EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000007940 (Gene tree)
Gene ID: 108434353
Gene Symbol: rbm47
Alias: si:ch211-241e15.2|wu:fj94a03
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 50684 bases
Position: chrKV575440.1:1653757-1704440
Accession: 108434353
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000001070	RRM_1	PF00076.22	3.6e-40	1	3
ENSPNAP00000001070	RRM_1	PF00076.22	3.6e-40	2	3
ENSPNAP00000001070	RRM_1	PF00076.22	3.6e-40	3	3
ENSPNAP00000023383	RRM_1	PF00076.22	3.6e-40	1	3
ENSPNAP00000023383	RRM_1	PF00076.22	3.6e-40	2	3
ENSPNAP00000023383	RRM_1	PF00076.22	3.6e-40	3	3
ENSPNAP00000023385	RRM_1	PF00076.22	3.6e-40	1	3
ENSPNAP00000023385	RRM_1	PF00076.22	3.6e-40	2	3
ENSPNAP00000023385	RRM_1	PF00076.22	3.6e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000012775	-	6694	XM_017709422	ENSPNAP00000001070	600 (aa)	XP_017564911	UPI00081424DF
ENSPNAT00000012781	-	6852	XM_017709425	ENSPNAP00000023385	600 (aa)	XP_017564914	UPI00081424DF
ENSPNAT00000012771	-	6588	XM_017709423	ENSPNAP00000023383	600 (aa)	XP_017564912	UPI00081424DF

Gene Model

Click here to download ENSPNAG00000007940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000007940's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000007940	rbm47	50	53.156	ENSPNAG00000024259	syncrip	68	44.138
ENSPNAG00000007940	rbm47	54	65.635	ENSPNAG00000025312	rbm46	62	66.873
ENSPNAG00000007940	rbm47	51	54.545	ENSPNAG00000022865	hnrnpr	75	45.255
ENSPNAG00000007940	rbm47	53	51.411	ENSPNAG00000000907	syncripl	70	46.096
ENSPNAG00000007940	rbm47	90	51.590	ENSPNAG00000007704	a1cf	90	52.321

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000007940	rbm47	95	84.637	ENSG00000163694	RBM47	100	81.223	Homo_sapiens
ENSPNAG00000007940	rbm47	100	87.980	ENSAPOG00000011062	rbm47	100	86.701	Acanthochromis_polyacanthus
ENSPNAG00000007940	rbm47	95	76.158	ENSAMEG00000009672	RBM47	100	75.122	Ailuropoda_melanoleuca
ENSPNAG00000007940	rbm47	100	83.279	ENSACIG00000011531	rbm47	100	83.770	Amphilophus_citrinellus
ENSPNAG00000007940	rbm47	100	87.500	ENSAOCG00000022245	rbm47	100	86.957	Amphiprion_ocellaris
ENSPNAG00000007940	rbm47	100	87.500	ENSAPEG00000018304	rbm47	99	86.957	Amphiprion_percula
ENSPNAG00000007940	rbm47	100	84.615	ENSATEG00000018400	rbm47	100	83.797	Anabas_testudineus
ENSPNAG00000007940	rbm47	100	75.614	ENSAPLG00000013974	RBM47	100	74.304	Anas_platyrhynchos
ENSPNAG00000007940	rbm47	100	75.689	ENSACAG00000011833	RBM47	96	77.740	Anolis_carolinensis
