EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000008288 (Gene tree)
Gene ID: 108432584
Gene Symbol: sf3b1
Alias: tst|wu:fb99f09
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 13535 bases
Position: chrKV575407.1:190151-203685
Accession: 108432584
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000001630	SF3b1	PF08920.10	8.9e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000011824	-	4881	XM_017706530	ENSPNAP00000001630	1315 (aa)	XP_017562019	UPI0008147153

Gene Model

Click here to download ENSPNAG00000008288's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000008288's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000008288	sf3b1	100	93.997	ENSG00000115524	SF3B1	100	93.997	Homo_sapiens
ENSPNAG00000008288	sf3b1	100	96.884	ENSAPOG00000011894	sf3b1	100	96.884	Acanthochromis_polyacanthus
ENSPNAG00000008288	sf3b1	99	93.884	ENSAMEG00000013809	SF3B1	99	93.884	Ailuropoda_melanoleuca
ENSPNAG00000008288	sf3b1	100	95.821	ENSACIG00000020910	sf3b1	97	95.821	Amphilophus_citrinellus
ENSPNAG00000008288	sf3b1	100	96.884	ENSAOCG00000004478	sf3b1	100	96.884	Amphiprion_ocellaris
ENSPNAG00000008288	sf3b1	100	96.884	ENSAPEG00000012937	sf3b1	100	96.884	Amphiprion_percula
ENSPNAG00000008288	sf3b1	100	97.112	ENSATEG00000020435	sf3b1	100	97.112	Anabas_testudineus
ENSPNAG00000008288	sf3b1	99	94.104	ENSAPLG00000003993	SF3B1	99	94.028	Anas_platyrhynchos
ENSPNAG00000008288	sf3b1	100	93.916	ENSACAG00000009612	SF3B1	100	93.840	Anolis_carolinensis
ENSPNAG00000008288	sf3b1	100	93.997	ENSANAG00000021577	SF3B1	100	95.291	Aotus_nancymaae
ENSPNAG00000008288	sf3b1	100	95.897	ENSACLG00000023470	sf3b1	100	95.897	Astatotilapia_calliptera
ENSPNAG00000008288	sf3b1	100	98.859	ENSAMXG00000002219	sf3b1	100	98.859	Astyanax_mexicanus
ENSPNAG00000008288	sf3b1	100	93.997	ENSBTAG00000008915	SF3B1	100	93.997	Bos_taurus
ENSPNAG00000008288	sf3b1	98	65.318	WBGene00011605	sftb-1	97	65.318	Caenorhabditis_elegans
ENSPNAG00000008288	sf3b1	100	93.997	ENSCJAG00000003902	SF3B1	100	93.997	Callithrix_jacchus
ENSPNAG00000008288	sf3b1	100	93.997	ENSCAFG00000010826	SF3B1	100	93.997	Canis_familiaris
ENSPNAG00000008288	sf3b1	100	93.997	ENSCAFG00020004750	SF3B1	100	93.997	Canis_lupus_dingo
ENSPNAG00000008288	sf3b1	100	93.997	ENSCHIG00000015226	SF3B1	100	93.997	Capra_hircus
ENSPNAG00000008288	sf3b1	100	93.921	ENSTSYG00000009214	SF3B1	100	93.921	Carlito_syrichta
ENSPNAG00000008288	sf3b1	99	93.826	ENSCAPG00000006547	SF3B1	99	93.826	Cavia_aperea
ENSPNAG00000008288	sf3b1	99	93.951	ENSCPOG00000009353	SF3B1	100	93.951	Cavia_porcellus
ENSPNAG00000008288	sf3b1	100	93.997	ENSCCAG00000020506	SF3B1	100	93.997	Cebus_capucinus
ENSPNAG00000008288	sf3b1	100	93.997	ENSCATG00000035735	SF3B1	100	93.997	Cercocebus_atys
ENSPNAG00000008288	sf3b1	99	93.956	ENSCLAG00000014767	SF3B1	99	93.956	Chinchilla_lanigera
