EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000006431 (Gene tree)
Gene ID: 108427173
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-11B
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 12797 bases
Position: chrKV575334.1:1616193-1628989
Accession: 108427173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000019429	MMR_HSR1	PF01926.23	3.6e-07	1	1
ENSPNAP00000035770	MMR_HSR1	PF01926.23	4.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000029247	-	2147	XM_017697142	ENSPNAP00000019429	218 (aa)	XP_017552631	UPI0008147A48
ENSPNAT00000029252	-	787	-	ENSPNAP00000035770	225 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000006431's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000006431's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000006431	-	78	46.199	ENSPNAG00000002404	rab18b	83	46.199
ENSPNAG00000006431	-	88	34.715	ENSPNAG00000005519	-	88	34.715
ENSPNAG00000006431	-	96	40.000	ENSPNAG00000010760	rab30	98	40.000
ENSPNAG00000006431	-	95	37.799	ENSPNAG00000016567	rab42a	98	37.799
ENSPNAG00000006431	-	95	45.455	ENSPNAG00000013863	rab1ab	89	45.455
ENSPNAG00000006431	-	100	97.706	ENSPNAG00000020475	rab11ba	100	97.706
ENSPNAG00000006431	-	83	34.872	ENSPNAG00000021994	rab36	74	34.872
ENSPNAG00000006431	-	89	32.500	ENSPNAG00000028379	rab6ba	92	32.500
ENSPNAG00000006431	-	85	37.186	ENSPNAG00000020583	zgc:100918	97	37.186
ENSPNAG00000006431	-	74	34.146	ENSPNAG00000026295	si:ch73-116o1.2	82	35.795
ENSPNAG00000006431	-	63	30.070	ENSPNAG00000009887	arl4ab	72	30.070
ENSPNAG00000006431	-	74	32.353	ENSPNAG00000028497	si:cabz01085950.1	82	32.353
ENSPNAG00000006431	-	94	31.925	ENSPNAG00000003179	rab34a	80	31.925
ENSPNAG00000006431	-	78	54.386	ENSPNAG00000011193	rab2a	99	48.165
ENSPNAG00000006431	-	66	39.456	ENSPNAG00000014146	-	69	39.456
ENSPNAG00000006431	-	57	36.000	ENSPNAG00000008867	rab20	50	36.000
ENSPNAG00000006431	-	68	35.333	ENSPNAG00000000584	hrasb	85	36.420
ENSPNAG00000006431	-	99	81.106	ENSPNAG00000029085	rab11al	99	81.106
ENSPNAG00000006431	-	75	43.030	ENSPNAG00000015031	rab12	83	37.736
ENSPNAG00000006431	-	76	46.988	ENSPNAG00000015810	RAB15	80	46.988
ENSPNAG00000006431	-	99	64.516	ENSPNAG00000000694	rab25a	100	64.516
ENSPNAG00000006431	-	74	32.317	ENSPNAG00000013747	mras	82	34.091
ENSPNAG00000006431	-	89	32.161	ENSPNAG00000010157	rab6bb	91	32.161
ENSPNAG00000006431	-	80	45.198	ENSPNAG00000013589	rab39bb	83	45.198
ENSPNAG00000006431	-	74	44.444	ENSPNAG00000011215	rab15	76	44.444
ENSPNAG00000006431	-	100	65.909	ENSPNAG00000006569	rab25b	100	65.909
ENSPNAG00000006431	-	77	52.695	ENSPNAG00000014363	-	78	52.695
ENSPNAG00000006431	-	79	39.326	ENSPNAG00000007277	RAB9A	82	39.326
ENSPNAG00000006431	-	92	39.500	ENSPNAG00000003227	rab3c	92	39.500
