EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000007658 (Gene tree)
Gene ID: 108443427
Gene Symbol: rrp12
Alias: im:7142677|im:7149218|zgc:111822
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 18683 bases
Position: chrKV575296.1:3156599-3175281
Accession: 108443427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000000660	NUC173	PF08161.12	3.4e-71	1	1
ENSPNAP00000023113	NUC173	PF08161.12	4.8e-71	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000013463	-	6290	XM_017724095	ENSPNAP00000023113	1282 (aa)	XP_017579584	UPI00081469AB
ENSPNAT00000013479	-	3672	-	ENSPNAP00000000660	1223 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000007658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000007658's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000007658	rrp12	97	68.966	ENSG00000052749	RRP12	100	77.841	Homo_sapiens
ENSPNAG00000007658	rrp12	99	74.359	ENSAPOG00000013355	rrp12	93	87.755	Acanthochromis_polyacanthus
ENSPNAG00000007658	rrp12	99	62.231	ENSAMEG00000000134	RRP12	99	61.923	Ailuropoda_melanoleuca
ENSPNAG00000007658	rrp12	99	75.959	ENSACIG00000022673	rrp12	93	85.714	Amphilophus_citrinellus
ENSPNAG00000007658	rrp12	99	76.719	ENSAOCG00000016149	rrp12	93	87.755	Amphiprion_ocellaris
ENSPNAG00000007658	rrp12	99	75.935	ENSAPEG00000016023	rrp12	93	87.755	Amphiprion_percula
ENSPNAG00000007658	rrp12	99	75.039	ENSATEG00000022627	rrp12	100	75.077	Anabas_testudineus
ENSPNAG00000007658	rrp12	96	58.193	ENSAPLG00000014387	RRP12	99	58.134	Anas_platyrhynchos
ENSPNAG00000007658	rrp12	99	59.598	ENSACAG00000002175	RRP12	93	70.455	Anolis_carolinensis
ENSPNAG00000007658	rrp12	92	75.000	ENSANAG00000037485	RRP12	99	68.391	Aotus_nancymaae
ENSPNAG00000007658	rrp12	99	75.430	ENSACLG00000007354	rrp12	93	87.755	Astatotilapia_calliptera
ENSPNAG00000007658	rrp12	100	86.148	ENSAMXG00000012852	rrp12	100	86.148	Astyanax_mexicanus
ENSPNAG00000007658	rrp12	97	66.477	ENSBTAG00000002191	RRP12	99	68.182	Bos_taurus
ENSPNAG00000007658	rrp12	85	59.799	ENSCJAG00000016549	-	99	59.526	Callithrix_jacchus
ENSPNAG00000007658	rrp12	99	62.366	ENSCAFG00000009043	RRP12	99	61.905	Canis_familiaris
ENSPNAG00000007658	rrp12	99	62.366	ENSCAFG00020005991	RRP12	99	61.905	Canis_lupus_dingo
ENSPNAG00000007658	rrp12	99	59.373	ENSCHIG00000011876	RRP12	99	58.761	Capra_hircus
ENSPNAG00000007658	rrp12	53	52.814	ENSTSYG00000030210	-	99	52.594	Carlito_syrichta
ENSPNAG00000007658	rrp12	96	56.240	ENSCAPG00000008991	RRP12	98	55.901	Cavia_aperea
ENSPNAG00000007658	rrp12	100	61.776	ENSCPOG00000004215	RRP12	100	61.622	Cavia_porcellus
ENSPNAG00000007658	rrp12	70	56.167	ENSCCAG00000033123	-	82	55.396	Cebus_capucinus
