EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000007912 (Gene tree)
Gene ID: 108432615
Gene Symbol: cmss1
Alias: zgc:101814
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 12024 bases
Position: chrKV575407.1:1599981-1612004
Accession: 108432615
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000001053	CMS1	PF14617.6	2.8e-29	1	1
ENSPNAP00000001053	DEAD	PF00270.29	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000012813	-	2628	XM_017706575	ENSPNAP00000001053	294 (aa)	XP_017562064	UPI00081477DE

Gene Model

Click here to download ENSPNAG00000007912's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000007912's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000007912	cmss1	100	48.344	ENSG00000184220	CMSS1	98	58.750	Homo_sapiens
ENSPNAG00000007912	cmss1	69	70.936	ENSAPOG00000010604	cmss1	82	70.936	Acanthochromis_polyacanthus
ENSPNAG00000007912	cmss1	82	52.869	ENSAMEG00000004092	CMSS1	93	52.869	Ailuropoda_melanoleuca
ENSPNAG00000007912	cmss1	74	61.644	ENSACIG00000021854	cmss1	98	57.692	Amphilophus_citrinellus
ENSPNAG00000007912	cmss1	100	56.122	ENSAOCG00000013361	cmss1	100	61.224	Amphiprion_ocellaris
ENSPNAG00000007912	cmss1	100	59.524	ENSAPEG00000005829	cmss1	100	60.204	Amphiprion_percula
ENSPNAG00000007912	cmss1	100	60.884	ENSATEG00000008209	cmss1	100	61.017	Anabas_testudineus
ENSPNAG00000007912	cmss1	78	58.696	ENSAPLG00000010542	CMSS1	99	58.696	Anas_platyrhynchos
ENSPNAG00000007912	cmss1	84	54.251	ENSACAG00000011065	CMSS1	90	54.251	Anolis_carolinensis
ENSPNAG00000007912	cmss1	100	47.811	ENSANAG00000023565	CMSS1	100	47.811	Aotus_nancymaae
ENSPNAG00000007912	cmss1	100	59.864	ENSACLG00000027294	cmss1	100	60.204	Astatotilapia_calliptera
ENSPNAG00000007912	cmss1	100	75.084	ENSAMXG00000002046	cmss1	100	75.421	Astyanax_mexicanus
ENSPNAG00000007912	cmss1	100	48.980	ENSBTAG00000013663	CMSS1	100	48.649	Bos_taurus
ENSPNAG00000007912	cmss1	100	49.832	ENSCJAG00000000610	CMSS1	100	49.495	Callithrix_jacchus
ENSPNAG00000007912	cmss1	82	54.321	ENSCAFG00000009230	CMSS1	87	53.086	Canis_familiaris
ENSPNAG00000007912	cmss1	97	48.951	ENSCAFG00020009464	-	96	47.902	Canis_lupus_dingo
ENSPNAG00000007912	cmss1	69	56.436	ENSCAFG00020024156	-	63	56.436	Canis_lupus_dingo
ENSPNAG00000007912	cmss1	97	48.592	ENSCHIG00000013003	CMSS1	97	47.887	Capra_hircus
ENSPNAG00000007912	cmss1	82	53.909	ENSTSYG00000009266	CMSS1	92	52.675	Carlito_syrichta
ENSPNAG00000007912	cmss1	73	47.442	ENSCAPG00000013584	CMSS1	88	50.802	Cavia_aperea
ENSPNAG00000007912	cmss1	100	50.676	ENSCPOG00000014680	CMSS1	100	49.834	Cavia_porcellus
ENSPNAG00000007912	cmss1	100	49.495	ENSCCAG00000034685	CMSS1	100	49.495	Cebus_capucinus
ENSPNAG00000007912	cmss1	100	47.841	ENSCATG00000031980	CMSS1	100	47.176	Cercocebus_atys
