EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000007847 (Gene tree)
Gene ID: 108414001
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 26486 bases
Position: chrKV576662.1:48016-74501
Accession: 108414001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000023308	zf-RanBP	PF00641.18	8.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000012974	-	2465	XM_017686737	ENSPNAP00000023308	721 (aa)	XP_017542226	UPI0008148359

Gene Model

Click here to download ENSPNAG00000007847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000007847's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000007847	shrprbck1r	55	50.617	ENSPNAG00000002911	sharpin	99	51.852

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000007847	shrprbck1r	60	59.361	ENSAPOG00000023352	sharpin	95	58.676	Acanthochromis_polyacanthus
ENSPNAG00000007847	shrprbck1r	100	70.041	ENSAPOG00000022737	shrprbck1r	100	69.904	Acanthochromis_polyacanthus
ENSPNAG00000007847	shrprbck1r	100	69.482	ENSACIG00000002184	shrprbck1r	100	69.116	Amphilophus_citrinellus
ENSPNAG00000007847	shrprbck1r	100	70.588	ENSAOCG00000002890	shrprbck1r	100	70.451	Amphiprion_ocellaris
ENSPNAG00000007847	shrprbck1r	60	59.545	ENSAOCG00000017464	sharpin	95	59.132	Amphiprion_ocellaris
ENSPNAG00000007847	shrprbck1r	60	59.545	ENSAPEG00000004049	sharpin	95	59.132	Amphiprion_percula
ENSPNAG00000007847	shrprbck1r	100	69.767	ENSAPEG00000023274	shrprbck1r	100	69.631	Amphiprion_percula
ENSPNAG00000007847	shrprbck1r	100	68.082	ENSATEG00000014561	shrprbck1r	100	66.532	Anabas_testudineus
ENSPNAG00000007847	shrprbck1r	60	59.909	ENSATEG00000007832	sharpin	87	59.681	Anabas_testudineus
ENSPNAG00000007847	shrprbck1r	100	69.178	ENSACLG00000022609	shrprbck1r	100	68.989	Astatotilapia_calliptera
ENSPNAG00000007847	shrprbck1r	100	89.388	ENSAMXG00000021016	shrprbck1r	100	88.571	Astyanax_mexicanus
ENSPNAG00000007847	shrprbck1r	55	55.198	ENSAMXG00000006229	sharpin	97	55.198	Astyanax_mexicanus
ENSPNAG00000007847	shrprbck1r	100	65.253	ENSCSEG00000011306	shrprbck1r	100	65.390	Cynoglossus_semilaevis
ENSPNAG00000007847	shrprbck1r	100	69.210	ENSCVAG00000007250	shrprbck1r	100	68.852	Cyprinodon_variegatus
ENSPNAG00000007847	shrprbck1r	60	56.916	ENSCVAG00000006586	sharpin	95	56.236	Cyprinodon_variegatus
ENSPNAG00000007847	shrprbck1r	100	76.966	ENSDARG00000059871	shrprbck1r	100	76.828	Danio_rerio
ENSPNAG00000007847	shrprbck1r	56	54.034	ENSDARG00000076995	sharpin	94	54.568	Danio_rerio
ENSPNAG00000007847	shrprbck1r	100	72.055	ENSELUG00000016022	shrprbck1r	100	72.138	Esox_lucius
ENSPNAG00000007847	shrprbck1r	60	57.701	ENSFHEG00000013564	sharpin	94	57.208	Fundulus_heteroclitus
ENSPNAG00000007847	shrprbck1r	50	60.423	ENSGMOG00000010123	sharpin	91	58.358	Gadus_morhua
