macaca_nemestrina
ENSPNAG00000006166	htatsf1	99	69.397	ENSMAMG00000021225	htatsf1	99	68.499	Mastacembelus_armatus
ENSPNAG00000006166	htatsf1	99	68.776	ENSMZEG00005000485	htatsf1	99	68.607	Maylandia_zebra
ENSPNAG00000006166	htatsf1	94	63.098	ENSMGAG00000003558	HTATSF1	97	62.415	Meleagris_gallopavo
ENSPNAG00000006166	htatsf1	81	62.371	ENSMAUG00000007235	Htatsf1	50	64.286	Mesocricetus_auratus
ENSPNAG00000006166	htatsf1	79	62.912	ENSMICG00000009348	HTATSF1	50	64.611	Microcebus_murinus
ENSPNAG00000006166	htatsf1	79	66.106	ENSMOCG00000023007	-	50	66.400	Microtus_ochrogaster
ENSPNAG00000006166	htatsf1	100	68.026	ENSMMOG00000011013	htatsf1	100	66.949	Mola_mola
ENSPNAG00000006166	htatsf1	99	61.211	ENSMODG00000014087	-	97	61.211	Monodelphis_domestica
ENSPNAG00000006166	htatsf1	56	60.370	ENSMODG00000000199	-	91	60.965	Monodelphis_domestica
ENSPNAG00000006166	htatsf1	99	67.865	ENSMALG00000019977	htatsf1	99	66.809	Monopterus_albus
ENSPNAG00000006166	htatsf1	81	62.857	MGP_CAROLIEiJ_G0033094	Htatsf1	50	64.706	Mus_caroli
ENSPNAG00000006166	htatsf1	79	65.169	ENSMUSG00000067873	Htatsf1	50	62.592	Mus_musculus
ENSPNAG00000006166	htatsf1	79	64.888	MGP_SPRETEiJ_G0034249	Htatsf1	50	61.858	Mus_spretus
ENSPNAG00000006166	htatsf1	97	58.042	ENSMLUG00000028418	-	54	59.322	Myotis_lucifugus
ENSPNAG00000006166	htatsf1	93	59.903	ENSMLUG00000009234	-	50	65.289	Myotis_lucifugus
ENSPNAG00000006166	htatsf1	93	61.205	ENSNGAG00000017831	Htatsf1	53	63.291	Nannospalax_galili
ENSPNAG00000006166	htatsf1	99	68.776	ENSNBRG00000003818	htatsf1	99	68.607	Neolamprologus_brichardi
ENSPNAG00000006166	htatsf1	82	68.835	ENSMEUG00000004133	-	89	68.835	Notamacropus_eugenii
ENSPNAG00000006166	htatsf1	99	68.776	ENSONIG00000008638	htatsf1	99	68.607	Oreochromis_niloticus
ENSPNAG00000006166	htatsf1	91	61.671	ENSOANG00000011674	-	99	61.671	Ornithorhynchus_anatinus
ENSPNAG00000006166	htatsf1	99	65.532	ENSORLG00000002356	htatsf1	99	65.466	Oryzias_latipes
ENSPNAG00000006166	htatsf1	99	65.678	ENSORLG00020017818	htatsf1	96	64.632	Oryzias_latipes_hni
ENSPNAG00000006166	htatsf1	99	65.393	ENSORLG00015002268	htatsf1	99	65.328	Oryzias_latipes_hsok
ENSPNAG00000006166	htatsf1	99	67.722	ENSOMEG00000007564	htatsf1	99	67.089	Oryzias_melastigma
ENSPNAG00000006166	htatsf1	95	60.329	ENSPPRG00000014209	HTATSF1	50	65.867	Panthera_pardus
ENSPNAG00000006166	htatsf1	99	70.295	ENSPKIG00000024852	htatsf1	99	70.295	Paramormyrops_kingsleyae
ENSPNAG00000006166	htatsf1	82	65.330	ENSPSIG00000010192	HTATSF1	96	68.713	Pelodiscus_sinensis
ENSPNAG00000006166	htatsf1	100	66.810	ENSPMGG00000006172	htatsf1	100	66.379	Periophthalmus_magnuspinnatus
ENSPNAG00000006166	htatsf1	90	63.119	ENSPEMG00000022397	Htatsf1	51	63.131	Peromyscus_maniculatus_bairdii
ENSPNAG00000006166	htatsf1	99	56.818	ENSPCIG00000018896	-	98	56.818	Phascolarctos_cinereus
