EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000007718 (Gene tree)
Gene ID: 108432634
Gene Symbol: -
Alias: -
Full Name: ribosomal RNA processing protein 1 homolog B-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 21763 bases
Position: chrKV575407.1:2149107-2170869
Accession: 108432634
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000000759	Nop52	PF05997.12	6.9e-63	1	1
ENSPNAP00000000764	Nop52	PF05997.12	7.5e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000013298	-	8067	XM_017706619	ENSPNAP00000000764	1018 (aa)	XP_017562108	UPI000814ADAA
ENSPNAT00000013304	-	7899	XM_017706620	ENSPNAP00000000759	962 (aa)	XP_017562109	UPI00081434E0

Gene Model

Click here to download ENSPNAG00000007718's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000007718's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000007718	-	51	44.258	ENSG00000160208	RRP1B	55	57.500	Homo_sapiens
ENSPNAG00000007718	-	53	58.750	ENSAMEG00000011401	RRP1B	68	62.500	Ailuropoda_melanoleuca
ENSPNAG00000007718	-	50	46.512	ENSANAG00000034889	RRP1B	56	59.302	Aotus_nancymaae
ENSPNAG00000007718	-	64	44.034	ENSCJAG00000017077	RRP1B	54	60.000	Callithrix_jacchus
ENSPNAG00000007718	-	50	45.349	ENSCCAG00000029384	RRP1B	55	60.000	Cebus_capucinus
ENSPNAG00000007718	-	50	50.284	ENSCPBG00000010310	RRP1B	59	48.913	Chrysemys_picta_bellii
ENSPNAG00000007718	-	51	42.045	ENSCGRG00001023882	-	59	60.241	Cricetulus_griseus_chok1gshd
ENSPNAG00000007718	-	51	42.045	ENSCGRG00001010889	-	59	60.241	Cricetulus_griseus_chok1gshd
ENSPNAG00000007718	-	53	54.674	ENSDARG00000103337	rrp1	63	55.263	Danio_rerio
ENSPNAG00000007718	-	50	44.253	ENSEASG00005001687	RRP1B	56	58.750	Equus_asinus_asinus
ENSPNAG00000007718	-	51	44.828	ENSECAG00000018018	RRP1B	56	58.750	Equus_caballus
ENSPNAG00000007718	-	51	44.258	ENSGGOG00000012069	RRP1B	55	57.500	Gorilla_gorilla
ENSPNAG00000007718	-	57	69.492	ENSIPUG00000000673	-	72	66.755	Ictalurus_punctatus
ENSPNAG00000007718	-	69	58.873	ENSLOCG00000004064	-	71	53.421	Lepisosteus_oculatus
ENSPNAG00000007718	-	50	62.500	ENSMAMG00000007131	-	50	61.538	Mastacembelus_armatus
ENSPNAG00000007718	-	58	45.658	ENSMODG00000021033	RRP1B	65	58.750	Monodelphis_domestica
ENSPNAG00000007718	-	62	41.787	MGP_CAROLIEiJ_G0021376	Rrp1b	61	54.167	Mus_caroli
ENSPNAG00000007718	-	62	41.499	MGP_PahariEiJ_G0023695	Rrp1b	61	52.778	Mus_pahari
ENSPNAG00000007718	-	56	59.756	ENSMLUG00000007738	RRP1B	71	58.537	Myotis_lucifugus
ENSPNAG00000007718	-	53	43.889	ENSNGAG00000021073	Rrp1b	80	42.623	Nannospalax_galili
ENSPNAG00000007718	-	50	44.413	ENSNLEG00000001490	RRP1B	57	57.500	Nomascus_leucogenys
ENSPNAG00000007718	-	52	52.357	ENSORLG00020007199	-	55	56.780	Oryzias_latipes_hni
ENSPNAG00000007718	-	52	50.976	ENSORLG00015004425	-	64	50.569	Oryzias_latipes_hsok
ENSPNAG00000007718	-	53	43.909	ENSPPRG00000010356	RRP1B	56	56.250	Panthera_pardus
ENSPNAG00000007718	-	52	44.413	ENSPTRG00000013958	RRP1B	55	57.500	Pan_troglodytes
ENSPNAG00000007718	-	69	45.312	ENSPCIG00000015513	RRP1B	69	57.500	Phascolarctos_cinereus
ENSPNAG00000007718	-	50	57.143	ENSPFOG00000007424	-	66	57.143	Poecilia_formosa
ENSPNAG00000007718	-	58	58.405	ENSPMEG00000007042	-	78	48.951	Poecilia_mexicana
ENSPNAG00000007718	-	52	58.239	ENSPREG00000015673	-	56	58.239	Poecilia_reticulata
ENSPNAG00000007718	-	51	44.258	ENSPPYG00000011470	RRP1B	55	57.500	Pongo_abelii
ENSPNAG00000007718	-	62	42.363	ENSRNOG00000001194	Rrp1b	56	57.955	Rattus_norvegicus