ENSPNAG00000007912	cmss1	79	54.545	ENSCLAG00000011241	CMSS1	97	53.247	Chinchilla_lanigera
ENSPNAG00000007912	cmss1	77	51.695	ENSCSAG00000006024	CMSS1	93	52.381	Chlorocebus_sabaeus
ENSPNAG00000007912	cmss1	100	38.644	ENSCHOG00000012098	CMSS1	100	36.395	Choloepus_hoffmanni
ENSPNAG00000007912	cmss1	64	41.361	ENSCING00000014848	-	99	41.711	Ciona_intestinalis
ENSPNAG00000007912	cmss1	100	47.841	ENSCANG00000031337	CMSS1	100	47.176	Colobus_angolensis_palliatus
ENSPNAG00000007912	cmss1	100	48.013	ENSCGRG00001014305	Cmss1	100	48.515	Cricetulus_griseus_chok1gshd
ENSPNAG00000007912	cmss1	82	53.498	ENSCGRG00000006722	Cmss1	88	53.478	Cricetulus_griseus_crigri
ENSPNAG00000007912	cmss1	100	56.711	ENSCSEG00000004958	cmss1	100	57.333	Cynoglossus_semilaevis
ENSPNAG00000007912	cmss1	100	58.844	ENSCVAG00000005039	cmss1	100	58.844	Cyprinodon_variegatus
ENSPNAG00000007912	cmss1	100	63.300	ENSDARG00000112579	cmss1	100	64.765	Danio_rerio
ENSPNAG00000007912	cmss1	84	52.227	ENSDNOG00000040418	CMSS1	88	51.417	Dasypus_novemcinctus
ENSPNAG00000007912	cmss1	100	49.664	ENSDORG00000010461	Cmss1	100	48.322	Dipodomys_ordii
ENSPNAG00000007912	cmss1	79	54.545	ENSEASG00005010966	CMSS1	100	54.545	Equus_asinus_asinus
ENSPNAG00000007912	cmss1	94	49.091	ENSECAG00000015662	CMSS1	99	52.174	Equus_caballus
ENSPNAG00000007912	cmss1	100	34.354	ENSEEUG00000007624	-	100	34.354	Erinaceus_europaeus
ENSPNAG00000007912	cmss1	100	56.106	ENSELUG00000019459	cmss1	100	55.776	Esox_lucius
ENSPNAG00000007912	cmss1	100	50.165	ENSFCAG00000044577	CMSS1	100	49.175	Felis_catus
ENSPNAG00000007912	cmss1	78	57.391	ENSFALG00000005816	CMSS1	95	56.522	Ficedula_albicollis
ENSPNAG00000007912	cmss1	79	54.113	ENSFDAG00000012577	CMSS1	99	53.680	Fukomys_damarensis
ENSPNAG00000007912	cmss1	80	64.530	ENSFHEG00000012008	cmss1	96	64.530	Fundulus_heteroclitus
ENSPNAG00000007912	cmss1	99	57.432	ENSGMOG00000016729	cmss1	100	59.107	Gadus_morhua
ENSPNAG00000007912	cmss1	89	54.023	ENSGALG00000015267	CMSS1	98	54.023	Gallus_gallus
ENSPNAG00000007912	cmss1	88	58.333	ENSGAFG00000021217	cmss1	98	55.515	Gambusia_affinis
ENSPNAG00000007912	cmss1	99	56.314	ENSGACG00000002798	cmss1	100	57.732	Gasterosteus_aculeatus
ENSPNAG00000007912	cmss1	82	57.025	ENSGAGG00000019861	CMSS1	93	54.733	Gopherus_agassizii
ENSPNAG00000007912	cmss1	93	48.561	ENSGGOG00000014125	CMSS1	98	47.842	Gorilla_gorilla
ENSPNAG00000007912	cmss1	100	60.204	ENSHBUG00000008431	cmss1	100	60.544	Haplochromis_burtoni
ENSPNAG00000007912	cmss1	79	54.978	ENSHGLG00000019481	CMSS1	93	53.680	Heterocephalus_glaber_female
ENSPNAG00000007912	cmss1	79	54.978	ENSHGLG00100010314	CMSS1	91	53.680	Heterocephalus_glaber_male
ENSPNAG00000007912	cmss1	100	55.519	ENSHCOG00000003222	cmss1	100	57.190	Hippocampus_comes