ENSPNAG00000007847	shrprbck1r	100	66.530	ENSGAFG00000009309	shrprbck1r	100	66.211	Gambusia_affinis
ENSPNAG00000007847	shrprbck1r	60	44.165	ENSGAFG00000021405	sharpin	95	43.341	Gambusia_affinis
ENSPNAG00000007847	shrprbck1r	75	70.350	ENSGACG00000002544	shrprbck1r	99	70.818	Gasterosteus_aculeatus
ENSPNAG00000007847	shrprbck1r	100	69.672	ENSHBUG00000021933	shrprbck1r	100	69.262	Haplochromis_burtoni
ENSPNAG00000007847	shrprbck1r	60	54.338	ENSHCOG00000018847	sharpin	80	55.000	Hippocampus_comes
ENSPNAG00000007847	shrprbck1r	53	81.481	ENSIPUG00000011951	sharpin	98	81.481	Ictalurus_punctatus
ENSPNAG00000007847	shrprbck1r	97	81.089	ENSIPUG00000014247	shrprbck1r	96	81.089	Ictalurus_punctatus
ENSPNAG00000007847	shrprbck1r	60	57.991	ENSKMAG00000015204	sharpin	76	57.569	Kryptolebias_marmoratus
ENSPNAG00000007847	shrprbck1r	100	66.712	ENSKMAG00000015215	shrprbck1r	95	68.421	Kryptolebias_marmoratus
ENSPNAG00000007847	shrprbck1r	60	59.729	ENSLBEG00000016624	sharpin	95	59.276	Labrus_bergylta
ENSPNAG00000007847	shrprbck1r	100	69.083	ENSLBEG00000016876	shrprbck1r	100	68.904	Labrus_bergylta
ENSPNAG00000007847	shrprbck1r	96	53.768	ENSLACG00000010948	-	97	53.768	Latimeria_chalumnae
ENSPNAG00000007847	shrprbck1r	100	70.919	ENSLOCG00000008910	shrprbck1r	100	70.508	Lepisosteus_oculatus
ENSPNAG00000007847	shrprbck1r	100	67.400	ENSMAMG00000022930	shrprbck1r	100	67.490	Mastacembelus_armatus
ENSPNAG00000007847	shrprbck1r	51	66.667	ENSMAMG00000014645	sharpin	95	66.667	Mastacembelus_armatus
ENSPNAG00000007847	shrprbck1r	100	69.041	ENSMZEG00005021257	shrprbck1r	100	68.852	Maylandia_zebra
ENSPNAG00000007847	shrprbck1r	100	68.071	ENSMMOG00000003764	shrprbck1r	100	68.443	Mola_mola
ENSPNAG00000007847	shrprbck1r	96	71.245	ENSMALG00000008861	shrprbck1r	95	71.245	Monopterus_albus
ENSPNAG00000007847	shrprbck1r	51	66.667	ENSMALG00000020528	sharpin	96	66.667	Monopterus_albus
ENSPNAG00000007847	shrprbck1r	100	69.041	ENSNBRG00000002270	shrprbck1r	100	68.852	Neolamprologus_brichardi
ENSPNAG00000007847	shrprbck1r	100	69.220	ENSONIG00000014401	shrprbck1r	100	69.031	Oreochromis_niloticus
ENSPNAG00000007847	shrprbck1r	55	53.938	ENSONIG00000009626	-	96	53.938	Oreochromis_niloticus
ENSPNAG00000007847	shrprbck1r	60	58.465	ENSORLG00000017281	sharpin	95	58.277	Oryzias_latipes
ENSPNAG00000007847	shrprbck1r	100	67.030	ENSORLG00000007392	shrprbck1r	100	66.895	Oryzias_latipes
ENSPNAG00000007847	shrprbck1r	60	58.503	ENSORLG00020000801	sharpin	95	57.753	Oryzias_latipes_hni
ENSPNAG00000007847	shrprbck1r	100	66.894	ENSORLG00020018619	shrprbck1r	100	66.758	Oryzias_latipes_hni
ENSPNAG00000007847	shrprbck1r	60	58.730	ENSORLG00015009860	sharpin	95	57.978	Oryzias_latipes_hsok
ENSPNAG00000007847	shrprbck1r	100	66.027	ENSORLG00015018865	shrprbck1r	100	66.027	Oryzias_latipes_hsok
