EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000007704 (Gene tree)
Gene ID: 108443258
Gene Symbol: a1cf
Alias: acf
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 14914 bases
Position: chrKV575823.1:235551-250464
Accession: 108443258
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000023181	DND1_DSRM	PF14709.7	2.6e-26	1	1
ENSPNAP00000023181	RRM_1	PF00076.22	1.8e-40	1	3
ENSPNAP00000023181	RRM_1	PF00076.22	1.8e-40	2	3
ENSPNAP00000023181	RRM_1	PF00076.22	1.8e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000013330	-	5432	XM_017723803	ENSPNAP00000023181	596 (aa)	XP_017579292	UPI00081443BA

Gene Model

Click here to download ENSPNAG00000007704's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000007704's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000007704	a1cf	90	48.803	ENSPNAG00000025312	rbm46	89	50.584
ENSPNAG00000007704	a1cf	51	52.922	ENSPNAG00000022865	hnrnpr	70	45.501
ENSPNAG00000007704	a1cf	51	51.948	ENSPNAG00000024259	syncrip	69	43.430
ENSPNAG00000007704	a1cf	90	52.321	ENSPNAG00000007940	rbm47	90	51.590

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000007704	a1cf	100	81.040	ENSG00000148584	A1CF	100	87.562	Homo_sapiens
ENSPNAG00000007704	a1cf	100	81.032	ENSAPOG00000008259	a1cf	100	80.865	Acanthochromis_polyacanthus
ENSPNAG00000007704	a1cf	100	78.808	ENSAMEG00000000523	A1CF	100	79.305	Ailuropoda_melanoleuca
ENSPNAG00000007704	a1cf	100	82.867	ENSACIG00000008632	a1cf	100	83.717	Amphilophus_citrinellus
ENSPNAG00000007704	a1cf	100	82.013	ENSAOCG00000023744	a1cf	98	87.006	Amphiprion_ocellaris
ENSPNAG00000007704	a1cf	100	80.945	ENSAPEG00000009537	a1cf	100	82.085	Amphiprion_percula
ENSPNAG00000007704	a1cf	100	84.211	ENSATEG00000013720	a1cf	100	84.375	Anabas_testudineus
ENSPNAG00000007704	a1cf	100	80.629	ENSAPLG00000002964	A1CF	100	80.629	Anas_platyrhynchos
ENSPNAG00000007704	a1cf	100	78.859	ENSACAG00000015269	A1CF	100	78.859	Anolis_carolinensis
ENSPNAG00000007704	a1cf	100	80.872	ENSANAG00000019974	A1CF	100	80.872	Aotus_nancymaae
ENSPNAG00000007704	a1cf	100	81.743	ENSACLG00000017428	a1cf	100	82.401	Astatotilapia_calliptera
ENSPNAG00000007704	a1cf	100	87.459	ENSAMXG00000018180	a1cf	100	87.954	Astyanax_mexicanus
ENSPNAG00000007704	a1cf	100	81.208	ENSBTAG00000021195	A1CF	100	81.376	Bos_taurus
ENSPNAG00000007704	a1cf	100	79.967	ENSCJAG00000005045	A1CF	100	79.967	Callithrix_jacchus
ENSPNAG00000007704	a1cf	100	78.974	ENSCAFG00000015581	A1CF	100	79.470	Canis_familiaris
ENSPNAG00000007704	a1cf	100	78.974	ENSCAFG00020026421	A1CF	98	84.615	Canis_lupus_dingo
ENSPNAG00000007704	a1cf	100	79.801	ENSCHIG00000020411	A1CF	100	79.967	Capra_hircus