ENSPNAG00000007912	cmss1	100	70.068	ENSIPUG00000011591	cmss1	100	70.068	Ictalurus_punctatus
ENSPNAG00000007912	cmss1	100	47.959	ENSSTOG00000019366	CMSS1	100	47.959	Ictidomys_tridecemlineatus
ENSPNAG00000007912	cmss1	100	48.185	ENSJJAG00000014894	Cmss1	100	48.185	Jaculus_jaculus
ENSPNAG00000007912	cmss1	90	50.752	ENSKMAG00000002390	cmss1	82	59.606	Kryptolebias_marmoratus
ENSPNAG00000007912	cmss1	76	60.082	ENSLBEG00000006298	cmss1	83	66.176	Labrus_bergylta
ENSPNAG00000007912	cmss1	78	57.826	ENSLACG00000009293	CMSS1	99	57.826	Latimeria_chalumnae
ENSPNAG00000007912	cmss1	100	52.721	ENSLOCG00000009391	cmss1	100	51.701	Lepisosteus_oculatus
ENSPNAG00000007912	cmss1	79	53.680	ENSLAFG00000017509	CMSS1	99	52.814	Loxodonta_africana
ENSPNAG00000007912	cmss1	100	48.173	ENSMFAG00000045006	CMSS1	100	47.508	Macaca_fascicularis
ENSPNAG00000007912	cmss1	100	47.841	ENSMMUG00000002939	CMSS1	96	52.941	Macaca_mulatta
ENSPNAG00000007912	cmss1	100	48.173	ENSMNEG00000031315	CMSS1	100	47.508	Macaca_nemestrina
ENSPNAG00000007912	cmss1	100	47.841	ENSMLEG00000033660	CMSS1	100	47.176	Mandrillus_leucophaeus
ENSPNAG00000007912	cmss1	100	62.963	ENSMAMG00000017176	cmss1	100	62.963	Mastacembelus_armatus
ENSPNAG00000007912	cmss1	100	59.864	ENSMZEG00005021886	cmss1	100	60.204	Maylandia_zebra
ENSPNAG00000007912	cmss1	69	60.891	ENSMGAG00000014360	CMSS1	89	60.891	Meleagris_gallopavo
ENSPNAG00000007912	cmss1	100	34.884	ENSMAUG00000020609	Cmss1	100	34.551	Mesocricetus_auratus
ENSPNAG00000007912	cmss1	100	49.831	ENSMICG00000048977	CMSS1	100	49.153	Microcebus_murinus
ENSPNAG00000007912	cmss1	100	48.299	ENSMOCG00000021937	Cmss1	100	47.020	Microtus_ochrogaster
ENSPNAG00000007912	cmss1	69	67.980	ENSMMOG00000019794	cmss1	84	67.980	Mola_mola
ENSPNAG00000007912	cmss1	87	51.550	ENSMODG00000002275	CMSS1	89	53.333	Monodelphis_domestica
ENSPNAG00000007912	cmss1	100	62.034	ENSMALG00000004250	cmss1	100	61.824	Monopterus_albus
ENSPNAG00000007912	cmss1	100	49.153	MGP_CAROLIEiJ_G0020824	Cmss1	100	48.299	Mus_caroli
ENSPNAG00000007912	cmss1	100	49.153	ENSMUSG00000022748	Cmss1	100	48.814	Mus_musculus
ENSPNAG00000007912	cmss1	100	48.639	MGP_PahariEiJ_G0016524	Cmss1	100	48.639	Mus_pahari
ENSPNAG00000007912	cmss1	100	48.814	MGP_SPRETEiJ_G0021724	Cmss1	100	47.959	Mus_spretus
ENSPNAG00000007912	cmss1	82	54.132	ENSMPUG00000011324	CMSS1	92	52.893	Mustela_putorius_furo
ENSPNAG00000007912	cmss1	96	49.117	ENSMLUG00000001131	CMSS1	99	48.057	Myotis_lucifugus
ENSPNAG00000007912	cmss1	100	50.000	ENSNGAG00000020316	Cmss1	100	49.320	Nannospalax_galili
ENSPNAG00000007912	cmss1	100	59.864	ENSNBRG00000003095	cmss1	100	60.204	Neolamprologus_brichardi
ENSPNAG00000007912	cmss1	100	48.505	ENSNLEG00000034172	CMSS1	100	47.841	Nomascus_leucogenys