ENSPNAG00000007658	rrp12	79	65.976	ENSCCAG00000024088	RRP12	99	67.939	Cebus_capucinus
ENSPNAG00000007658	rrp12	99	57.713	ENSCATG00000045310	RRP12	99	57.781	Cercocebus_atys
ENSPNAG00000007658	rrp12	100	61.188	ENSCLAG00000003753	RRP12	100	60.880	Chinchilla_lanigera
ENSPNAG00000007658	rrp12	88	59.600	ENSCSAG00000005877	RRP12	99	59.808	Chlorocebus_sabaeus
ENSPNAG00000007658	rrp12	59	70.715	ENSCHOG00000003095	-	56	71.215	Choloepus_hoffmanni
ENSPNAG00000007658	rrp12	94	62.086	ENSCPBG00000011935	RRP12	97	62.015	Chrysemys_picta_bellii
ENSPNAG00000007658	rrp12	63	40.119	ENSCSAVG00000006059	-	99	39.333	Ciona_savignyi
ENSPNAG00000007658	rrp12	92	73.684	ENSCANG00000031653	RRP12	99	68.391	Colobus_angolensis_palliatus
ENSPNAG00000007658	rrp12	90	61.677	ENSCGRG00001004338	Rrp12	99	61.591	Cricetulus_griseus_chok1gshd
ENSPNAG00000007658	rrp12	99	61.223	ENSCGRG00000011965	Rrp12	99	61.146	Cricetulus_griseus_crigri
ENSPNAG00000007658	rrp12	99	74.068	ENSCSEG00000007799	rrp12	99	74.166	Cynoglossus_semilaevis
ENSPNAG00000007658	rrp12	99	76.388	ENSCVAG00000003418	rrp12	93	89.796	Cyprinodon_variegatus
ENSPNAG00000007658	rrp12	100	79.005	ENSDARG00000022410	rrp12	100	79.082	Danio_rerio
ENSPNAG00000007658	rrp12	99	61.313	ENSDNOG00000005120	RRP12	99	61.094	Dasypus_novemcinctus
ENSPNAG00000007658	rrp12	99	61.681	ENSDORG00000009199	Rrp12	99	61.828	Dipodomys_ordii
ENSPNAG00000007658	rrp12	92	64.286	ENSETEG00000002455	RRP12	93	65.060	Echinops_telfairi
ENSPNAG00000007658	rrp12	91	68.750	ENSEBUG00000006555	rrp12	98	70.213	Eptatretus_burgeri
ENSPNAG00000007658	rrp12	99	62.066	ENSEASG00005008693	RRP12	99	61.989	Equus_asinus_asinus
ENSPNAG00000007658	rrp12	94	61.799	ENSECAG00000010892	RRP12	99	61.716	Equus_caballus
ENSPNAG00000007658	rrp12	64	59.118	ENSEEUG00000005447	-	63	59.118	Erinaceus_europaeus
ENSPNAG00000007658	rrp12	99	74.186	ENSELUG00000010510	rrp12	99	73.957	Esox_lucius
ENSPNAG00000007658	rrp12	92	76.316	ENSFCAG00000028639	RRP12	99	69.540	Felis_catus
ENSPNAG00000007658	rrp12	94	61.424	ENSFALG00000008458	RRP12	99	60.895	Ficedula_albicollis
ENSPNAG00000007658	rrp12	99	61.236	ENSFDAG00000019108	RRP12	95	61.111	Fukomys_damarensis
ENSPNAG00000007658	rrp12	99	70.000	ENSFHEG00000004148	rrp12	100	69.225	Fundulus_heteroclitus
ENSPNAG00000007658	rrp12	99	66.098	ENSGMOG00000004188	rrp12	99	65.998	Gadus_morhua
ENSPNAG00000007658	rrp12	99	61.938	ENSGALG00000041331	RRP12	95	63.463	Gallus_gallus
ENSPNAG00000007658	rrp12	99	76.094	ENSGAFG00000009038	rrp12	94	87.273	Gambusia_affinis
ENSPNAG00000007658	rrp12	99	73.865	ENSGACG00000007175	rrp12	93	85.714	Gasterosteus_aculeatus
ENSPNAG00000007658	rrp12	67	66.205	ENSGAGG00000019169	RRP12	99	63.485	Gopherus_agassizii