ENSPNAG00000007704	a1cf	94	80.995	ENSTSYG00000001755	A1CF	100	81.528	Carlito_syrichta
ENSPNAG00000007704	a1cf	100	75.926	ENSCAPG00000017386	A1CF	100	75.617	Cavia_aperea
ENSPNAG00000007704	a1cf	100	79.305	ENSCPOG00000009807	A1CF	100	79.305	Cavia_porcellus
ENSPNAG00000007704	a1cf	100	79.801	ENSCCAG00000018168	A1CF	100	79.801	Cebus_capucinus
ENSPNAG00000007704	a1cf	100	80.369	ENSCATG00000043715	A1CF	100	80.369	Cercocebus_atys
ENSPNAG00000007704	a1cf	100	78.642	ENSCLAG00000010424	A1CF	100	78.642	Chinchilla_lanigera
ENSPNAG00000007704	a1cf	100	79.470	ENSCSAG00000007032	A1CF	100	79.470	Chlorocebus_sabaeus
ENSPNAG00000007704	a1cf	99	78.057	ENSCHOG00000009089	A1CF	99	78.057	Choloepus_hoffmanni
ENSPNAG00000007704	a1cf	100	79.139	ENSCPBG00000026464	A1CF	100	78.974	Chrysemys_picta_bellii
ENSPNAG00000007704	a1cf	100	79.636	ENSCANG00000038032	A1CF	100	79.636	Colobus_angolensis_palliatus
ENSPNAG00000007704	a1cf	100	78.808	ENSCGRG00001017413	A1cf	100	78.974	Cricetulus_griseus_chok1gshd
ENSPNAG00000007704	a1cf	100	78.146	ENSCGRG00000017332	A1cf	100	78.477	Cricetulus_griseus_crigri
ENSPNAG00000007704	a1cf	100	81.086	ENSCSEG00000002361	a1cf	100	81.414	Cynoglossus_semilaevis
ENSPNAG00000007704	a1cf	100	81.414	ENSCVAG00000010520	a1cf	100	82.237	Cyprinodon_variegatus
ENSPNAG00000007704	a1cf	100	90.101	ENSDARG00000002968	a1cf	100	90.101	Danio_rerio
ENSPNAG00000007704	a1cf	100	79.305	ENSDNOG00000002829	A1CF	100	79.305	Dasypus_novemcinctus
ENSPNAG00000007704	a1cf	82	85.507	ENSETEG00000012527	A1CF	81	85.507	Echinops_telfairi
ENSPNAG00000007704	a1cf	100	80.298	ENSEASG00005012924	A1CF	100	80.464	Equus_asinus_asinus
ENSPNAG00000007704	a1cf	100	79.967	ENSECAG00000010424	A1CF	100	80.132	Equus_caballus
ENSPNAG00000007704	a1cf	79	71.581	ENSEEUG00000000013	A1CF	97	72.667	Erinaceus_europaeus
ENSPNAG00000007704	a1cf	100	85.762	ENSELUG00000003159	a1cf	100	85.762	Esox_lucius
ENSPNAG00000007704	a1cf	100	80.034	ENSFCAG00000011179	A1CF	100	80.705	Felis_catus
ENSPNAG00000007704	a1cf	100	81.544	ENSFALG00000013183	A1CF	100	81.376	Ficedula_albicollis
ENSPNAG00000007704	a1cf	100	80.201	ENSFDAG00000019371	A1CF	100	80.201	Fukomys_damarensis
ENSPNAG00000007704	a1cf	100	75.327	ENSFHEG00000019652	a1cf	96	87.500	Fundulus_heteroclitus
ENSPNAG00000007704	a1cf	100	76.557	ENSGMOG00000018943	a1cf	100	76.596	Gadus_morhua
ENSPNAG00000007704	a1cf	95	79.545	ENSGALG00000003765	A1CF	96	79.371	Gallus_gallus
ENSPNAG00000007704	a1cf	100	77.318	ENSGAFG00000014868	a1cf	100	77.152	Gambusia_affinis
ENSPNAG00000007704	a1cf	100	79.836	ENSGACG00000010241	a1cf	100	80.492	Gasterosteus_aculeatus
ENSPNAG00000007704	a1cf	95	78.783	ENSGAGG00000016508	A1CF	97	78.609	Gopherus_agassizii