ENSPNAG00000006431	-	94	41.262	ENSPNAG00000009496	rab5ab	90	41.262
ENSPNAG00000006431	-	73	35.000	ENSPNAG00000004728	rheb	86	35.000
ENSPNAG00000006431	-	71	34.568	ENSPNAG00000017466	rab38b	76	34.568
ENSPNAG00000006431	-	74	31.792	ENSPNAG00000007710	rasl11a	68	31.792
ENSPNAG00000006431	-	100	86.697	ENSPNAG00000014863	rab11a	100	86.697
ENSPNAG00000006431	-	96	45.933	ENSPNAG00000013004	rab1ba	99	45.933
ENSPNAG00000006431	-	75	41.818	ENSPNAG00000021675	-	77	41.818
ENSPNAG00000006431	-	94	41.627	ENSPNAG00000028138	rab5c	88	41.627
ENSPNAG00000006431	-	72	40.491	ENSPNAG00000015164	-	78	40.491
ENSPNAG00000006431	-	72	35.849	ENSPNAG00000024254	rabl2	69	35.849
ENSPNAG00000006431	-	72	30.000	ENSPNAG00000025213	arl11	89	30.000
ENSPNAG00000006431	-	70	34.839	ENSPNAG00000028629	kras	87	35.928
ENSPNAG00000006431	-	65	35.172	ENSPNAG00000015040	rab34b	66	37.179
ENSPNAG00000006431	-	79	45.977	ENSPNAG00000013897	rab39ba	82	45.977
ENSPNAG00000006431	-	94	42.233	ENSPNAG00000023223	rab5aa	90	42.233
ENSPNAG00000006431	-	94	35.238	ENSPNAG00000017938	RAB9A	89	35.238
ENSPNAG00000006431	-	68	36.184	ENSPNAG00000018361	rras	88	35.882
ENSPNAG00000006431	-	79	41.243	ENSPNAG00000018132	rab9b	78	41.243
ENSPNAG00000006431	-	72	40.491	ENSPNAG00000016600	-	78	40.491
ENSPNAG00000006431	-	96	45.755	ENSPNAG00000029574	zgc:171927	99	45.755
ENSPNAG00000006431	-	78	45.614	ENSPNAG00000011548	rab18a	85	45.614
ENSPNAG00000006431	-	91	47.475	ENSPNAG00000012540	-	96	47.475
ENSPNAG00000006431	-	72	38.217	ENSPNAG00000021737	rab41	74	38.217
ENSPNAG00000006431	-	81	46.591	ENSPNAG00000004189	rab13	93	46.591
ENSPNAG00000006431	-	80	45.402	ENSPNAG00000018986	si:dkey-16l2.16	98	41.627
ENSPNAG00000006431	-	51	31.092	ENSPNAG00000007188	ARL4D	56	31.092
ENSPNAG00000006431	-	86	34.759	ENSPNAG00000024728	rab23	95	31.731
ENSPNAG00000006431	-	82	38.587	ENSPNAG00000022929	rab33a	59	38.587
ENSPNAG00000006431	-	94	37.681	ENSPNAG00000017856	zgc:101559	86	37.681
ENSPNAG00000006431	-	68	35.333	ENSPNAG00000014085	hrasa	85	36.420
ENSPNAG00000006431	-	81	46.023	ENSPNAG00000014046	-	91	44.565
ENSPNAG00000006431	-	74	43.478	ENSPNAG00000015161	rab22a	82	43.478
ENSPNAG00000006431	-	78	38.674	ENSPNAG00000029115	rab33ba	81	38.674
ENSPNAG00000006431	-	75	47.239	ENSPNAG00000002218	-	92	41.748

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000006431	-	100	97.706	ENSG00000185236	RAB11B	100	100.000	Homo_sapiens
ENSPNAG00000006431	-	99	96.347	ENSAMEG00000004955	RAB11B	99	96.347	Ailuropoda_melanoleuca
ENSPNAG00000006431	-	86	89.840	ENSACIG00000024374	rab11ba	77	89.840	Amphilophus_citrinellus
ENSPNAG00000006431	-	100	94.954	ENSAOCG00000018050	rab11ba	100	94.954	Amphiprion_ocellaris
ENSPNAG00000006431	-	100	94.495	ENSAPEG00000009177	rab11ba	100	94.495	Amphiprion_percula
