EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000006339 (Gene tree)
Gene ID: 108427076
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 11185 bases
Position: chrKV575333.1:2666553-2677737
Accession: 108427076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000022070	tRNA_Me_trans	PF03054.16	7.3e-135	1	1
ENSPNAP00000037519	tRNA_Me_trans	PF03054.16	9.4e-127	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000033918	-	1715	-	ENSPNAP00000037519	411 (aa)	-	-
ENSPNAT00000033938	-	3031	XM_017697006	ENSPNAP00000022070	426 (aa)	XP_017552495	UPI00081480AE

Gene Model

Click here to download ENSPNAG00000006339's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000006339's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000006339	trmu	93	71.139	ENSG00000100416	TRMU	100	75.000	Homo_sapiens
ENSPNAG00000006339	trmu	93	80.506	ENSAPOG00000014458	trmu	95	80.506	Acanthochromis_polyacanthus
ENSPNAG00000006339	trmu	92	71.756	ENSAMEG00000003319	TRMU	94	71.756	Ailuropoda_melanoleuca
ENSPNAG00000006339	trmu	97	76.923	ENSACIG00000002101	trmu	100	76.923	Amphilophus_citrinellus
ENSPNAG00000006339	trmu	93	81.266	ENSAOCG00000013155	trmu	95	81.266	Amphiprion_ocellaris
ENSPNAG00000006339	trmu	93	81.013	ENSAPEG00000013350	trmu	95	81.013	Amphiprion_percula
ENSPNAG00000006339	trmu	96	79.075	ENSATEG00000007814	trmu	100	79.075	Anabas_testudineus
ENSPNAG00000006339	trmu	86	72.283	ENSAPLG00000016380	TRMU	94	72.283	Anas_platyrhynchos
ENSPNAG00000006339	trmu	92	72.449	ENSACAG00000007720	TRMU	94	72.449	Anolis_carolinensis
ENSPNAG00000006339	trmu	97	68.116	ENSANAG00000038053	TRMU	98	68.116	Aotus_nancymaae
ENSPNAG00000006339	trmu	97	78.846	ENSACLG00000005395	trmu	100	78.846	Astatotilapia_calliptera
ENSPNAG00000006339	trmu	97	89.346	ENSAMXG00000005282	trmu	100	89.346	Astyanax_mexicanus
ENSPNAG00000006339	trmu	93	71.899	ENSBTAG00000005595	TRMU	95	71.899	Bos_taurus
ENSPNAG00000006339	trmu	91	41.099	WBGene00007114	mttu-1	98	41.538	Caenorhabditis_elegans
ENSPNAG00000006339	trmu	97	67.961	ENSCJAG00000000198	TRMU	98	67.961	Callithrix_jacchus
ENSPNAG00000006339	trmu	93	72.152	ENSCAFG00000000779	TRMU	93	72.152	Canis_familiaris
ENSPNAG00000006339	trmu	93	72.152	ENSCAFG00020009184	TRMU	93	72.152	Canis_lupus_dingo
ENSPNAG00000006339	trmu	93	71.392	ENSCHIG00000017074	TRMU	95	71.392	Capra_hircus
ENSPNAG00000006339	trmu	96	71.253	ENSTSYG00000003853	TRMU	97	71.253	Carlito_syrichta
ENSPNAG00000006339	trmu	93	65.700	ENSCAPG00000013034	TRMU	97	65.700	Cavia_aperea
ENSPNAG00000006339	trmu	96	70.025	ENSCPOG00000020780	TRMU	97	70.025	Cavia_porcellus