ENSPNAG00000007940	rbm47	100	80.256	ENSANAG00000029440	RBM47	98	80.201	Aotus_nancymaae
ENSPNAG00000007940	rbm47	100	88.175	ENSACLG00000016902	rbm47	100	88.175	Astatotilapia_calliptera
ENSPNAG00000007940	rbm47	100	91.225	ENSAMXG00000021794	rbm47	100	91.060	Astyanax_mexicanus
ENSPNAG00000007940	rbm47	100	76.026	ENSBTAG00000002356	RBM47	100	76.683	Bos_taurus
ENSPNAG00000007940	rbm47	96	83.747	ENSCJAG00000019385	RBM47	98	80.201	Callithrix_jacchus
ENSPNAG00000007940	rbm47	94	77.778	ENSCAFG00000015898	RBM47	100	76.066	Canis_familiaris
ENSPNAG00000007940	rbm47	81	83.427	ENSCAFG00020010558	RBM47	91	76.281	Canis_lupus_dingo
ENSPNAG00000007940	rbm47	100	75.862	ENSCHIG00000026214	RBM47	100	76.519	Capra_hircus
ENSPNAG00000007940	rbm47	84	89.041	ENSTSYG00000033612	RBM47	93	89.041	Carlito_syrichta
ENSPNAG00000007940	rbm47	100	73.008	ENSCAPG00000008426	RBM47	100	70.000	Cavia_aperea
ENSPNAG00000007940	rbm47	100	80.256	ENSCPOG00000014100	RBM47	100	75.286	Cavia_porcellus
ENSPNAG00000007940	rbm47	100	81.748	ENSCCAG00000030129	-	98	80.250	Cebus_capucinus
ENSPNAG00000007940	rbm47	99	53.146	ENSCCAG00000024397	-	99	51.980	Cebus_capucinus
ENSPNAG00000007940	rbm47	95	84.637	ENSCATG00000042064	RBM47	100	76.771	Cercocebus_atys
ENSPNAG00000007940	rbm47	95	83.799	ENSCLAG00000001684	RBM47	100	75.882	Chinchilla_lanigera
ENSPNAG00000007940	rbm47	95	77.797	ENSCSAG00000017060	RBM47	100	75.856	Chlorocebus_sabaeus
ENSPNAG00000007940	rbm47	84	77.594	ENSCHOG00000011731	RBM47	88	75.000	Choloepus_hoffmanni
ENSPNAG00000007940	rbm47	100	77.814	ENSCPBG00000013831	RBM47	100	76.998	Chrysemys_picta_bellii
ENSPNAG00000007940	rbm47	95	84.916	ENSCANG00000019997	RBM47	100	76.936	Colobus_angolensis_palliatus
ENSPNAG00000007940	rbm47	100	80.928	ENSCGRG00001000623	-	100	74.593	Cricetulus_griseus_chok1gshd
ENSPNAG00000007940	rbm47	100	76.093	ENSCGRG00001020102	-	100	63.333	Cricetulus_griseus_chok1gshd
ENSPNAG00000007940	rbm47	100	73.779	ENSCGRG00000007762	-	100	76.471	Cricetulus_griseus_crigri
ENSPNAG00000007940	rbm47	99	76.579	ENSCGRG00000014760	-	97	65.385	Cricetulus_griseus_crigri
ENSPNAG00000007940	rbm47	95	83.391	ENSCSEG00000004545	rbm47	100	81.015	Cynoglossus_semilaevis
ENSPNAG00000007940	rbm47	100	83.252	ENSCVAG00000020144	rbm47	100	86.189	Cyprinodon_variegatus
ENSPNAG00000007940	rbm47	100	89.570	ENSDARG00000061985	rbm47	100	89.404	Danio_rerio
ENSPNAG00000007940	rbm47	95	78.883	ENSDNOG00000046854	RBM47	100	77.355	Dasypus_novemcinctus
ENSPNAG00000007940	rbm47	100	75.610	ENSDORG00000010144	Rbm47	100	75.610	Dipodomys_ordii
