EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000006192 (Gene tree)
Gene ID: 108413352
Gene Symbol: ncl
Alias: fa12d03|wu:fa12d03|zgc:152810
Full Name: nucleolin
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 14354 bases
Position: chrKV576450.1:91956-106309
Accession: 108413352
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000018533	RRM_1	PF00076.22	1.1e-60	1	4
ENSPNAP00000018533	RRM_1	PF00076.22	1.1e-60	2	4
ENSPNAP00000018533	RRM_1	PF00076.22	1.1e-60	3	4
ENSPNAP00000018533	RRM_1	PF00076.22	1.1e-60	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000039009	-	2979	XM_017685827	ENSPNAP00000018533	727 (aa)	XP_017541316	UPI0008145758

Gene Model

Click here to download ENSPNAG00000006192's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000006192's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000006192	ncl	52	73.545	ENSAPOG00000023888	ncl	59	71.801	Acanthochromis_polyacanthus
ENSPNAG00000006192	ncl	65	40.741	ENSAPOG00000014534	-	67	43.669	Acanthochromis_polyacanthus
ENSPNAG00000006192	ncl	72	70.106	ENSACIG00000013234	ncl	62	69.312	Amphilophus_citrinellus
ENSPNAG00000006192	ncl	52	73.545	ENSAOCG00000003133	ncl	59	71.395	Amphiprion_ocellaris
ENSPNAG00000006192	ncl	55	42.579	ENSAOCG00000014792	-	61	42.338	Amphiprion_ocellaris
ENSPNAG00000006192	ncl	58	71.934	ENSAPEG00000002769	ncl	59	71.801	Amphiprion_percula
ENSPNAG00000006192	ncl	55	42.822	ENSAPEG00000013612	-	60	42.597	Amphiprion_percula
ENSPNAG00000006192	ncl	64	42.685	ENSATEG00000019862	-	80	45.995	Anabas_testudineus
ENSPNAG00000006192	ncl	51	59.631	ENSAPLG00000012897	-	63	58.421	Anas_platyrhynchos
ENSPNAG00000006192	ncl	56	78.398	ENSAMXG00000001647	ncl	80	83.278	Astyanax_mexicanus
ENSPNAG00000006192	ncl	52	72.559	ENSCSEG00000015089	ncl	62	70.188	Cynoglossus_semilaevis
ENSPNAG00000006192	ncl	51	72.000	ENSCVAG00000012600	ncl	61	71.327	Cyprinodon_variegatus
ENSPNAG00000006192	ncl	76	44.218	ENSEBUG00000016173	ncl	56	45.161	Eptatretus_burgeri
ENSPNAG00000006192	ncl	56	49.755	ENSELUG00000022826	-	80	51.604	Esox_lucius
ENSPNAG00000006192	ncl	52	67.460	ENSFHEG00000018000	ncl	65	67.062	Fundulus_heteroclitus
ENSPNAG00000006192	ncl	72	57.196	ENSGMOG00000001341	ncl	66	62.264	Gadus_morhua
ENSPNAG00000006192	ncl	51	60.105	ENSGALG00000032930	NCL	55	58.793	Gallus_gallus
ENSPNAG00000006192	ncl	52	69.312	ENSGAFG00000015375	ncl	57	68.246	Gambusia_affinis
ENSPNAG00000006192	ncl	72	60.727	ENSGACG00000008970	ncl	66	66.029	Gasterosteus_aculeatus
ENSPNAG00000006192	ncl	72	53.927	ENSGAGG00000013330	-	56	62.042	Gopherus_agassizii
ENSPNAG00000006192	ncl	51	69.867	ENSHBUG00000006869	ncl	60	68.322	Haplochromis_burtoni
ENSPNAG00000006192	ncl	57	63.702	ENSHCOG00000010234	ncl	60	66.200	Hippocampus_comes
ENSPNAG00000006192	ncl	54	43.350	ENSLBEG00000007915	-	66	43.299	Labrus_bergylta
ENSPNAG00000006192	ncl	58	71.801	ENSLBEG00000019073	ncl	62	71.190	Labrus_bergylta
ENSPNAG00000006192	ncl	59	50.356	ENSLACG00000022167	-	79	50.266	Latimeria_chalumnae
ENSPNAG00000006192	ncl	58	64.120	ENSLACG00000009328	ncl	63	64.055	Latimeria_chalumnae