ENSPNAG00000006431	-	100	95.872	ENSATEG00000023730	rab11ba	100	95.872	Anabas_testudineus
ENSPNAG00000006431	-	100	97.706	ENSANAG00000037616	RAB11B	100	97.706	Aotus_nancymaae
ENSPNAG00000006431	-	93	88.177	ENSACLG00000018852	-	92	88.177	Astatotilapia_calliptera
ENSPNAG00000006431	-	100	94.037	ENSACLG00000005420	rab11ba	100	94.037	Astatotilapia_calliptera
ENSPNAG00000006431	-	99	79.630	WBGene00004274	rab-11.1	99	79.630	Caenorhabditis_elegans
ENSPNAG00000006431	-	100	97.706	ENSCJAG00000010778	RAB11B	100	97.706	Callithrix_jacchus
ENSPNAG00000006431	-	100	97.706	ENSCAFG00000032060	RAB11B	100	97.706	Canis_familiaris
ENSPNAG00000006431	-	100	97.706	ENSCAFG00020022184	RAB11B	100	97.706	Canis_lupus_dingo
ENSPNAG00000006431	-	100	97.706	ENSTSYG00000014758	RAB11B	100	97.706	Carlito_syrichta
ENSPNAG00000006431	-	100	97.248	ENSCPOG00000030154	RAB11B	100	97.248	Cavia_porcellus
ENSPNAG00000006431	-	100	97.706	ENSCCAG00000031042	RAB11B	100	97.706	Cebus_capucinus
ENSPNAG00000006431	-	100	97.706	ENSCLAG00000003207	RAB11B	100	97.706	Chinchilla_lanigera
ENSPNAG00000006431	-	100	97.706	ENSCSAG00000008024	RAB11B	100	97.706	Chlorocebus_sabaeus
ENSPNAG00000006431	-	100	83.486	ENSCHOG00000013525	RAB11B	100	83.486	Choloepus_hoffmanni
ENSPNAG00000006431	-	100	83.945	ENSCING00000009526	-	100	83.945	Ciona_intestinalis
ENSPNAG00000006431	-	100	97.706	ENSCANG00000040517	RAB11B	100	97.706	Colobus_angolensis_palliatus
ENSPNAG00000006431	-	100	97.706	ENSCGRG00001013827	Rab11b	100	97.706	Cricetulus_griseus_chok1gshd
ENSPNAG00000006431	-	100	97.706	ENSCGRG00000010967	Rab11b	100	97.706	Cricetulus_griseus_crigri
ENSPNAG00000006431	-	100	94.954	ENSCSEG00000007121	rab11ba	84	94.954	Cynoglossus_semilaevis
ENSPNAG00000006431	-	100	96.330	ENSDARG00000041878	rab11ba	100	96.585	Danio_rerio
ENSPNAG00000006431	-	100	97.706	ENSDNOG00000014618	RAB11B	97	97.706	Dasypus_novemcinctus
ENSPNAG00000006431	-	100	95.872	ENSDNOG00000004134	-	100	95.872	Dasypus_novemcinctus
ENSPNAG00000006431	-	100	96.789	ENSDORG00000006304	Rab11b	100	96.789	Dipodomys_ordii
ENSPNAG00000006431	-	100	92.661	ENSEBUG00000011775	rab11ba	99	93.171	Eptatretus_burgeri
ENSPNAG00000006431	-	100	81.651	ENSEBUG00000015447	-	100	81.651	Eptatretus_burgeri
ENSPNAG00000006431	-	66	97.902	ENSEEUG00000009165	-	100	97.902	Erinaceus_europaeus
ENSPNAG00000006431	-	89	91.237	ENSELUG00000019240	-	99	91.237	Esox_lucius
ENSPNAG00000006431	-	100	97.248	ENSFCAG00000015216	RAB11B	100	97.248	Felis_catus
ENSPNAG00000006431	-	100	97.248	ENSFDAG00000019872	RAB11B	100	97.248	Fukomys_damarensis
ENSPNAG00000006431	-	100	94.495	ENSFHEG00000022642	rab11ba	100	94.495	Fundulus_heteroclitus
ENSPNAG00000006431	-	100	93.578	ENSGMOG00000007390	rab11ba	99	93.578	Gadus_morhua