ENSPNAG00000006339	trmu	97	68.204	ENSCCAG00000021641	TRMU	98	68.204	Cebus_capucinus
ENSPNAG00000006339	trmu	93	70.886	ENSCATG00000032800	TRMU	94	70.886	Cercocebus_atys
ENSPNAG00000006339	trmu	96	70.560	ENSCLAG00000017269	TRMU	98	70.560	Chinchilla_lanigera
ENSPNAG00000006339	trmu	93	71.139	ENSCSAG00000005279	TRMU	94	71.139	Chlorocebus_sabaeus
ENSPNAG00000006339	trmu	86	72.283	ENSCPBG00000011621	TRMU	92	72.283	Chrysemys_picta_bellii
ENSPNAG00000006339	trmu	93	45.340	ENSCING00000019371	-	97	45.340	Ciona_intestinalis
ENSPNAG00000006339	trmu	93	70.886	ENSCANG00000041645	TRMU	94	70.886	Colobus_angolensis_palliatus
ENSPNAG00000006339	trmu	96	69.268	ENSCGRG00001001739	Trmu	98	69.268	Cricetulus_griseus_chok1gshd
ENSPNAG00000006339	trmu	96	64.634	ENSCGRG00000002781	Trmu	98	64.634	Cricetulus_griseus_crigri
ENSPNAG00000006339	trmu	96	72.749	ENSCSEG00000012382	trmu	99	72.749	Cynoglossus_semilaevis
ENSPNAG00000006339	trmu	96	77.616	ENSCVAG00000001366	trmu	99	77.616	Cyprinodon_variegatus
ENSPNAG00000006339	trmu	93	81.013	ENSDARG00000043734	trmu	95	81.013	Danio_rerio
ENSPNAG00000006339	trmu	61	57.252	ENSDNOG00000047245	-	94	56.089	Dasypus_novemcinctus
ENSPNAG00000006339	trmu	95	71.040	ENSDORG00000007455	Trmu	98	71.040	Dipodomys_ordii
ENSPNAG00000006339	trmu	88	43.700	FBgn0040337	CG3021	97	43.797	Drosophila_melanogaster
ENSPNAG00000006339	trmu	91	56.010	ENSEBUG00000007454	trmu	100	54.179	Eptatretus_burgeri
ENSPNAG00000006339	trmu	93	71.899	ENSEASG00005021725	TRMU	94	71.899	Equus_asinus_asinus
ENSPNAG00000006339	trmu	93	71.899	ENSECAG00000000467	TRMU	94	71.899	Equus_caballus
ENSPNAG00000006339	trmu	69	51.361	ENSEEUG00000000074	-	76	81.481	Erinaceus_europaeus
ENSPNAG00000006339	trmu	93	82.828	ENSELUG00000009464	trmu	99	82.065	Esox_lucius
ENSPNAG00000006339	trmu	93	72.658	ENSFCAG00000006533	TRMU	94	72.658	Felis_catus
ENSPNAG00000006339	trmu	91	68.861	ENSFALG00000010035	TRMU	98	68.861	Ficedula_albicollis
ENSPNAG00000006339	trmu	89	70.526	ENSFDAG00000017472	TRMU	97	70.526	Fukomys_damarensis
ENSPNAG00000006339	trmu	95	78.922	ENSFHEG00000003162	trmu	98	79.837	Fundulus_heteroclitus
ENSPNAG00000006339	trmu	92	72.362	ENSGMOG00000001323	trmu	98	72.362	Gadus_morhua
ENSPNAG00000006339	trmu	93	71.712	ENSGALG00000031922	TRMU	95	71.712	Gallus_gallus
ENSPNAG00000006339	trmu	96	79.268	ENSGAFG00000013331	trmu	98	79.268	Gambusia_affinis
ENSPNAG00000006339	trmu	96	77.273	ENSGACG00000019024	trmu	99	77.273	Gasterosteus_aculeatus
ENSPNAG00000006339	trmu	93	70.886	ENSGGOG00000000203	TRMU	94	70.886	Gorilla_gorilla