ENSPNAG00000007704	a1cf	100	79.967	ENSGGOG00000009670	A1CF	100	79.967	Gorilla_gorilla
ENSPNAG00000007704	a1cf	100	83.526	ENSHBUG00000021959	a1cf	100	84.375	Haplochromis_burtoni
ENSPNAG00000007704	a1cf	100	78.642	ENSHGLG00000008955	A1CF	100	78.974	Heterocephalus_glaber_female
ENSPNAG00000007704	a1cf	100	77.980	ENSHGLG00100000518	A1CF	100	78.311	Heterocephalus_glaber_male
ENSPNAG00000007704	a1cf	100	73.506	ENSHCOG00000017669	a1cf	100	75.606	Hippocampus_comes
ENSPNAG00000007704	a1cf	89	94.238	ENSIPUG00000010367	a1cf	96	94.403	Ictalurus_punctatus
ENSPNAG00000007704	a1cf	100	81.463	ENSKMAG00000006568	a1cf	100	82.602	Kryptolebias_marmoratus
ENSPNAG00000007704	a1cf	99	82.305	ENSLBEG00000020994	a1cf	98	82.680	Labrus_bergylta
ENSPNAG00000007704	a1cf	100	83.557	ENSLACG00000008061	A1CF	100	83.389	Latimeria_chalumnae
ENSPNAG00000007704	a1cf	100	86.755	ENSLOCG00000006302	a1cf	100	86.755	Lepisosteus_oculatus
ENSPNAG00000007704	a1cf	100	79.801	ENSLAFG00000015462	A1CF	100	80.629	Loxodonta_africana
ENSPNAG00000007704	a1cf	100	80.705	ENSMFAG00000035948	A1CF	100	80.705	Macaca_fascicularis
ENSPNAG00000007704	a1cf	100	80.705	ENSMMUG00000007077	A1CF	100	80.705	Macaca_mulatta
ENSPNAG00000007704	a1cf	100	80.369	ENSMNEG00000031454	A1CF	100	80.369	Macaca_nemestrina
ENSPNAG00000007704	a1cf	100	79.305	ENSMLEG00000037223	A1CF	100	79.305	Mandrillus_leucophaeus
ENSPNAG00000007704	a1cf	100	81.818	ENSMAMG00000010402	a1cf	100	82.838	Mastacembelus_armatus
ENSPNAG00000007704	a1cf	100	81.878	ENSMZEG00005013245	a1cf	100	81.908	Maylandia_zebra
ENSPNAG00000007704	a1cf	100	79.174	ENSMGAG00000001507	A1CF	100	79.008	Meleagris_gallopavo
ENSPNAG00000007704	a1cf	100	78.477	ENSMAUG00000007422	A1cf	100	78.808	Mesocricetus_auratus
ENSPNAG00000007704	a1cf	100	80.201	ENSMICG00000003377	A1CF	100	81.040	Microcebus_murinus
ENSPNAG00000007704	a1cf	100	79.801	ENSMOCG00000021536	A1cf	100	79.967	Microtus_ochrogaster
ENSPNAG00000007704	a1cf	100	72.937	ENSMMOG00000009422	a1cf	100	73.762	Mola_mola
ENSPNAG00000007704	a1cf	89	81.474	ENSMODG00000016478	A1CF	97	82.197	Monodelphis_domestica
ENSPNAG00000007704	a1cf	100	78.297	ENSMALG00000012992	a1cf	100	78.297	Monopterus_albus
ENSPNAG00000007704	a1cf	100	79.362	MGP_CAROLIEiJ_G0022873	A1cf	100	79.362	Mus_caroli
ENSPNAG00000007704	a1cf	100	79.362	ENSMUSG00000052595	A1cf	99	83.946	Mus_musculus
ENSPNAG00000007704	a1cf	100	78.691	MGP_PahariEiJ_G0014366	A1cf	100	78.691	Mus_pahari
ENSPNAG00000007704	a1cf	100	79.362	MGP_SPRETEiJ_G0023792	A1cf	100	79.362	Mus_spretus
ENSPNAG00000007704	a1cf	100	73.675	ENSMPUG00000016971	A1CF	100	73.841	Mustela_putorius_furo