ENSPNAG00000006166	htatsf1	84	65.672	ENSPCIG00000030173	-	86	66.931	Phascolarctos_cinereus
ENSPNAG00000006166	htatsf1	99	71.336	ENSPFOG00000007871	htatsf1	96	70.259	Poecilia_formosa
ENSPNAG00000006166	htatsf1	99	71.552	ENSPLAG00000007532	htatsf1	99	70.474	Poecilia_latipinna
ENSPNAG00000006166	htatsf1	99	71.336	ENSPMEG00000000352	htatsf1	99	70.474	Poecilia_mexicana
ENSPNAG00000006166	htatsf1	99	72.198	ENSPREG00000007811	htatsf1	99	72.198	Poecilia_reticulata
ENSPNAG00000006166	htatsf1	97	60.000	ENSPPYG00000020765	HTATSF1	55	60.859	Pongo_abelii
ENSPNAG00000006166	htatsf1	85	57.937	ENSPCAG00000010576	HTATSF1	53	57.672	Procavia_capensis
ENSPNAG00000006166	htatsf1	79	64.706	ENSPCOG00000021823	HTATSF1	50	65.600	Propithecus_coquereli
ENSPNAG00000006166	htatsf1	93	59.574	ENSPVAG00000010281	HTATSF1	54	65.508	Pteropus_vampyrus
ENSPNAG00000006166	htatsf1	99	68.776	ENSPNYG00000016693	htatsf1	99	68.607	Pundamilia_nyererei
ENSPNAG00000006166	htatsf1	51	33.480	YNL286W	-	76	33.482	Saccharomyces_cerevisiae
ENSPNAG00000006166	htatsf1	78	66.097	ENSSBOG00000027186	-	50	65.952	Saimiri_boliviensis_boliviensis
ENSPNAG00000006166	htatsf1	98	60.181	ENSSHAG00000018908	-	97	59.502	Sarcophilus_harrisii
ENSPNAG00000006166	htatsf1	85	66.667	ENSSHAG00000006440	-	97	67.380	Sarcophilus_harrisii
ENSPNAG00000006166	htatsf1	99	67.615	ENSSFOG00015012002	htatsf1	99	67.391	Scleropages_formosus
ENSPNAG00000006166	htatsf1	99	67.308	ENSSMAG00000002970	htatsf1	99	67.308	Scophthalmus_maximus
ENSPNAG00000006166	htatsf1	99	66.739	ENSSDUG00000020002	htatsf1	99	65.385	Seriola_dumerili
ENSPNAG00000006166	htatsf1	99	71.058	ENSSLDG00000016880	htatsf1	99	69.807	Seriola_lalandi_dorsalis
ENSPNAG00000006166	htatsf1	83	61.214	ENSSARG00000005193	HTATSF1	51	62.162	Sorex_araneus
ENSPNAG00000006166	htatsf1	99	61.197	ENSSPUG00000014767	HTATSF1	98	61.247	Sphenodon_punctatus
ENSPNAG00000006166	htatsf1	99	70.172	ENSSPAG00000000732	htatsf1	99	68.884	Stegastes_partitus
ENSPNAG00000006166	htatsf1	79	65.266	ENSSSCG00000023062	HTATSF1	67	58.874	Sus_scrofa
ENSPNAG00000006166	htatsf1	99	61.573	ENSTGUG00000002099	HTATSF1	99	60.944	Taeniopygia_guttata
ENSPNAG00000006166	htatsf1	99	67.603	ENSTRUG00000013383	htatsf1	99	67.171	Takifugu_rubripes
ENSPNAG00000006166	htatsf1	99	66.880	ENSTNIG00000016140	htatsf1	99	66.239	Tetraodon_nigroviridis
ENSPNAG00000006166	htatsf1	76	65.982	ENSTTRG00000002269	HTATSF1	58	65.103	Tursiops_truncatus
ENSPNAG00000006166	htatsf1	95	59.624	ENSUAMG00000012048	HTATSF1	57	59.624	Ursus_americanus
ENSPNAG00000006166	htatsf1	95	59.624	ENSUMAG00000010393	HTATSF1	55	57.609	Ursus_maritimus
ENSPNAG00000006166	htatsf1	100	58.244	ENSXETG00000019749	htatsf1	85	57.589	Xenopus_tropicalis
ENSPNAG00000006166	htatsf1	97	70.258	ENSXCOG00000006912	htatsf1	98	70.258	Xiphophorus_couchianus
ENSPNAG00000006166	htatsf1	99	71.336	ENSXMAG00000000490	htatsf1	99	70.474	Xiphophorus_maculatus