ENSPNAG00000007940	rbm47	95	77.702	ENSETEG00000009194	RBM47	100	75.856	Echinops_telfairi
ENSPNAG00000007940	rbm47	93	60.659	ENSEBUG00000011912	rbm47	95	60.733	Eptatretus_burgeri
ENSPNAG00000007940	rbm47	95	78.163	ENSEASG00005008443	RBM47	100	76.355	Equus_asinus_asinus
ENSPNAG00000007940	rbm47	95	78.163	ENSECAG00000004400	RBM47	100	76.355	Equus_caballus
ENSPNAG00000007940	rbm47	70	87.619	ENSEEUG00000001194	RBM47	75	81.405	Erinaceus_europaeus
ENSPNAG00000007940	rbm47	100	79.187	ENSELUG00000006148	rbm47	100	85.354	Esox_lucius
ENSPNAG00000007940	rbm47	95	78.819	ENSFCAG00000012399	RBM47	100	76.974	Felis_catus
ENSPNAG00000007940	rbm47	100	77.451	ENSFALG00000002861	RBM47	100	76.634	Ficedula_albicollis
ENSPNAG00000007940	rbm47	100	79.124	ENSFDAG00000016326	RBM47	100	74.877	Fukomys_damarensis
ENSPNAG00000007940	rbm47	100	83.059	ENSFHEG00000007938	rbm47	100	82.237	Fundulus_heteroclitus
ENSPNAG00000007940	rbm47	100	79.321	ENSGMOG00000014802	rbm47	100	78.871	Gadus_morhua
ENSPNAG00000007940	rbm47	65	82.474	ENSGALG00000014267	RBM47	99	81.701	Gallus_gallus
ENSPNAG00000007940	rbm47	65	85.013	ENSGAFG00000020571	rbm47	98	84.794	Gambusia_affinis
ENSPNAG00000007940	rbm47	100	81.403	ENSGACG00000016223	rbm47	100	84.439	Gasterosteus_aculeatus
ENSPNAG00000007940	rbm47	100	77.814	ENSGAGG00000020051	RBM47	100	76.998	Gopherus_agassizii
ENSPNAG00000007940	rbm47	95	84.637	ENSGGOG00000001367	RBM47	100	76.771	Gorilla_gorilla
ENSPNAG00000007940	rbm47	100	88.175	ENSHBUG00000003520	rbm47	100	83.333	Haplochromis_burtoni
ENSPNAG00000007940	rbm47	84	62.113	ENSHGLG00000016914	RBM47	100	75.882	Heterocephalus_glaber_female
ENSPNAG00000007940	rbm47	100	66.995	ENSHGLG00100003071	-	100	66.939	Heterocephalus_glaber_male
ENSPNAG00000007940	rbm47	100	79.897	ENSHGLG00100014028	-	100	75.882	Heterocephalus_glaber_male
ENSPNAG00000007940	rbm47	99	81.518	ENSHCOG00000002074	rbm47	99	82.043	Hippocampus_comes
ENSPNAG00000007940	rbm47	100	90.563	ENSIPUG00000004743	rbm47	100	90.563	Ictalurus_punctatus
ENSPNAG00000007940	rbm47	95	84.358	ENSSTOG00000004727	RBM47	100	75.244	Ictidomys_tridecemlineatus
ENSPNAG00000007940	rbm47	95	77.797	ENSJJAG00000013823	Rbm47	100	75.367	Jaculus_jaculus
ENSPNAG00000007940	rbm47	100	84.262	ENSKMAG00000000084	rbm47	100	86.701	Kryptolebias_marmoratus
ENSPNAG00000007940	rbm47	100	87.212	ENSLBEG00000008436	rbm47	99	85.934	Labrus_bergylta
ENSPNAG00000007940	rbm47	100	77.087	ENSLACG00000007196	RBM47	100	75.738	Latimeria_chalumnae
