EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000007619 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zinc finger matrin-type protein 4-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 56704 bases
Position: chrKV575296.1:3285424-3342127
Accession: 108443470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000000606	zf-met	PF12874.7	3.4e-26	1	4
ENSPNAP00000000606	zf-met	PF12874.7	3.4e-26	2	4
ENSPNAP00000000606	zf-met	PF12874.7	3.4e-26	3	4
ENSPNAP00000000606	zf-met	PF12874.7	3.4e-26	4	4
ENSPNAP00000000606	zf-C2H2_jaz	PF12171.8	5.7e-21	1	2
ENSPNAP00000000606	zf-C2H2_jaz	PF12171.8	5.7e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000013561	-	705	XM_017724181	ENSPNAP00000000606	234 (aa)	XP_017579670	-

Gene Model

Click here to download ENSPNAG00000007619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000007619's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000007619	zgc:171482	97	58.874	ENSPNAG00000023764	zmat4b	98	57.642
ENSPNAG00000007619	zgc:171482	95	45.050	ENSPNAG00000015934	znf346	74	45.815
ENSPNAG00000007619	zgc:171482	97	63.319	ENSPNAG00000009604	zmat4a	85	63.319

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000007619	zgc:171482	97	84.279	ENSAPOG00000019970	zgc:171482	99	82.096	Acanthochromis_polyacanthus
ENSPNAG00000007619	zgc:171482	79	93.162	ENSACIG00000021512	zgc:171482	86	93.913	Amphilophus_citrinellus
ENSPNAG00000007619	zgc:171482	79	93.162	ENSAOCG00000000751	zgc:171482	85	93.913	Amphiprion_ocellaris
ENSPNAG00000007619	zgc:171482	79	93.162	ENSAPEG00000014154	zgc:171482	83	93.913	Amphiprion_percula
ENSPNAG00000007619	zgc:171482	97	83.043	ENSATEG00000001371	zgc:171482	99	82.969	Anabas_testudineus
ENSPNAG00000007619	zgc:171482	79	89.600	ENSACLG00000010511	zgc:171482	80	93.913	Astatotilapia_calliptera
ENSPNAG00000007619	zgc:171482	97	88.646	ENSAMXG00000002299	zgc:171482	92	96.721	Astyanax_mexicanus
ENSPNAG00000007619	zgc:171482	97	89.744	ENSCSEG00000006509	zgc:171482	99	91.304	Cynoglossus_semilaevis
ENSPNAG00000007619	zgc:171482	97	83.550	ENSCVAG00000013606	zgc:171482	99	82.609	Cyprinodon_variegatus
ENSPNAG00000007619	zgc:171482	100	89.407	ENSDARG00000074415	zgc:171482	99	97.674	Danio_rerio
ENSPNAG00000007619	zgc:171482	79	90.083	ENSELUG00000021817	zgc:171482	80	96.396	Esox_lucius
ENSPNAG00000007619	zgc:171482	80	64.362	ENSELUG00000017517	-	60	85.556	Esox_lucius
ENSPNAG00000007619	zgc:171482	52	67.883	ENSELUG00000021794	-	59	87.912	Esox_lucius
ENSPNAG00000007619	zgc:171482	97	81.223	ENSFHEG00000002233	zgc:171482	99	81.223	Fundulus_heteroclitus
ENSPNAG00000007619	zgc:171482	97	83.406	ENSGMOG00000010508	zgc:171482	99	82.096	Gadus_morhua
ENSPNAG00000007619	zgc:171482	97	93.162	ENSGAFG00000009398	zgc:171482	99	93.913	Gambusia_affinis
ENSPNAG00000007619	zgc:171482	97	84.681	ENSGACG00000007680	zgc:171482	99	83.550	Gasterosteus_aculeatus
ENSPNAG00000007619	zgc:171482	79	89.600	ENSHBUG00000023289	zgc:171482	86	93.913	Haplochromis_burtoni
ENSPNAG00000007619	zgc:171482	79	85.600	ENSHCOG00000018086	zgc:171482	86	90.435	Hippocampus_comes
ENSPNAG00000007619	zgc:171482	50	86.555	ENSIPUG00000000356	-	66	92.708	Ictalurus_punctatus