ENSPNAG00000007704	a1cf	100	78.974	ENSMLUG00000016071	A1CF	100	79.305	Myotis_lucifugus
ENSPNAG00000007704	a1cf	100	79.470	ENSNGAG00000015136	A1cf	100	79.470	Nannospalax_galili
ENSPNAG00000007704	a1cf	100	83.690	ENSNBRG00000001712	a1cf	100	84.539	Neolamprologus_brichardi
ENSPNAG00000007704	a1cf	100	80.298	ENSNLEG00000012028	A1CF	100	80.298	Nomascus_leucogenys
ENSPNAG00000007704	a1cf	94	81.172	ENSMEUG00000015909	A1CF	100	81.172	Notamacropus_eugenii
ENSPNAG00000007704	a1cf	88	71.698	ENSOPRG00000010667	A1CF	97	71.455	Ochotona_princeps
ENSPNAG00000007704	a1cf	100	84.185	ENSONIG00000019105	a1cf	100	84.375	Oreochromis_niloticus
ENSPNAG00000007704	a1cf	78	82.112	ENSOANG00000007360	A1CF	99	82.112	Ornithorhynchus_anatinus
ENSPNAG00000007704	a1cf	100	80.369	ENSOCUG00000011587	A1CF	100	80.705	Oryctolagus_cuniculus
ENSPNAG00000007704	a1cf	100	78.049	ENSORLG00000013342	a1cf	100	77.724	Oryzias_latipes
ENSPNAG00000007704	a1cf	100	79.708	ENSORLG00020000586	a1cf	100	80.195	Oryzias_latipes_hni
ENSPNAG00000007704	a1cf	100	79.708	ENSORLG00015018569	a1cf	100	80.195	Oryzias_latipes_hsok
ENSPNAG00000007704	a1cf	100	81.488	ENSOMEG00000013531	a1cf	100	81.322	Oryzias_melastigma
ENSPNAG00000007704	a1cf	100	77.980	ENSOGAG00000012884	A1CF	100	79.305	Otolemur_garnettii
ENSPNAG00000007704	a1cf	100	79.967	ENSOARG00000013695	A1CF	100	80.132	Ovis_aries
ENSPNAG00000007704	a1cf	97	79.010	ENSPPAG00000028115	A1CF	99	83.166	Pan_paniscus
ENSPNAG00000007704	a1cf	100	78.974	ENSPPRG00000012180	A1CF	100	79.636	Panthera_pardus
ENSPNAG00000007704	a1cf	100	78.974	ENSPTIG00000021223	A1CF	100	79.636	Panthera_tigris_altaica
ENSPNAG00000007704	a1cf	100	80.872	ENSPTRG00000002508	A1CF	100	80.872	Pan_troglodytes
ENSPNAG00000007704	a1cf	100	80.705	ENSPANG00000021988	A1CF	100	80.705	Papio_anubis
ENSPNAG00000007704	a1cf	100	87.583	ENSPKIG00000025176	a1cf	100	87.417	Paramormyrops_kingsleyae
ENSPNAG00000007704	a1cf	100	80.705	ENSPSIG00000010318	A1CF	100	80.537	Pelodiscus_sinensis
ENSPNAG00000007704	a1cf	98	70.528	ENSPMGG00000013359	a1cf	99	71.550	Periophthalmus_magnuspinnatus
ENSPNAG00000007704	a1cf	100	79.139	ENSPEMG00000015021	A1cf	100	79.139	Peromyscus_maniculatus_bairdii
ENSPNAG00000007704	a1cf	100	80.034	ENSPCIG00000002175	A1CF	100	80.872	Phascolarctos_cinereus
ENSPNAG00000007704	a1cf	100	81.331	ENSPFOG00000007437	-	100	82.143	Poecilia_formosa
ENSPNAG00000007704	a1cf	100	81.494	ENSPFOG00000006683	a1cf	100	82.305	Poecilia_formosa
ENSPNAG00000007704	a1cf	100	82.566	ENSPLAG00000000026	a1cf	100	83.388	Poecilia_latipinna
ENSPNAG00000007704	a1cf	100	82.566	ENSPLAG00000001210	-	100	83.388	Poecilia_latipinna
