EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000008260 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 1734 bases
Position: chrKV575547.1:137397-139130
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000023742	zf-CCHC	PF00098.23	0.00034	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000011866	-	1734	-	ENSPNAP00000023742	577 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000008260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000008260's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000008260	-	60	58.571	ENSPNAG00000005461	-	65	58.571
ENSPNAG00000008260	-	60	49.162	ENSPNAG00000011953	-	69	49.721
ENSPNAG00000008260	-	60	53.143	ENSPNAG00000021284	-	64	53.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000008260	-	51	36.656	ENSACIG00000020644	-	90	37.209	Amphilophus_citrinellus
ENSPNAG00000008260	-	65	43.523	ENSAOCG00000006827	-	65	42.674	Amphiprion_ocellaris
ENSPNAG00000008260	-	58	32.754	ENSAOCG00000003063	-	64	32.754	Amphiprion_ocellaris
ENSPNAG00000008260	-	58	30.409	ENSAOCG00000022423	-	58	30.409	Amphiprion_ocellaris
ENSPNAG00000008260	-	58	30.117	ENSAOCG00000006786	-	58	30.117	Amphiprion_ocellaris
ENSPNAG00000008260	-	65	43.523	ENSAOCG00000006321	-	65	42.674	Amphiprion_ocellaris
ENSPNAG00000008260	-	58	30.409	ENSAOCG00000007145	-	58	30.409	Amphiprion_ocellaris
ENSPNAG00000008260	-	51	54.359	ENSAPEG00000022462	-	66	54.359	Amphiprion_percula
ENSPNAG00000008260	-	58	32.764	ENSACLG00000021840	-	64	32.764	Astatotilapia_calliptera
ENSPNAG00000008260	-	58	32.764	ENSACLG00000003667	-	65	32.764	Astatotilapia_calliptera
ENSPNAG00000008260	-	58	32.764	ENSACLG00000001645	-	63	32.764	Astatotilapia_calliptera
ENSPNAG00000008260	-	99	43.074	ENSAMXG00000043621	-	76	43.074	Astyanax_mexicanus
ENSPNAG00000008260	-	72	42.494	ENSFHEG00000016127	-	75	42.263	Fundulus_heteroclitus
ENSPNAG00000008260	-	95	45.565	ENSGAFG00000002139	-	78	47.611	Gambusia_affinis
ENSPNAG00000008260	-	58	33.236	ENSMZEG00005020406	-	64	33.236	Maylandia_zebra
ENSPNAG00000008260	-	61	36.313	ENSMZEG00005008163	-	65	36.313	Maylandia_zebra
ENSPNAG00000008260	-	75	44.118	ENSPFOG00000023145	-	74	46.171	Poecilia_formosa
ENSPNAG00000008260	-	58	33.811	ENSSFOG00015018996	-	84	33.811	Scleropages_formosus
ENSPNAG00000008260	-	58	30.994	ENSSLDG00000012064	-	62	30.994	Seriola_lalandi_dorsalis
ENSPNAG00000008260	-	58	33.918	ENSSPAG00000003097	-	64	33.918	Stegastes_partitus