ENSPNAG00000006192	ncl	50	69.252	ENSLOCG00000004828	ncl	57	67.294	Lepisosteus_oculatus
ENSPNAG00000006192	ncl	65	37.223	ENSMAMG00000003479	-	67	40.909	Mastacembelus_armatus
ENSPNAG00000006192	ncl	62	67.316	ENSMAMG00000002086	ncl	51	70.853	Mastacembelus_armatus
ENSPNAG00000006192	ncl	56	68.704	ENSMZEG00005017438	ncl	60	68.246	Maylandia_zebra
ENSPNAG00000006192	ncl	51	60.331	ENSMGAG00000008147	-	83	58.953	Meleagris_gallopavo
ENSPNAG00000006192	ncl	90	46.175	ENSMODG00000002470	-	54	57.662	Monodelphis_domestica
ENSPNAG00000006192	ncl	54	69.849	ENSMALG00000014827	ncl	58	70.352	Monopterus_albus
ENSPNAG00000006192	ncl	51	58.511	ENSMEUG00000012335	-	55	57.963	Notamacropus_eugenii
ENSPNAG00000006192	ncl	56	68.704	ENSONIG00000012508	ncl	59	68.246	Oreochromis_niloticus
ENSPNAG00000006192	ncl	52	39.062	ENSONIG00000010631	-	97	39.108	Oreochromis_niloticus
ENSPNAG00000006192	ncl	58	56.744	ENSOANG00000008732	-	61	59.635	Ornithorhynchus_anatinus
ENSPNAG00000006192	ncl	50	72.652	ENSORLG00000007055	ncl	57	70.142	Oryzias_latipes
ENSPNAG00000006192	ncl	51	39.075	ENSORLG00000004645	-	80	39.353	Oryzias_latipes
ENSPNAG00000006192	ncl	58	69.340	ENSORLG00020017943	ncl	57	70.142	Oryzias_latipes_hni
ENSPNAG00000006192	ncl	51	39.332	ENSORLG00020003497	-	72	39.623	Oryzias_latipes_hni
ENSPNAG00000006192	ncl	58	66.745	ENSORLG00015013815	ncl	84	71.197	Oryzias_latipes_hsok
ENSPNAG00000006192	ncl	52	38.765	ENSORLG00015006613	-	78	39.175	Oryzias_latipes_hsok
ENSPNAG00000006192	ncl	56	69.927	ENSOMEG00000020786	ncl	56	68.483	Oryzias_melastigma
ENSPNAG00000006192	ncl	53	38.404	ENSOMEG00000015864	-	82	38.903	Oryzias_melastigma
ENSPNAG00000006192	ncl	71	72.834	ENSPKIG00000002604	ncl	59	72.275	Paramormyrops_kingsleyae
ENSPNAG00000006192	ncl	58	72.104	ENSPMGG00000004709	ncl	61	70.000	Periophthalmus_magnuspinnatus
ENSPNAG00000006192	ncl	63	66.307	ENSPLAG00000024026	ncl	57	68.720	Poecilia_latipinna
ENSPNAG00000006192	ncl	56	68.704	ENSPNYG00000020494	ncl	60	68.246	Pundamilia_nyererei
ENSPNAG00000006192	ncl	55	51.478	ENSSHAG00000002702	-	72	50.108	Sarcophilus_harrisii
ENSPNAG00000006192	ncl	54	43.309	ENSSMAG00000007582	-	61	44.882	Scophthalmus_maximus
ENSPNAG00000006192	ncl	58	69.811	ENSSMAG00000021241	ncl	60	69.668	Scophthalmus_maximus
ENSPNAG00000006192	ncl	62	41.379	ENSSDUG00000010922	-	70	44.156	Seriola_dumerili
ENSPNAG00000006192	ncl	73	67.161	ENSSDUG00000006128	ncl	86	73.545	Seriola_dumerili
ENSPNAG00000006192	ncl	53	43.939	ENSSLDG00000015784	-	65	43.342	Seriola_lalandi_dorsalis
ENSPNAG00000006192	ncl	58	72.131	ENSSLDG00000002012	ncl	59	72.275	Seriola_lalandi_dorsalis
ENSPNAG00000006192	ncl	64	53.971	ENSSPUG00000008244	-	60	59.391	Sphenodon_punctatus
ENSPNAG00000006192	ncl	57	44.048	ENSSPAG00000001859	-	61	44.474	Stegastes_partitus
ENSPNAG00000006192	ncl	51	58.530	ENSTGUG00000009782	-	60	57.853	Taeniopygia_guttata
ENSPNAG00000006192	ncl	53	43.598	ENSXCOG00000003524	ncl	85	54.497	Xiphophorus_couchianus
ENSPNAG00000006192	ncl	52	40.253	ENSXCOG00000007369	-	89	41.053	Xiphophorus_couchianus