ENSPNAG00000007704	a1cf	100	73.616	ENSPMEG00000015529	-	100	74.430	Poecilia_mexicana
ENSPNAG00000007704	a1cf	100	74.587	ENSPMEG00000000921	a1cf	100	75.413	Poecilia_mexicana
ENSPNAG00000007704	a1cf	100	81.169	ENSPREG00000016298	a1cf	100	81.981	Poecilia_reticulata
ENSPNAG00000007704	a1cf	100	81.544	ENSPPYG00000002819	A1CF	100	81.544	Pongo_abelii
ENSPNAG00000007704	a1cf	80	64.135	ENSPCAG00000006463	A1CF	79	64.135	Procavia_capensis
ENSPNAG00000007704	a1cf	100	78.477	ENSPCOG00000024172	A1CF	100	79.636	Propithecus_coquereli
ENSPNAG00000007704	a1cf	100	82.764	ENSPNYG00000017944	a1cf	100	83.604	Pundamilia_nyererei
ENSPNAG00000007704	a1cf	100	79.530	ENSRNOG00000033195	A1cf	100	79.530	Rattus_norvegicus
ENSPNAG00000007704	a1cf	100	74.092	ENSRBIG00000042892	A1CF	100	79.492	Rhinopithecus_bieti
ENSPNAG00000007704	a1cf	100	79.636	ENSRROG00000041398	A1CF	99	80.995	Rhinopithecus_roxellana
ENSPNAG00000007704	a1cf	100	80.464	ENSSBOG00000021930	A1CF	100	81.641	Saimiri_boliviensis_boliviensis
ENSPNAG00000007704	a1cf	100	80.872	ENSSHAG00000005096	A1CF	100	80.872	Sarcophilus_harrisii
ENSPNAG00000007704	a1cf	100	90.940	ENSSFOG00015011774	a1cf	100	90.940	Scleropages_formosus
ENSPNAG00000007704	a1cf	100	81.494	ENSSMAG00000013271	a1cf	100	81.494	Scophthalmus_maximus
ENSPNAG00000007704	a1cf	100	83.087	ENSSDUG00000013930	a1cf	100	83.087	Seriola_dumerili
ENSPNAG00000007704	a1cf	100	78.642	ENSSLDG00000004290	a1cf	100	78.477	Seriola_lalandi_dorsalis
ENSPNAG00000007704	a1cf	95	73.322	ENSSARG00000005940	A1CF	95	73.498	Sorex_araneus
ENSPNAG00000007704	a1cf	97	76.792	ENSSPUG00000006797	A1CF	96	76.792	Sphenodon_punctatus
ENSPNAG00000007704	a1cf	100	80.795	ENSSSCG00000010431	A1CF	100	80.960	Sus_scrofa
ENSPNAG00000007704	a1cf	100	80.298	ENSTGUG00000005090	A1CF	100	80.298	Taeniopygia_guttata
ENSPNAG00000007704	a1cf	100	79.870	ENSTRUG00000001982	a1cf	100	79.545	Takifugu_rubripes
ENSPNAG00000007704	a1cf	100	79.126	ENSTNIG00000003580	a1cf	100	78.964	Tetraodon_nigroviridis
ENSPNAG00000007704	a1cf	97	75.606	ENSTTRG00000013190	A1CF	95	75.779	Tursiops_truncatus
ENSPNAG00000007704	a1cf	100	80.369	ENSUAMG00000020065	A1CF	100	80.369	Ursus_americanus
ENSPNAG00000007704	a1cf	100	78.974	ENSUMAG00000011162	A1CF	100	78.974	Ursus_maritimus
ENSPNAG00000007704	a1cf	87	77.649	ENSVPAG00000006130	A1CF	86	77.649	Vicugna_pacos
ENSPNAG00000007704	a1cf	100	80.705	ENSVVUG00000002504	A1CF	100	80.705	Vulpes_vulpes
ENSPNAG00000007704	a1cf	100	73.675	ENSXETG00000006611	a1cf	100	73.510	Xenopus_tropicalis
ENSPNAG00000007704	a1cf	100	83.940	ENSXCOG00000003302	a1cf	100	83.775	Xiphophorus_couchianus
ENSPNAG00000007704	a1cf	100	82.843	ENSXMAG00000016703	a1cf	100	82.680	Xiphophorus_maculatus