ENSPNAG00000007912	cmss1	79	46.320	ENSMEUG00000014505	CMSS1	99	46.320	Notamacropus_eugenii
ENSPNAG00000007912	cmss1	100	50.847	ENSOPRG00000002986	CMSS1	100	50.169	Ochotona_princeps
ENSPNAG00000007912	cmss1	100	46.801	ENSODEG00000003558	-	100	47.138	Octodon_degus
ENSPNAG00000007912	cmss1	100	49.662	ENSODEG00000005226	-	100	49.662	Octodon_degus
ENSPNAG00000007912	cmss1	100	41.356	ENSODEG00000009446	-	100	40.136	Octodon_degus
ENSPNAG00000007912	cmss1	100	44.218	ENSODEG00000001853	-	100	44.558	Octodon_degus
ENSPNAG00000007912	cmss1	69	68.473	ENSONIG00000006678	cmss1	99	62.791	Oreochromis_niloticus
ENSPNAG00000007912	cmss1	87	53.725	ENSOANG00000007529	CMSS1	99	57.576	Ornithorhynchus_anatinus
ENSPNAG00000007912	cmss1	82	54.321	ENSOCUG00000025366	CMSS1	87	54.321	Oryctolagus_cuniculus
ENSPNAG00000007912	cmss1	100	59.122	ENSORLG00000020340	cmss1	100	59.184	Oryzias_latipes
ENSPNAG00000007912	cmss1	76	57.965	ENSORLG00020012235	cmss1	86	60.099	Oryzias_latipes_hni
ENSPNAG00000007912	cmss1	88	54.717	ENSORLG00015015551	cmss1	99	54.717	Oryzias_latipes_hsok
ENSPNAG00000007912	cmss1	100	58.054	ENSOMEG00000012555	cmss1	100	60.000	Oryzias_melastigma
ENSPNAG00000007912	cmss1	79	55.411	ENSOGAG00000002045	CMSS1	99	54.545	Otolemur_garnettii
ENSPNAG00000007912	cmss1	94	49.819	ENSOARG00000017899	CMSS1	90	48.746	Ovis_aries
ENSPNAG00000007912	cmss1	96	48.582	ENSPPAG00000038515	CMSS1	96	47.423	Pan_paniscus
ENSPNAG00000007912	cmss1	100	49.175	ENSPPRG00000016767	CMSS1	100	49.175	Panthera_pardus
ENSPNAG00000007912	cmss1	100	48.845	ENSPTIG00000018274	CMSS1	100	48.845	Panthera_tigris_altaica
ENSPNAG00000007912	cmss1	100	48.675	ENSPTRG00000015157	CMSS1	100	48.013	Pan_troglodytes
ENSPNAG00000007912	cmss1	79	53.247	ENSPANG00000019980	CMSS1	90	52.381	Papio_anubis
ENSPNAG00000007912	cmss1	93	58.242	ENSPKIG00000012609	cmss1	99	59.341	Paramormyrops_kingsleyae
ENSPNAG00000007912	cmss1	78	59.565	ENSPSIG00000003849	CMSS1	99	57.826	Pelodiscus_sinensis
ENSPNAG00000007912	cmss1	77	65.385	ENSPMGG00000010286	cmss1	88	67.647	Periophthalmus_magnuspinnatus
ENSPNAG00000007912	cmss1	100	49.660	ENSPEMG00000016384	Cmss1	100	49.320	Peromyscus_maniculatus_bairdii
ENSPNAG00000007912	cmss1	69	52.941	ENSPMAG00000001146	cmss1	99	53.202	Petromyzon_marinus
ENSPNAG00000007912	cmss1	81	53.586	ENSPCIG00000015656	CMSS1	88	52.743	Phascolarctos_cinereus
ENSPNAG00000007912	cmss1	100	56.419	ENSPFOG00000016849	cmss1	100	57.627	Poecilia_formosa
ENSPNAG00000007912	cmss1	100	56.081	ENSPLAG00000008323	cmss1	100	57.288	Poecilia_latipinna
ENSPNAG00000007912	cmss1	100	56.757	ENSPMEG00000021020	cmss1	100	57.627	Poecilia_mexicana
ENSPNAG00000007912	cmss1	88	60.536	ENSPREG00000007618	cmss1	89	59.316	Poecilia_reticulata