ENSPNAG00000007658	rrp12	97	68.966	ENSGGOG00000014850	RRP12	99	68.966	Gorilla_gorilla
ENSPNAG00000007658	rrp12	99	75.587	ENSHBUG00000023527	rrp12	93	87.755	Haplochromis_burtoni
ENSPNAG00000007658	rrp12	99	61.728	ENSHGLG00000016772	RRP12	99	61.651	Heterocephalus_glaber_female
ENSPNAG00000007658	rrp12	99	61.728	ENSHGLG00100015110	RRP12	99	61.651	Heterocephalus_glaber_male
ENSPNAG00000007658	rrp12	100	72.006	ENSHCOG00000019519	rrp12	100	71.928	Hippocampus_comes
ENSPNAG00000007658	rrp12	100	83.061	ENSIPUG00000000311	RRP12	100	83.294	Ictalurus_punctatus
ENSPNAG00000007658	rrp12	99	62.500	ENSSTOG00000006515	RRP12	99	62.500	Ictidomys_tridecemlineatus
ENSPNAG00000007658	rrp12	96	61.089	ENSJJAG00000000110	Rrp12	99	60.849	Jaculus_jaculus
ENSPNAG00000007658	rrp12	99	76.153	ENSKMAG00000020621	rrp12	100	76.338	Kryptolebias_marmoratus
ENSPNAG00000007658	rrp12	100	71.484	ENSLBEG00000015335	rrp12	100	71.572	Labrus_bergylta
ENSPNAG00000007658	rrp12	72	66.667	ENSLACG00000016633	RRP12	81	66.667	Latimeria_chalumnae
ENSPNAG00000007658	rrp12	100	70.209	ENSLOCG00000003846	rrp12	93	83.673	Lepisosteus_oculatus
ENSPNAG00000007658	rrp12	99	61.952	ENSLAFG00000015965	RRP12	99	61.905	Loxodonta_africana
ENSPNAG00000007658	rrp12	92	73.026	ENSMFAG00000041558	RRP12	99	67.816	Macaca_fascicularis
ENSPNAG00000007658	rrp12	92	73.026	ENSMMUG00000019634	RRP12	99	67.816	Macaca_mulatta
ENSPNAG00000007658	rrp12	92	73.026	ENSMNEG00000036759	RRP12	99	67.816	Macaca_nemestrina
ENSPNAG00000007658	rrp12	92	73.684	ENSMLEG00000041317	RRP12	99	57.757	Mandrillus_leucophaeus
ENSPNAG00000007658	rrp12	99	73.688	ENSMAMG00000002964	rrp12	99	75.622	Mastacembelus_armatus
ENSPNAG00000007658	rrp12	99	75.587	ENSMZEG00005003241	rrp12	93	87.755	Maylandia_zebra
ENSPNAG00000007658	rrp12	99	60.372	ENSMGAG00000009829	RRP12	99	60.139	Meleagris_gallopavo
ENSPNAG00000007658	rrp12	99	60.294	ENSMAUG00000020743	Rrp12	99	60.062	Mesocricetus_auratus
ENSPNAG00000007658	rrp12	97	70.857	ENSMICG00000007624	RRP12	99	70.857	Microcebus_murinus
ENSPNAG00000007658	rrp12	100	62.327	ENSMOCG00000006753	Rrp12	100	62.018	Microtus_ochrogaster
ENSPNAG00000007658	rrp12	100	73.623	ENSMMOG00000010708	rrp12	100	73.545	Mola_mola
ENSPNAG00000007658	rrp12	99	62.587	ENSMODG00000004315	RRP12	99	62.432	Monodelphis_domestica
ENSPNAG00000007658	rrp12	99	70.492	ENSMALG00000016560	rrp12	99	74.385	Monopterus_albus
ENSPNAG00000007658	rrp12	99	61.803	MGP_CAROLIEiJ_G0022957	Rrp12	99	61.115	Mus_caroli
ENSPNAG00000007658	rrp12	99	62.298	ENSMUSG00000035049	Rrp12	99	61.758	Mus_musculus
ENSPNAG00000007658	rrp12	100	62.404	MGP_PahariEiJ_G0014447	Rrp12	100	61.864	Mus_pahari
ENSPNAG00000007658	rrp12	99	62.452	MGP_SPRETEiJ_G0023878	Rrp12	99	61.912	Mus_spretus