ENSPNAG00000007847	shrprbck1r	52	74.074	ENSOMEG00000005729	sharpin	89	74.074	Oryzias_melastigma
ENSPNAG00000007847	shrprbck1r	100	68.349	ENSOMEG00000012749	shrprbck1r	100	68.363	Oryzias_melastigma
ENSPNAG00000007847	shrprbck1r	65	61.603	ENSPKIG00000018308	-	95	61.392	Paramormyrops_kingsleyae
ENSPNAG00000007847	shrprbck1r	100	72.992	ENSPKIG00000006933	shrprbck1r	100	72.992	Paramormyrops_kingsleyae
ENSPNAG00000007847	shrprbck1r	100	66.529	ENSPMGG00000013254	shrprbck1r	100	66.529	Periophthalmus_magnuspinnatus
ENSPNAG00000007847	shrprbck1r	60	56.979	ENSPFOG00000015253	sharpin	95	56.293	Poecilia_formosa
ENSPNAG00000007847	shrprbck1r	100	67.847	ENSPFOG00000004214	shrprbck1r	100	67.400	Poecilia_formosa
ENSPNAG00000007847	shrprbck1r	100	67.808	ENSPLAG00000020523	shrprbck1r	100	67.125	Poecilia_latipinna
ENSPNAG00000007847	shrprbck1r	60	57.208	ENSPLAG00000000423	sharpin	95	56.522	Poecilia_latipinna
ENSPNAG00000007847	shrprbck1r	100	67.531	ENSPMEG00000006877	shrprbck1r	100	67.080	Poecilia_mexicana
ENSPNAG00000007847	shrprbck1r	60	57.208	ENSPREG00000009702	sharpin	95	56.522	Poecilia_reticulata
ENSPNAG00000007847	shrprbck1r	100	67.901	ENSPREG00000014689	shrprbck1r	100	67.218	Poecilia_reticulata
ENSPNAG00000007847	shrprbck1r	100	69.452	ENSPNYG00000022601	shrprbck1r	100	69.262	Pundamilia_nyererei
ENSPNAG00000007847	shrprbck1r	74	64.760	ENSSFOG00015014150	-	96	64.760	Scleropages_formosus
ENSPNAG00000007847	shrprbck1r	64	51.800	ENSSFOG00015004028	sharpin	99	51.163	Scleropages_formosus
ENSPNAG00000007847	shrprbck1r	100	68.293	ENSSMAG00000018085	shrprbck1r	100	68.428	Scophthalmus_maximus
ENSPNAG00000007847	shrprbck1r	100	70.588	ENSSDUG00000002959	shrprbck1r	100	70.742	Seriola_dumerili
ENSPNAG00000007847	shrprbck1r	61	46.032	ENSSDUG00000019039	sharpin	96	45.351	Seriola_dumerili
ENSPNAG00000007847	shrprbck1r	100	70.588	ENSSLDG00000009026	shrprbck1r	100	70.742	Seriola_lalandi_dorsalis
ENSPNAG00000007847	shrprbck1r	96	69.744	ENSSPAG00000016097	shrprbck1r	98	69.209	Stegastes_partitus
ENSPNAG00000007847	shrprbck1r	60	51.474	ENSTRUG00000011046	sharpin	95	52.154	Takifugu_rubripes
ENSPNAG00000007847	shrprbck1r	100	66.621	ENSTRUG00000006949	shrprbck1r	100	66.575	Takifugu_rubripes
ENSPNAG00000007847	shrprbck1r	55	54.808	ENSTNIG00000008521	sharpin	94	54.808	Tetraodon_nigroviridis
ENSPNAG00000007847	shrprbck1r	51	67.742	ENSXCOG00000015019	sharpin	96	67.742	Xiphophorus_couchianus
ENSPNAG00000007847	shrprbck1r	100	65.984	ENSXCOG00000006701	shrprbck1r	100	65.663	Xiphophorus_couchianus
ENSPNAG00000007847	shrprbck1r	60	57.895	ENSXMAG00000022076	sharpin	95	57.208	Xiphophorus_maculatus
ENSPNAG00000007847	shrprbck1r	100	65.984	ENSXMAG00000018972	shrprbck1r	100	65.663	Xiphophorus_maculatus