ENSPNAG00000006339	trmu	97	78.365	ENSHBUG00000023421	trmu	100	78.365	Haplochromis_burtoni
ENSPNAG00000006339	trmu	96	70.732	ENSHGLG00000009278	TRMU	97	70.732	Heterocephalus_glaber_female
ENSPNAG00000006339	trmu	96	70.732	ENSHGLG00100018863	TRMU	97	70.732	Heterocephalus_glaber_male
ENSPNAG00000006339	trmu	97	78.398	ENSHCOG00000013459	trmu	99	78.398	Hippocampus_comes
ENSPNAG00000006339	trmu	93	89.873	ENSIPUG00000009785	trmu	97	89.873	Ictalurus_punctatus
ENSPNAG00000006339	trmu	97	68.841	ENSSTOG00000010993	TRMU	98	68.841	Ictidomys_tridecemlineatus
ENSPNAG00000006339	trmu	96	69.042	ENSJJAG00000000667	Trmu	98	69.042	Jaculus_jaculus
ENSPNAG00000006339	trmu	96	77.129	ENSKMAG00000008516	trmu	99	77.129	Kryptolebias_marmoratus
ENSPNAG00000006339	trmu	96	78.345	ENSLBEG00000018831	trmu	99	78.345	Labrus_bergylta
ENSPNAG00000006339	trmu	96	73.798	ENSLACG00000013713	TRMU	99	73.798	Latimeria_chalumnae
ENSPNAG00000006339	trmu	97	79.903	ENSLOCG00000016066	trmu	99	79.903	Lepisosteus_oculatus
ENSPNAG00000006339	trmu	97	60.723	ENSLAFG00000005129	TRMU	98	60.723	Loxodonta_africana
ENSPNAG00000006339	trmu	93	71.139	ENSMFAG00000039767	TRMU	94	71.139	Macaca_fascicularis
ENSPNAG00000006339	trmu	93	71.139	ENSMMUG00000000807	TRMU	94	71.139	Macaca_mulatta
ENSPNAG00000006339	trmu	93	71.139	ENSMNEG00000028164	TRMU	94	71.139	Macaca_nemestrina
ENSPNAG00000006339	trmu	93	70.886	ENSMLEG00000033884	TRMU	94	70.886	Mandrillus_leucophaeus
ENSPNAG00000006339	trmu	96	78.589	ENSMAMG00000004717	trmu	99	78.589	Mastacembelus_armatus
ENSPNAG00000006339	trmu	97	78.846	ENSMZEG00005015797	trmu	100	78.846	Maylandia_zebra
ENSPNAG00000006339	trmu	74	72.050	ENSMGAG00000007550	TRMU	94	72.050	Meleagris_gallopavo
ENSPNAG00000006339	trmu	96	69.024	ENSMAUG00000022282	Trmu	98	69.024	Mesocricetus_auratus
ENSPNAG00000006339	trmu	93	71.646	ENSMICG00000029046	TRMU	96	71.646	Microcebus_murinus
ENSPNAG00000006339	trmu	96	69.586	ENSMOCG00000014641	Trmu	99	69.586	Microtus_ochrogaster
ENSPNAG00000006339	trmu	96	77.995	ENSMMOG00000007229	trmu	98	77.995	Mola_mola
ENSPNAG00000006339	trmu	96	66.341	ENSMODG00000007433	TRMU	96	66.341	Monodelphis_domestica
ENSPNAG00000006339	trmu	96	78.345	ENSMALG00000007721	trmu	99	78.345	Monopterus_albus
ENSPNAG00000006339	trmu	96	68.613	MGP_CAROLIEiJ_G0020134	Trmu	99	68.613	Mus_caroli
ENSPNAG00000006339	trmu	96	68.780	ENSMUSG00000022386	Trmu	98	68.780	Mus_musculus
ENSPNAG00000006339	trmu	96	68.537	MGP_PahariEiJ_G0020139	Trmu	98	68.537	Mus_pahari
ENSPNAG00000006339	trmu	96	68.780	MGP_SPRETEiJ_G0021031	Trmu	98	68.780	Mus_spretus