ENSPNAG00000007658	rrp12	99	62.106	ENSMPUG00000017046	RRP12	99	61.740	Mustela_putorius_furo
ENSPNAG00000007658	rrp12	99	61.598	ENSMLUG00000017160	RRP12	99	61.704	Myotis_lucifugus
ENSPNAG00000007658	rrp12	99	62.490	ENSNGAG00000024144	Rrp12	99	62.394	Nannospalax_galili
ENSPNAG00000007658	rrp12	99	74.628	ENSNBRG00000009987	rrp12	100	74.650	Neolamprologus_brichardi
ENSPNAG00000007658	rrp12	97	68.966	ENSNLEG00000013762	RRP12	99	68.966	Nomascus_leucogenys
ENSPNAG00000007658	rrp12	100	55.978	ENSMEUG00000003185	RRP12	100	55.978	Notamacropus_eugenii
ENSPNAG00000007658	rrp12	94	67.221	ENSOPRG00000005001	RRP12	94	67.221	Ochotona_princeps
ENSPNAG00000007658	rrp12	100	61.491	ENSODEG00000016439	RRP12	100	60.870	Octodon_degus
ENSPNAG00000007658	rrp12	99	75.822	ENSONIG00000009528	rrp12	93	87.755	Oreochromis_niloticus
ENSPNAG00000007658	rrp12	100	58.109	ENSOANG00000006560	RRP12	100	57.879	Ornithorhynchus_anatinus
ENSPNAG00000007658	rrp12	99	61.890	ENSOCUG00000005662	RRP12	99	61.890	Oryctolagus_cuniculus
ENSPNAG00000007658	rrp12	99	74.491	ENSORLG00000008688	rrp12	99	74.640	Oryzias_latipes
ENSPNAG00000007658	rrp12	97	74.900	ENSORLG00020002355	rrp12	99	74.821	Oryzias_latipes_hni
ENSPNAG00000007658	rrp12	99	74.883	ENSORLG00015006709	rrp12	99	74.825	Oryzias_latipes_hsok
ENSPNAG00000007658	rrp12	97	75.458	ENSOMEG00000002609	rrp12	99	75.299	Oryzias_melastigma
ENSPNAG00000007658	rrp12	99	62.106	ENSOGAG00000001626	RRP12	99	61.875	Otolemur_garnettii
ENSPNAG00000007658	rrp12	99	60.492	ENSOARG00000009681	RRP12	99	60.031	Ovis_aries
ENSPNAG00000007658	rrp12	97	68.966	ENSPPAG00000043885	RRP12	99	68.966	Pan_paniscus
ENSPNAG00000007658	rrp12	92	75.658	ENSPPRG00000002029	RRP12	99	68.966	Panthera_pardus
ENSPNAG00000007658	rrp12	92	76.316	ENSPTIG00000004428	RRP12	99	69.540	Panthera_tigris_altaica
ENSPNAG00000007658	rrp12	97	68.966	ENSPTRG00000002806	RRP12	99	68.966	Pan_troglodytes
ENSPNAG00000007658	rrp12	92	73.684	ENSPANG00000021360	RRP12	99	68.391	Papio_anubis
ENSPNAG00000007658	rrp12	100	73.338	ENSPKIG00000016516	rrp12	99	73.086	Paramormyrops_kingsleyae
ENSPNAG00000007658	rrp12	99	73.396	ENSPMGG00000020217	rrp12	100	73.214	Periophthalmus_magnuspinnatus
ENSPNAG00000007658	rrp12	100	62.510	ENSPEMG00000008437	Rrp12	99	62.048	Peromyscus_maniculatus_bairdii
ENSPNAG00000007658	rrp12	99	45.749	ENSPMAG00000007493	rrp12	92	62.500	Petromyzon_marinus
ENSPNAG00000007658	rrp12	96	72.669	ENSPCIG00000002157	RRP12	100	62.016	Phascolarctos_cinereus
ENSPNAG00000007658	rrp12	99	75.938	ENSPFOG00000014975	rrp12	94	85.455	Poecilia_formosa
ENSPNAG00000007658	rrp12	99	75.938	ENSPLAG00000009840	rrp12	94	85.455	Poecilia_latipinna