ENSPNAG00000008288	sf3b1	100	93.997	ENSCSAG00000011505	SF3B1	100	93.997	Chlorocebus_sabaeus
ENSPNAG00000008288	sf3b1	76	92.816	ENSCHOG00000009860	SF3B1	76	92.816	Choloepus_hoffmanni
ENSPNAG00000008288	sf3b1	100	94.068	ENSCPBG00000021902	SF3B1	100	94.068	Chrysemys_picta_bellii
ENSPNAG00000008288	sf3b1	69	78.190	ENSCING00000002558	-	99	78.674	Ciona_intestinalis
ENSPNAG00000008288	sf3b1	99	79.850	ENSCSAVG00000002559	-	99	79.850	Ciona_savignyi
ENSPNAG00000008288	sf3b1	100	93.997	ENSCANG00000029415	SF3B1	100	93.997	Colobus_angolensis_palliatus
ENSPNAG00000008288	sf3b1	100	93.997	ENSCGRG00001016990	Sf3b1	100	93.997	Cricetulus_griseus_chok1gshd
ENSPNAG00000008288	sf3b1	100	93.997	ENSCGRG00000005301	Sf3b1	100	93.997	Cricetulus_griseus_crigri
ENSPNAG00000008288	sf3b1	100	92.477	ENSCSEG00000003860	sf3b1	100	92.477	Cynoglossus_semilaevis
ENSPNAG00000008288	sf3b1	96	97.075	ENSCVAG00000003680	sf3b1	99	97.075	Cyprinodon_variegatus
ENSPNAG00000008288	sf3b1	100	97.267	ENSDARG00000056138	sf3b1	100	97.267	Danio_rerio
ENSPNAG00000008288	sf3b1	100	93.926	ENSDNOG00000011754	SF3B1	100	93.926	Dasypus_novemcinctus
ENSPNAG00000008288	sf3b1	99	91.960	ENSDORG00000002399	Sf3b1	100	91.807	Dipodomys_ordii
ENSPNAG00000008288	sf3b1	100	75.953	FBgn0031266	Sf3b1	100	75.953	Drosophila_melanogaster
ENSPNAG00000008288	sf3b1	83	92.844	ENSETEG00000009188	SF3B1	100	92.844	Echinops_telfairi
ENSPNAG00000008288	sf3b1	99	85.823	ENSEBUG00000004325	sf3b1	100	88.812	Eptatretus_burgeri
ENSPNAG00000008288	sf3b1	100	93.997	ENSEASG00005020159	SF3B1	98	93.997	Equus_asinus_asinus
ENSPNAG00000008288	sf3b1	100	93.997	ENSECAG00000021657	SF3B1	98	93.997	Equus_caballus
ENSPNAG00000008288	sf3b1	87	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSPNAG00000008288	sf3b1	100	96.224	ENSELUG00000005977	sf3b1	98	96.224	Esox_lucius
ENSPNAG00000008288	sf3b1	100	93.997	ENSFCAG00000005038	SF3B1	100	93.997	Felis_catus
ENSPNAG00000008288	sf3b1	99	94.028	ENSFALG00000004281	SF3B1	99	93.951	Ficedula_albicollis
ENSPNAG00000008288	sf3b1	100	93.997	ENSFDAG00000017510	SF3B1	100	93.997	Fukomys_damarensis
ENSPNAG00000008288	sf3b1	100	96.052	ENSFHEG00000014333	sf3b1	100	95.976	Fundulus_heteroclitus
ENSPNAG00000008288	sf3b1	100	95.603	ENSGMOG00000006773	sf3b1	100	95.754	Gadus_morhua
ENSPNAG00000008288	sf3b1	100	94.144	ENSGALG00000008038	SF3B1	100	94.068	Gallus_gallus
ENSPNAG00000008288	sf3b1	98	96.916	ENSGAFG00000000704	sf3b1	100	96.916	Gambusia_affinis
ENSPNAG00000008288	sf3b1	100	95.292	ENSGACG00000008839	sf3b1	100	95.520	Gasterosteus_aculeatus
ENSPNAG00000008288	sf3b1	100	93.429	ENSGAGG00000017478	SF3B1	100	93.429	Gopherus_agassizii
ENSPNAG00000008288	sf3b1	99	88.761	ENSGGOG00000009264	SF3B1	99	88.761	Gorilla_gorilla
ENSPNAG00000008288	sf3b1	99	95.967	ENSHBUG00000007705	sf3b1	99	95.967	Haplochromis_burtoni
ENSPNAG00000008288	sf3b1	99	93.956	ENSHGLG00000008285	-	99	93.956	Heterocephalus_glaber_female
