EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000008072 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: la-related protein 6-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 1611 bases
Position: chrKV575309.1:5042183-5043793
Accession: 108424422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000001289	La	PF05383.17	3.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000012427	-	1275	XM_017692462	ENSPNAP00000001289	424 (aa)	XP_017547951	-

Gene Model

Click here to download ENSPNAG00000008072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000008072's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000008072	-	90	41.163	ENSPNAG00000017966	larp6a	69	38.534
ENSPNAG00000008072	-	92	37.385	ENSPNAG00000023854	larp6b	89	34.821

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000008072	-	89	41.750	ENSAPLG00000004633	-	51	55.288	Anas_platyrhynchos
ENSPNAG00000008072	-	89	39.709	ENSACAG00000016739	-	99	38.795	Anolis_carolinensis
ENSPNAG00000008072	-	93	43.765	ENSCPBG00000011144	-	91	42.723	Chrysemys_picta_bellii
ENSPNAG00000008072	-	93	60.741	ENSELUG00000018609	-	90	60.741	Esox_lucius
ENSPNAG00000008072	-	94	43.794	ENSGAGG00000005511	-	97	41.995	Gopherus_agassizii
ENSPNAG00000008072	-	91	42.619	ENSLACG00000014893	-	85	42.271	Latimeria_chalumnae
ENSPNAG00000008072	-	57	41.532	ENSPCIG00000009484	-	60	44.144	Phascolarctos_cinereus
ENSPNAG00000008072	-	94	44.393	ENSXETG00000021887	larp6-like.1	88	43.224	Xenopus_tropicalis