ENSPNAG00000007940	rbm47	95	85.540	ENSLOCG00000012966	rbm47	95	82.208	Lepisosteus_oculatus
ENSPNAG00000007940	rbm47	100	75.163	ENSLAFG00000011998	RBM47	100	75.327	Loxodonta_africana
ENSPNAG00000007940	rbm47	95	84.637	ENSMFAG00000037967	RBM47	100	76.771	Macaca_fascicularis
ENSPNAG00000007940	rbm47	95	77.797	ENSMMUG00000012036	RBM47	100	79.024	Macaca_mulatta
ENSPNAG00000007940	rbm47	95	84.637	ENSMNEG00000040774	RBM47	100	76.645	Macaca_nemestrina
ENSPNAG00000007940	rbm47	95	87.458	ENSMLEG00000041432	RBM47	100	82.875	Mandrillus_leucophaeus
ENSPNAG00000007940	rbm47	100	85.621	ENSMAMG00000019143	rbm47	99	88.235	Mastacembelus_armatus
ENSPNAG00000007940	rbm47	100	88.175	ENSMZEG00005023659	rbm47	100	88.175	Maylandia_zebra
ENSPNAG00000007940	rbm47	100	77.073	ENSMGAG00000012226	RBM47	100	76.098	Meleagris_gallopavo
ENSPNAG00000007940	rbm47	100	80.720	ENSMAUG00000006493	Rbm47	100	77.059	Mesocricetus_auratus
ENSPNAG00000007940	rbm47	94	82.535	ENSMICG00000026417	RBM47	96	78.634	Microcebus_murinus
ENSPNAG00000007940	rbm47	100	80.670	ENSMOCG00000021170	Rbm47	100	76.471	Microtus_ochrogaster
ENSPNAG00000007940	rbm47	100	84.426	ENSMMOG00000007260	rbm47	100	83.443	Mola_mola
ENSPNAG00000007940	rbm47	100	77.250	ENSMODG00000007003	RBM47	100	76.432	Monodelphis_domestica
ENSPNAG00000007940	rbm47	100	72.652	ENSMODG00000020561	-	96	75.916	Monodelphis_domestica
ENSPNAG00000007940	rbm47	52	77.603	ENSMODG00000015426	-	99	77.603	Monodelphis_domestica
ENSPNAG00000007940	rbm47	100	84.072	ENSMALG00000005167	rbm47	100	86.632	Monopterus_albus
ENSPNAG00000007940	rbm47	100	80.928	MGP_CAROLIEiJ_G0027258	Rbm47	100	77.059	Mus_caroli
ENSPNAG00000007940	rbm47	100	80.928	ENSMUSG00000070780	Rbm47	100	77.059	Mus_musculus
ENSPNAG00000007940	rbm47	100	80.928	MGP_PahariEiJ_G0017040	Rbm47	100	77.059	Mus_pahari
ENSPNAG00000007940	rbm47	100	80.928	MGP_SPRETEiJ_G0028253	Rbm47	100	77.059	Mus_spretus
ENSPNAG00000007940	rbm47	95	77.241	ENSMPUG00000006177	RBM47	94	75.327	Mustela_putorius_furo
ENSPNAG00000007940	rbm47	100	76.190	ENSMLUG00000000889	RBM47	100	75.862	Myotis_lucifugus
ENSPNAG00000007940	rbm47	100	75.204	ENSNGAG00000003325	Rbm47	100	75.041	Nannospalax_galili
ENSPNAG00000007940	rbm47	100	82.982	ENSNBRG00000015092	rbm47	100	83.468	Neolamprologus_brichardi
ENSPNAG00000007940	rbm47	95	84.637	ENSNLEG00000017151	RBM47	100	76.442	Nomascus_leucogenys
ENSPNAG00000007940	rbm47	71	80.000	ENSMEUG00000009516	-	99	80.189	Notamacropus_eugenii
ENSPNAG00000007940	rbm47	76	85.124	ENSOPRG00000016507	-	75	85.124	Ochotona_princeps