ENSPNAG00000006431	-	100	94.954	ENSGAFG00000005679	rab11ba	100	94.954	Gambusia_affinis
ENSPNAG00000006431	-	100	98.624	ENSGAGG00000012557	-	100	98.624	Gopherus_agassizii
ENSPNAG00000006431	-	100	97.706	ENSHGLG00000014984	RAB11B	100	97.706	Heterocephalus_glaber_female
ENSPNAG00000006431	-	100	97.248	ENSHGLG00100003638	RAB11B	100	97.248	Heterocephalus_glaber_male
ENSPNAG00000006431	-	100	97.706	ENSSTOG00000031571	RAB11B	100	97.706	Ictidomys_tridecemlineatus
ENSPNAG00000006431	-	100	97.706	ENSJJAG00000018891	Rab11b	100	97.706	Jaculus_jaculus
ENSPNAG00000006431	-	100	95.413	ENSKMAG00000006082	-	100	95.413	Kryptolebias_marmoratus
ENSPNAG00000006431	-	100	95.413	ENSLBEG00000006087	rab11ba	100	95.413	Labrus_bergylta
ENSPNAG00000006431	-	78	98.824	ENSLACG00000016974	RAB11B	99	98.824	Latimeria_chalumnae
ENSPNAG00000006431	-	100	97.706	ENSLAFG00000013598	RAB11B	100	97.706	Loxodonta_africana
ENSPNAG00000006431	-	100	97.706	ENSMNEG00000039759	-	100	97.706	Macaca_nemestrina
ENSPNAG00000006431	-	100	94.954	ENSMAMG00000018556	rab11ba	100	94.954	Mastacembelus_armatus
ENSPNAG00000006431	-	93	88.177	ENSMZEG00005019251	-	92	88.177	Maylandia_zebra
ENSPNAG00000006431	-	100	94.037	ENSMZEG00005010947	rab11ba	100	94.037	Maylandia_zebra
ENSPNAG00000006431	-	100	97.248	ENSMAUG00000021579	Rab11b	100	97.248	Mesocricetus_auratus
ENSPNAG00000006431	-	100	97.248	ENSMOCG00000012667	Rab11b	100	97.248	Microtus_ochrogaster
ENSPNAG00000006431	-	100	91.743	ENSMALG00000021949	rab11ba	100	91.743	Monopterus_albus
ENSPNAG00000006431	-	100	97.706	MGP_CAROLIEiJ_G0021415	Rab11b	100	97.706	Mus_caroli
ENSPNAG00000006431	-	100	96.789	ENSMUSG00000077450	Rab11b	100	96.789	Mus_musculus
ENSPNAG00000006431	-	100	97.706	MGP_PahariEiJ_G0020420	Rab11b	100	97.706	Mus_pahari
ENSPNAG00000006431	-	100	97.706	MGP_SPRETEiJ_G0022327	Rab11b	100	97.706	Mus_spretus
ENSPNAG00000006431	-	100	97.248	ENSMPUG00000007263	RAB11B	100	97.248	Mustela_putorius_furo
ENSPNAG00000006431	-	100	93.213	ENSMLUG00000002308	-	100	93.213	Myotis_lucifugus
ENSPNAG00000006431	-	100	97.706	ENSNGAG00000015757	Rab11b	100	97.706	Nannospalax_galili
ENSPNAG00000006431	-	100	94.495	ENSNBRG00000023898	rab11ba	84	94.495	Neolamprologus_brichardi
ENSPNAG00000006431	-	100	97.706	ENSNLEG00000001733	RAB11B	100	97.706	Nomascus_leucogenys
ENSPNAG00000006431	-	100	97.706	ENSODEG00000011371	RAB11B	100	97.706	Octodon_degus
ENSPNAG00000006431	-	100	94.954	ENSONIG00000002535	rab11ba	100	94.954	Oreochromis_niloticus
ENSPNAG00000006431	-	74	97.516	ENSOCUG00000028208	RAB11B	64	97.516	Oryctolagus_cuniculus
ENSPNAG00000006431	-	99	95.392	ENSORLG00000015307	rab11ba	99	95.392	Oryzias_latipes
ENSPNAG00000006431	-	99	95.392	ENSORLG00020020816	rab11ba	99	95.392	Oryzias_latipes_hni