ENSPNAG00000006339	trmu	93	72.152	ENSMPUG00000002523	TRMU	94	72.152	Mustela_putorius_furo
ENSPNAG00000006339	trmu	97	70.048	ENSNGAG00000005132	Trmu	99	70.048	Nannospalax_galili
ENSPNAG00000006339	trmu	97	78.606	ENSNBRG00000022690	trmu	100	78.606	Neolamprologus_brichardi
ENSPNAG00000006339	trmu	96	69.175	ENSNLEG00000015773	TRMU	98	69.175	Nomascus_leucogenys
ENSPNAG00000006339	trmu	79	58.896	ENSMEUG00000000216	TRMU	98	58.896	Notamacropus_eugenii
ENSPNAG00000006339	trmu	96	69.586	ENSODEG00000014745	TRMU	98	69.853	Octodon_degus
ENSPNAG00000006339	trmu	97	78.606	ENSONIG00000009821	trmu	100	78.606	Oreochromis_niloticus
ENSPNAG00000006339	trmu	86	70.270	ENSOANG00000001891	TRMU	94	70.270	Ornithorhynchus_anatinus
ENSPNAG00000006339	trmu	89	69.474	ENSOCUG00000003664	TRMU	95	68.342	Oryctolagus_cuniculus
ENSPNAG00000006339	trmu	94	76.559	ENSORLG00000019015	trmu	97	76.559	Oryzias_latipes
ENSPNAG00000006339	trmu	94	76.060	ENSORLG00020006830	trmu	97	76.060	Oryzias_latipes_hni
ENSPNAG00000006339	trmu	94	76.060	ENSORLG00015003907	trmu	97	76.060	Oryzias_latipes_hsok
ENSPNAG00000006339	trmu	53	79.736	ENSOMEG00000015541	trmu	82	79.736	Oryzias_melastigma
ENSPNAG00000006339	trmu	93	70.886	ENSOGAG00000008096	TRMU	95	70.886	Otolemur_garnettii
ENSPNAG00000006339	trmu	90	68.835	ENSOARG00000019475	TRMU	93	67.632	Ovis_aries
ENSPNAG00000006339	trmu	93	71.139	ENSPPAG00000033944	TRMU	94	71.139	Pan_paniscus
ENSPNAG00000006339	trmu	93	72.152	ENSPPRG00000004197	TRMU	94	72.152	Panthera_pardus
ENSPNAG00000006339	trmu	67	70.758	ENSPTIG00000014122	TRMU	97	72.624	Panthera_tigris_altaica
ENSPNAG00000006339	trmu	93	71.139	ENSPTRG00000014510	TRMU	94	71.139	Pan_troglodytes
ENSPNAG00000006339	trmu	93	70.886	ENSPANG00000023074	TRMU	97	67.397	Papio_anubis
ENSPNAG00000006339	trmu	97	78.072	ENSPKIG00000002849	trmu	100	78.072	Paramormyrops_kingsleyae
ENSPNAG00000006339	trmu	85	73.056	ENSPSIG00000013020	TRMU	94	73.056	Pelodiscus_sinensis
ENSPNAG00000006339	trmu	97	78.155	ENSPMGG00000004083	trmu	99	78.155	Periophthalmus_magnuspinnatus
ENSPNAG00000006339	trmu	96	69.024	ENSPEMG00000014007	Trmu	98	69.024	Peromyscus_maniculatus_bairdii
ENSPNAG00000006339	trmu	91	69.689	ENSPCIG00000009923	TRMU	93	69.192	Phascolarctos_cinereus
ENSPNAG00000006339	trmu	98	73.333	ENSPFOG00000008197	trmu	91	73.333	Poecilia_formosa
ENSPNAG00000006339	trmu	96	79.218	ENSPLAG00000008414	trmu	98	79.218	Poecilia_latipinna
ENSPNAG00000006339	trmu	96	79.462	ENSPMEG00000004326	trmu	98	79.462	Poecilia_mexicana
ENSPNAG00000006339	trmu	96	80.196	ENSPREG00000007980	trmu	98	80.196	Poecilia_reticulata