ENSPNAG00000007940	rbm47	95	76.817	ENSODEG00000004873	RBM47	100	75.410	Octodon_degus
ENSPNAG00000007940	rbm47	100	84.365	ENSONIG00000009061	rbm47	100	83.388	Oreochromis_niloticus
ENSPNAG00000007940	rbm47	100	77.063	ENSOANG00000008978	RBM47	100	75.908	Ornithorhynchus_anatinus
ENSPNAG00000007940	rbm47	100	76.026	ENSOCUG00000012034	RBM47	100	76.098	Oryctolagus_cuniculus
ENSPNAG00000007940	rbm47	100	82.401	ENSORLG00000005847	rbm47	100	86.598	Oryzias_latipes
ENSPNAG00000007940	rbm47	100	82.401	ENSORLG00020005154	rbm47	100	86.598	Oryzias_latipes_hni
ENSPNAG00000007940	rbm47	100	86.154	ENSORLG00015000066	rbm47	100	82.759	Oryzias_latipes_hsok
ENSPNAG00000007940	rbm47	100	84.401	ENSOMEG00000010730	rbm47	100	83.580	Oryzias_melastigma
ENSPNAG00000007940	rbm47	95	72.049	ENSOGAG00000025193	-	100	71.217	Otolemur_garnettii
ENSPNAG00000007940	rbm47	95	77.759	ENSOGAG00000029367	-	100	75.490	Otolemur_garnettii
ENSPNAG00000007940	rbm47	100	67.816	ENSOARG00000012711	RBM47	100	68.801	Ovis_aries
ENSPNAG00000007940	rbm47	95	78.609	ENSPPAG00000029763	RBM47	100	76.771	Pan_paniscus
ENSPNAG00000007940	rbm47	95	83.889	ENSPPRG00000012873	RBM47	99	80.928	Panthera_pardus
ENSPNAG00000007940	rbm47	83	75.794	ENSPTIG00000017046	RBM47	100	76.389	Panthera_tigris_altaica
ENSPNAG00000007940	rbm47	95	84.637	ENSPTRG00000016006	RBM47	100	76.771	Pan_troglodytes
ENSPNAG00000007940	rbm47	95	84.637	ENSPANG00000005980	RBM47	100	76.771	Papio_anubis
ENSPNAG00000007940	rbm47	95	78.435	ENSPKIG00000013431	RBM47	100	74.465	Paramormyrops_kingsleyae
ENSPNAG00000007940	rbm47	95	89.916	ENSPKIG00000005037	rbm47	100	80.033	Paramormyrops_kingsleyae
ENSPNAG00000007940	rbm47	89	78.598	ENSPSIG00000017516	RBM47	97	78.044	Pelodiscus_sinensis
ENSPNAG00000007940	rbm47	94	83.595	ENSPMGG00000018540	rbm47	100	80.921	Periophthalmus_magnuspinnatus
ENSPNAG00000007940	rbm47	100	80.412	ENSPEMG00000011088	Rbm47	100	75.041	Peromyscus_maniculatus_bairdii
ENSPNAG00000007940	rbm47	100	82.229	ENSPFOG00000007997	rbm47	100	81.230	Poecilia_formosa
ENSPNAG00000007940	rbm47	100	82.362	ENSPLAG00000002072	rbm47	100	85.013	Poecilia_latipinna
ENSPNAG00000007940	rbm47	100	81.922	ENSPMEG00000017492	rbm47	100	85.678	Poecilia_mexicana
ENSPNAG00000007940	rbm47	100	82.686	ENSPREG00000008456	rbm47	100	85.934	Poecilia_reticulata
ENSPNAG00000007940	rbm47	96	67.851	ENSPPYG00000014688	RBM47	99	66.836	Pongo_abelii
ENSPNAG00000007940	rbm47	83	79.903	ENSPCAG00000011879	RBM47	81	80.630	Procavia_capensis
ENSPNAG00000007940	rbm47	94	83.146	ENSPCOG00000023451	RBM47	100	75.164	Propithecus_coquereli