ENSPNAG00000007912	cmss1	100	48.173	ENSPPYG00000013606	CMSS1	100	47.508	Pongo_abelii
ENSPNAG00000007912	cmss1	100	50.169	ENSPCOG00000020035	CMSS1	100	49.492	Propithecus_coquereli
ENSPNAG00000007912	cmss1	100	44.108	ENSPVAG00000017031	CMSS1	100	43.771	Pteropus_vampyrus
ENSPNAG00000007912	cmss1	91	60.448	ENSPNYG00000013428	cmss1	97	60.821	Pundamilia_nyererei
ENSPNAG00000007912	cmss1	78	53.043	ENSRNOG00000027888	Cmss1	88	53.043	Rattus_norvegicus
ENSPNAG00000007912	cmss1	100	47.508	ENSRBIG00000037931	CMSS1	100	46.844	Rhinopithecus_bieti
ENSPNAG00000007912	cmss1	100	47.508	ENSRROG00000042910	CMSS1	100	46.844	Rhinopithecus_roxellana
ENSPNAG00000007912	cmss1	93	49.270	ENSSBOG00000030980	CMSS1	98	49.270	Saimiri_boliviensis_boliviensis
ENSPNAG00000007912	cmss1	69	58.416	ENSSHAG00000009321	CMSS1	90	54.545	Sarcophilus_harrisii
ENSPNAG00000007912	cmss1	100	59.524	ENSSFOG00015001509	cmss1	100	60.544	Scleropages_formosus
ENSPNAG00000007912	cmss1	100	60.204	ENSSMAG00000001653	cmss1	100	60.544	Scophthalmus_maximus
ENSPNAG00000007912	cmss1	100	62.925	ENSSDUG00000007719	cmss1	100	63.265	Seriola_dumerili
ENSPNAG00000007912	cmss1	70	71.981	ENSSLDG00000012300	cmss1	92	61.538	Seriola_lalandi_dorsalis
ENSPNAG00000007912	cmss1	100	39.274	ENSSARG00000003584	CMSS1	100	39.274	Sorex_araneus
ENSPNAG00000007912	cmss1	78	58.696	ENSSPUG00000003865	CMSS1	100	57.826	Sphenodon_punctatus
ENSPNAG00000007912	cmss1	70	71.845	ENSSPAG00000019182	cmss1	81	60.806	Stegastes_partitus
ENSPNAG00000007912	cmss1	100	49.495	ENSSSCG00000011970	CMSS1	100	48.822	Sus_scrofa
ENSPNAG00000007912	cmss1	78	57.391	ENSTGUG00000013635	CMSS1	99	56.522	Taeniopygia_guttata
ENSPNAG00000007912	cmss1	100	58.163	ENSTRUG00000015265	cmss1	100	60.135	Takifugu_rubripes
ENSPNAG00000007912	cmss1	69	62.562	ENSTNIG00000002880	cmss1	95	57.736	Tetraodon_nigroviridis
ENSPNAG00000007912	cmss1	100	34.354	ENSTBEG00000016722	CMSS1	100	34.694	Tupaia_belangeri
ENSPNAG00000007912	cmss1	100	49.832	ENSTTRG00000001562	CMSS1	100	49.158	Tursiops_truncatus
ENSPNAG00000007912	cmss1	82	53.498	ENSUAMG00000024209	CMSS1	95	54.113	Ursus_americanus
ENSPNAG00000007912	cmss1	82	53.086	ENSUMAG00000001983	CMSS1	92	53.086	Ursus_maritimus
ENSPNAG00000007912	cmss1	100	38.435	ENSVPAG00000000263	CMSS1	57	56.875	Vicugna_pacos
ENSPNAG00000007912	cmss1	69	56.436	ENSVVUG00000007776	-	80	56.436	Vulpes_vulpes
ENSPNAG00000007912	cmss1	82	54.733	ENSVVUG00000021647	-	97	53.498	Vulpes_vulpes
ENSPNAG00000007912	cmss1	100	53.378	ENSXETG00000011858	cmss1	100	53.378	Xenopus_tropicalis
ENSPNAG00000007912	cmss1	71	67.788	ENSXCOG00000018724	cmss1	90	58.935	Xiphophorus_couchianus
ENSPNAG00000007912	cmss1	71	67.788	ENSXMAG00000011243	cmss1	99	58.935	Xiphophorus_maculatus