ENSPNAG00000006431	-	99	95.833	ENSORLG00015016946	rab11ba	81	95.833	Oryzias_latipes_hsok
ENSPNAG00000006431	-	99	95.392	ENSOMEG00000002581	rab11ba	99	95.392	Oryzias_melastigma
ENSPNAG00000006431	-	100	97.706	ENSOGAG00000003227	RAB11B	99	97.706	Otolemur_garnettii
ENSPNAG00000006431	-	100	97.706	ENSOARG00000003801	RAB11B	97	97.706	Ovis_aries
ENSPNAG00000006431	-	83	93.889	ENSPPRG00000010160	RAB11B	88	93.889	Panthera_pardus
ENSPNAG00000006431	-	100	97.706	ENSPEMG00000014536	Rab11b	100	97.706	Peromyscus_maniculatus_bairdii
ENSPNAG00000006431	-	94	80.476	ENSPMAG00000009335	-	100	80.476	Petromyzon_marinus
ENSPNAG00000006431	-	100	95.413	ENSPFOG00000006159	rab11ba	100	95.413	Poecilia_formosa
ENSPNAG00000006431	-	100	95.413	ENSPLAG00000014243	rab11ba	100	95.413	Poecilia_latipinna
ENSPNAG00000006431	-	100	95.413	ENSPMEG00000007917	rab11ba	75	95.413	Poecilia_mexicana
ENSPNAG00000006431	-	100	95.413	ENSPREG00000006357	rab11ba	78	95.413	Poecilia_reticulata
ENSPNAG00000006431	-	100	97.706	ENSPPYG00000009504	RAB11B	100	97.706	Pongo_abelii
ENSPNAG00000006431	-	100	88.991	ENSPCAG00000016118	RAB11B	100	88.991	Procavia_capensis
ENSPNAG00000006431	-	67	95.890	ENSPCOG00000008655	-	100	95.890	Propithecus_coquereli
ENSPNAG00000006431	-	100	97.706	ENSPCOG00000028053	RAB11B	100	97.706	Propithecus_coquereli
ENSPNAG00000006431	-	100	97.706	ENSPVAG00000009645	RAB11B	100	97.706	Pteropus_vampyrus
ENSPNAG00000006431	-	98	75.463	ENSPNYG00000023810	-	95	75.463	Pundamilia_nyererei
ENSPNAG00000006431	-	100	94.037	ENSPNYG00000019644	rab11ba	100	94.037	Pundamilia_nyererei
ENSPNAG00000006431	-	100	97.706	ENSRNOG00000007648	Rab11b	100	97.706	Rattus_norvegicus
ENSPNAG00000006431	-	100	97.706	ENSSBOG00000035094	RAB11B	100	97.706	Saimiri_boliviensis_boliviensis
ENSPNAG00000006431	-	100	95.413	ENSSDUG00000002965	rab11ba	100	95.413	Seriola_dumerili
ENSPNAG00000006431	-	100	95.413	ENSSLDG00000005221	rab11ba	100	95.413	Seriola_lalandi_dorsalis
ENSPNAG00000006431	-	100	94.495	ENSSPAG00000017313	rab11ba	100	94.495	Stegastes_partitus
ENSPNAG00000006431	-	100	97.706	ENSSSCG00000013600	RAB11B	100	97.706	Sus_scrofa
ENSPNAG00000006431	-	59	99.225	ENSTBEG00000014750	-	100	99.225	Tupaia_belangeri
ENSPNAG00000006431	-	100	97.706	ENSTTRG00000009758	RAB11B	100	97.706	Tursiops_truncatus
ENSPNAG00000006431	-	94	79.024	ENSUMAG00000014594	RAB11B	97	79.024	Ursus_maritimus
ENSPNAG00000006431	-	100	97.706	ENSVVUG00000025210	RAB11B	100	97.706	Vulpes_vulpes
ENSPNAG00000006431	-	100	94.495	ENSXETG00000021890	rab11b.2	99	94.495	Xenopus_tropicalis
ENSPNAG00000006431	-	61	96.992	ENSXCOG00000009194	-	98	96.992	Xiphophorus_couchianus
ENSPNAG00000006431	-	100	94.954	ENSXMAG00000013416	rab11ba	100	94.954	Xiphophorus_maculatus