ENSPNAG00000007940	rbm47	95	78.621	ENSPVAG00000003812	RBM47	100	75.654	Pteropus_vampyrus
ENSPNAG00000007940	rbm47	100	82.714	ENSPNYG00000022868	rbm47	100	83.199	Pundamilia_nyererei
ENSPNAG00000007940	rbm47	100	75.123	ENSRNOG00000002408	Rbm47	100	75.777	Rattus_norvegicus
ENSPNAG00000007940	rbm47	95	84.958	ENSRBIG00000039601	RBM47	100	76.974	Rhinopithecus_bieti
ENSPNAG00000007940	rbm47	95	84.958	ENSRROG00000044696	RBM47	100	76.974	Rhinopithecus_roxellana
ENSPNAG00000007940	rbm47	100	74.043	ENSSBOG00000028475	RBM47	100	77.555	Saimiri_boliviensis_boliviensis
ENSPNAG00000007940	rbm47	100	77.340	ENSSHAG00000017576	RBM47	100	77.011	Sarcophilus_harrisii
ENSPNAG00000007940	rbm47	98	79.530	ENSSFOG00015024101	RBM47	97	81.217	Scleropages_formosus
ENSPNAG00000007940	rbm47	94	86.632	ENSSFOG00015012445	rbm47	100	80.298	Scleropages_formosus
ENSPNAG00000007940	rbm47	100	86.375	ENSSMAG00000009744	rbm47	100	85.604	Scophthalmus_maximus
ENSPNAG00000007940	rbm47	100	85.413	ENSSDUG00000022684	rbm47	97	87.002	Seriola_dumerili
ENSPNAG00000007940	rbm47	100	87.089	ENSSLDG00000003109	rbm47	100	86.582	Seriola_lalandi_dorsalis
ENSPNAG00000007940	rbm47	86	78.913	ENSSARG00000001735	RBM47	75	79.130	Sorex_araneus
ENSPNAG00000007940	rbm47	100	81.074	ENSSPUG00000007515	RBM47	100	81.026	Sphenodon_punctatus
ENSPNAG00000007940	rbm47	100	87.980	ENSSPAG00000001257	rbm47	100	87.212	Stegastes_partitus
ENSPNAG00000007940	rbm47	95	78.683	ENSSSCG00000008796	RBM47	100	76.683	Sus_scrofa
ENSPNAG00000007940	rbm47	100	77.250	ENSTGUG00000008705	RBM47	100	76.432	Taeniopygia_guttata
ENSPNAG00000007940	rbm47	95	85.243	ENSTRUG00000014050	rbm47	98	84.896	Takifugu_rubripes
ENSPNAG00000007940	rbm47	100	83.580	ENSTNIG00000006127	rbm47	100	83.251	Tetraodon_nigroviridis
ENSPNAG00000007940	rbm47	73	83.989	ENSTBEG00000001607	RBM47	76	79.381	Tupaia_belangeri
ENSPNAG00000007940	rbm47	95	78.609	ENSTTRG00000002839	RBM47	100	76.442	Tursiops_truncatus
ENSPNAG00000007940	rbm47	95	77.414	ENSUAMG00000021346	RBM47	100	75.817	Ursus_americanus
ENSPNAG00000007940	rbm47	52	83.333	ENSVPAG00000000641	-	56	73.885	Vicugna_pacos
ENSPNAG00000007940	rbm47	94	78.261	ENSVVUG00000014774	RBM47	100	76.355	Vulpes_vulpes
ENSPNAG00000007940	rbm47	100	76.432	ENSXETG00000012802	rbm47	100	76.596	Xenopus_tropicalis
ENSPNAG00000007940	rbm47	89	85.013	ENSXCOG00000000780	rbm47	100	85.013	Xiphophorus_couchianus
ENSPNAG00000007940	rbm47	100	82.792	ENSXMAG00000009874	rbm47	100	85.934	Xiphophorus_maculatus