ENSPNAG00000007658	rrp12	99	75.938	ENSPMEG00000021871	rrp12	94	85.455	Poecilia_mexicana
ENSPNAG00000007658	rrp12	99	73.754	ENSPREG00000020950	rrp12	100	73.570	Poecilia_reticulata
ENSPNAG00000007658	rrp12	99	61.201	ENSPPYG00000002528	RRP12	99	61.047	Pongo_abelii
ENSPNAG00000007658	rrp12	94	79.096	ENSPCAG00000008967	RRP12	94	79.096	Procavia_capensis
ENSPNAG00000007658	rrp12	92	77.632	ENSPCOG00000014009	RRP12	99	70.690	Propithecus_coquereli
ENSPNAG00000007658	rrp12	99	59.322	ENSPVAG00000003370	RRP12	100	59.091	Pteropus_vampyrus
ENSPNAG00000007658	rrp12	99	75.822	ENSPNYG00000009451	rrp12	93	87.755	Pundamilia_nyererei
ENSPNAG00000007658	rrp12	99	62.037	ENSRNOG00000048495	Rrp12	99	61.728	Rattus_norvegicus
ENSPNAG00000007658	rrp12	92	73.684	ENSRBIG00000021296	RRP12	99	68.391	Rhinopithecus_bieti
ENSPNAG00000007658	rrp12	92	73.684	ENSRROG00000032482	RRP12	99	68.391	Rhinopithecus_roxellana
ENSPNAG00000007658	rrp12	92	73.684	ENSSBOG00000030992	RRP12	99	67.241	Saimiri_boliviensis_boliviensis
ENSPNAG00000007658	rrp12	99	62.374	ENSSHAG00000018275	RRP12	99	62.374	Sarcophilus_harrisii
ENSPNAG00000007658	rrp12	99	75.875	ENSSFOG00015016400	rrp12	99	75.409	Scleropages_formosus
ENSPNAG00000007658	rrp12	99	74.804	ENSSMAG00000004047	rrp12	100	75.252	Scophthalmus_maximus
ENSPNAG00000007658	rrp12	99	75.781	ENSSDUG00000022871	rrp12	100	75.814	Seriola_dumerili
ENSPNAG00000007658	rrp12	99	75.547	ENSSLDG00000003038	rrp12	100	75.581	Seriola_lalandi_dorsalis
ENSPNAG00000007658	rrp12	100	60.648	ENSSPUG00000012221	RRP12	100	60.802	Sphenodon_punctatus
ENSPNAG00000007658	rrp12	99	76.094	ENSSPAG00000002261	rrp12	93	87.755	Stegastes_partitus
ENSPNAG00000007658	rrp12	100	61.556	ENSSSCG00000010514	RRP12	100	61.248	Sus_scrofa
ENSPNAG00000007658	rrp12	89	58.566	ENSTGUG00000009711	RRP12	99	57.867	Taeniopygia_guttata
ENSPNAG00000007658	rrp12	100	70.171	ENSTRUG00000012017	rrp12	100	69.416	Takifugu_rubripes
ENSPNAG00000007658	rrp12	100	74.475	ENSTNIG00000016522	rrp12	94	81.818	Tetraodon_nigroviridis
ENSPNAG00000007658	rrp12	77	78.922	ENSTBEG00000004907	RRP12	80	78.922	Tupaia_belangeri
ENSPNAG00000007658	rrp12	100	59.522	ENSTTRG00000009878	RRP12	100	59.291	Tursiops_truncatus
ENSPNAG00000007658	rrp12	99	62.289	ENSUAMG00000009092	RRP12	99	62.058	Ursus_americanus
ENSPNAG00000007658	rrp12	99	60.247	ENSUMAG00000021621	RRP12	99	60.510	Ursus_maritimus
ENSPNAG00000007658	rrp12	99	62.693	ENSVVUG00000023168	RRP12	99	62.229	Vulpes_vulpes
ENSPNAG00000007658	rrp12	99	64.578	ENSXETG00000003430	rrp12	99	64.341	Xenopus_tropicalis
ENSPNAG00000007658	rrp12	98	71.074	ENSXCOG00000012082	rrp12	96	76.256	Xiphophorus_couchianus
ENSPNAG00000007658	rrp12	99	76.406	ENSXMAG00000013498	rrp12	94	85.455	Xiphophorus_maculatus