ENSPNAG00000006339	trmu	93	71.139	ENSPPYG00000011949	TRMU	94	71.139	Pongo_abelii
ENSPNAG00000006339	trmu	90	63.117	ENSPCAG00000013462	TRMU	98	63.117	Procavia_capensis
ENSPNAG00000006339	trmu	93	71.139	ENSPCOG00000016539	TRMU	95	71.139	Propithecus_coquereli
ENSPNAG00000006339	trmu	93	65.316	ENSPVAG00000013202	TRMU	95	65.316	Pteropus_vampyrus
ENSPNAG00000006339	trmu	97	78.846	ENSPNYG00000005629	trmu	100	78.846	Pundamilia_nyererei
ENSPNAG00000006339	trmu	96	68.293	ENSRNOG00000016465	Trmu	98	68.293	Rattus_norvegicus
ENSPNAG00000006339	trmu	93	70.633	ENSRBIG00000038973	TRMU	94	70.633	Rhinopithecus_bieti
ENSPNAG00000006339	trmu	93	70.886	ENSRROG00000004267	TRMU	94	70.886	Rhinopithecus_roxellana
ENSPNAG00000006339	trmu	89	34.158	YDL033C	SLM3	91	34.158	Saccharomyces_cerevisiae
ENSPNAG00000006339	trmu	93	70.886	ENSSBOG00000030184	TRMU	94	70.886	Saimiri_boliviensis_boliviensis
ENSPNAG00000006339	trmu	89	77.895	ENSSFOG00015020664	trmu	98	77.895	Scleropages_formosus
ENSPNAG00000006339	trmu	96	78.832	ENSSMAG00000019450	trmu	99	78.832	Scophthalmus_maximus
ENSPNAG00000006339	trmu	96	78.345	ENSSDUG00000011913	trmu	99	78.345	Seriola_dumerili
ENSPNAG00000006339	trmu	96	78.102	ENSSLDG00000011684	trmu	99	78.102	Seriola_lalandi_dorsalis
ENSPNAG00000006339	trmu	96	61.557	ENSSPUG00000017123	TRMU	98	61.557	Sphenodon_punctatus
ENSPNAG00000006339	trmu	96	77.372	ENSSPAG00000021875	trmu	99	77.372	Stegastes_partitus
ENSPNAG00000006339	trmu	93	70.633	ENSSSCG00000000007	TRMU	94	70.633	Sus_scrofa
ENSPNAG00000006339	trmu	86	73.442	ENSTGUG00000003663	-	99	73.442	Taeniopygia_guttata
ENSPNAG00000006339	trmu	96	77.995	ENSTRUG00000001231	trmu	99	77.995	Takifugu_rubripes
ENSPNAG00000006339	trmu	96	77.724	ENSTNIG00000010484	trmu	97	77.724	Tetraodon_nigroviridis
ENSPNAG00000006339	trmu	70	56.303	ENSTBEG00000011276	-	76	56.303	Tupaia_belangeri
ENSPNAG00000006339	trmu	93	71.139	ENSTTRG00000004160	TRMU	94	71.139	Tursiops_truncatus
ENSPNAG00000006339	trmu	71	72.509	ENSUAMG00000024825	TRMU	97	72.509	Ursus_americanus
ENSPNAG00000006339	trmu	91	58.915	ENSUMAG00000019079	TRMU	97	71.875	Ursus_maritimus
ENSPNAG00000006339	trmu	53	63.014	ENSVPAG00000000685	-	100	63.014	Vicugna_pacos
ENSPNAG00000006339	trmu	96	69.082	ENSVVUG00000024963	TRMU	98	69.082	Vulpes_vulpes
ENSPNAG00000006339	trmu	97	71.256	ENSXETG00000023304	trmu	97	71.256	Xenopus_tropicalis
ENSPNAG00000006339	trmu	96	77.913	ENSXCOG00000015105	trmu	98	77.913	Xiphophorus_couchianus
ENSPNAG00000006339	trmu	96	79.462	ENSXMAG00000006697	trmu	98	79.462	Xiphophorus_maculatus