ENSPNAG00000007619	zgc:171482	79	96.639	ENSIPUG00000000361	zgc:171482	86	96.639	Ictalurus_punctatus
ENSPNAG00000007619	zgc:171482	97	80.000	ENSKMAG00000005077	zgc:171482	85	79.913	Kryptolebias_marmoratus
ENSPNAG00000007619	zgc:171482	79	88.000	ENSLBEG00000023823	zgc:171482	82	93.043	Labrus_bergylta
ENSPNAG00000007619	zgc:171482	97	85.590	ENSLOCG00000008863	zgc:171482	96	83.843	Lepisosteus_oculatus
ENSPNAG00000007619	zgc:171482	79	88.800	ENSMAMG00000001031	zgc:171482	72	93.043	Mastacembelus_armatus
ENSPNAG00000007619	zgc:171482	97	83.043	ENSMZEG00005027721	zgc:171482	99	82.174	Maylandia_zebra
ENSPNAG00000007619	zgc:171482	79	90.400	ENSMMOG00000010523	zgc:171482	88	94.783	Mola_mola
ENSPNAG00000007619	zgc:171482	97	85.652	ENSMALG00000017883	zgc:171482	99	83.117	Monopterus_albus
ENSPNAG00000007619	zgc:171482	79	93.860	ENSNBRG00000021035	zgc:171482	85	93.860	Neolamprologus_brichardi
ENSPNAG00000007619	zgc:171482	97	86.522	ENSONIG00000018365	zgc:171482	98	84.783	Oreochromis_niloticus
ENSPNAG00000007619	zgc:171482	97	84.348	ENSORLG00000007607	zgc:171482	99	84.348	Oryzias_latipes
ENSPNAG00000007619	zgc:171482	97	82.403	ENSORLG00020003563	zgc:171482	99	82.609	Oryzias_latipes_hni
ENSPNAG00000007619	zgc:171482	97	84.348	ENSORLG00015008552	zgc:171482	99	84.348	Oryzias_latipes_hsok
ENSPNAG00000007619	zgc:171482	79	92.437	ENSOMEG00000003526	zgc:171482	81	93.913	Oryzias_melastigma
ENSPNAG00000007619	zgc:171482	79	93.277	ENSPKIG00000015911	-	80	94.783	Paramormyrops_kingsleyae
ENSPNAG00000007619	zgc:171482	79	89.091	ENSPKIG00000016244	zgc:171482	82	86.957	Paramormyrops_kingsleyae
ENSPNAG00000007619	zgc:171482	97	85.294	ENSPMGG00000020230	zgc:171482	100	80.672	Periophthalmus_magnuspinnatus
ENSPNAG00000007619	zgc:171482	100	86.179	ENSPFOG00000001974	zgc:171482	99	81.301	Poecilia_formosa
ENSPNAG00000007619	zgc:171482	97	83.117	ENSPLAG00000003327	zgc:171482	99	83.043	Poecilia_latipinna
ENSPNAG00000007619	zgc:171482	100	89.600	ENSPMEG00000004988	zgc:171482	99	78.788	Poecilia_mexicana
ENSPNAG00000007619	zgc:171482	79	89.600	ENSPREG00000019241	zgc:171482	83	93.913	Poecilia_reticulata
ENSPNAG00000007619	zgc:171482	79	89.600	ENSPNYG00000007773	zgc:171482	80	93.913	Pundamilia_nyererei
ENSPNAG00000007619	zgc:171482	79	86.441	ENSSFOG00015016149	zgc:171482	91	87.719	Scleropages_formosus
ENSPNAG00000007619	zgc:171482	79	84.058	ENSSFOG00015021238	zgc:171482	78	91.304	Scleropages_formosus
ENSPNAG00000007619	zgc:171482	79	85.385	ENSSMAG00000002715	zgc:171482	74	93.043	Scophthalmus_maximus
ENSPNAG00000007619	zgc:171482	79	87.023	ENSSDUG00000008773	zgc:171482	81	93.913	Seriola_dumerili
ENSPNAG00000007619	zgc:171482	79	87.023	ENSSLDG00000019510	zgc:171482	81	93.913	Seriola_lalandi_dorsalis
ENSPNAG00000007619	zgc:171482	79	93.162	ENSSPAG00000013724	zgc:171482	91	93.913	Stegastes_partitus
ENSPNAG00000007619	zgc:171482	84	88.525	ENSTRUG00000005705	zgc:171482	68	93.043	Takifugu_rubripes
ENSPNAG00000007619	zgc:171482	97	73.913	ENSTNIG00000008679	zgc:171482	99	71.429	Tetraodon_nigroviridis
ENSPNAG00000007619	zgc:171482	82	58.333	ENSXETG00000013525	zmat4	90	58.333	Xenopus_tropicalis
ENSPNAG00000007619	zgc:171482	97	83.761	ENSXMAG00000002641	zgc:171482	99	84.348	Xiphophorus_maculatus