ENSPNAG00000008288	sf3b1	99	91.966	ENSHGLG00100005535	-	99	91.966	Heterocephalus_glaber_male
ENSPNAG00000008288	sf3b1	100	95.767	ENSHCOG00000016775	sf3b1	100	95.692	Hippocampus_comes
ENSPNAG00000008288	sf3b1	100	97.871	ENSIPUG00000013171	sf3b1	100	97.871	Ictalurus_punctatus
ENSPNAG00000008288	sf3b1	100	93.997	ENSSTOG00000011034	SF3B1	100	93.997	Ictidomys_tridecemlineatus
ENSPNAG00000008288	sf3b1	99	93.932	ENSJJAG00000010903	Sf3b1	99	93.932	Jaculus_jaculus
ENSPNAG00000008288	sf3b1	100	96.133	ENSKMAG00000004009	sf3b1	100	96.133	Kryptolebias_marmoratus
ENSPNAG00000008288	sf3b1	100	95.973	ENSLBEG00000022208	sf3b1	100	95.973	Labrus_bergylta
ENSPNAG00000008288	sf3b1	99	90.798	ENSLACG00000014832	SF3B1	99	90.798	Latimeria_chalumnae
ENSPNAG00000008288	sf3b1	100	95.764	ENSLOCG00000003899	sf3b1	100	95.764	Lepisosteus_oculatus
ENSPNAG00000008288	sf3b1	100	93.997	ENSLAFG00000001956	SF3B1	100	93.997	Loxodonta_africana
ENSPNAG00000008288	sf3b1	99	93.956	ENSMMUG00000022430	SF3B1	99	93.956	Macaca_mulatta
ENSPNAG00000008288	sf3b1	100	93.997	ENSMNEG00000042333	SF3B1	100	95.291	Macaca_nemestrina
ENSPNAG00000008288	sf3b1	94	88.728	ENSMLEG00000026141	SF3B1	98	89.050	Mandrillus_leucophaeus
ENSPNAG00000008288	sf3b1	100	96.809	ENSMAMG00000010241	sf3b1	100	96.809	Mastacembelus_armatus
ENSPNAG00000008288	sf3b1	100	95.897	ENSMZEG00005021254	sf3b1	100	95.897	Maylandia_zebra
ENSPNAG00000008288	sf3b1	99	93.492	ENSMGAG00000007017	SF3B1	99	93.415	Meleagris_gallopavo
ENSPNAG00000008288	sf3b1	99	89.748	ENSMAUG00000009071	Sf3b1	99	89.748	Mesocricetus_auratus
ENSPNAG00000008288	sf3b1	100	93.997	ENSMICG00000013879	SF3B1	100	93.997	Microcebus_murinus
ENSPNAG00000008288	sf3b1	99	89.679	ENSMOCG00000000455	Sf3b1	99	89.679	Microtus_ochrogaster
ENSPNAG00000008288	sf3b1	84	96.458	ENSMMOG00000000475	sf3b1	100	96.458	Mola_mola
ENSPNAG00000008288	sf3b1	100	93.465	ENSMODG00000012275	SF3B1	100	93.389	Monodelphis_domestica
ENSPNAG00000008288	sf3b1	100	96.809	ENSMALG00000017211	sf3b1	100	96.809	Monopterus_albus
ENSPNAG00000008288	sf3b1	100	93.997	MGP_CAROLIEiJ_G0014141	Sf3b1	100	93.997	Mus_caroli
ENSPNAG00000008288	sf3b1	100	93.997	ENSMUSG00000025982	Sf3b1	100	93.997	Mus_musculus
ENSPNAG00000008288	sf3b1	100	93.997	MGP_SPRETEiJ_G0014947	Sf3b1	100	93.997	Mus_spretus
ENSPNAG00000008288	sf3b1	100	93.997	ENSMPUG00000007799	SF3B1	100	93.997	Mustela_putorius_furo
ENSPNAG00000008288	sf3b1	100	92.857	ENSMLUG00000000840	SF3B1	100	92.857	Myotis_lucifugus
ENSPNAG00000008288	sf3b1	99	93.674	ENSNGAG00000021884	-	100	93.674	Nannospalax_galili
ENSPNAG00000008288	sf3b1	100	91.344	ENSNBRG00000015816	sf3b1	100	91.344	Neolamprologus_brichardi
ENSPNAG00000008288	sf3b1	100	93.997	ENSNLEG00000006861	SF3B1	100	93.997	Nomascus_leucogenys
ENSPNAG00000008288	sf3b1	69	99.717	ENSMEUG00000015848	-	66	99.717	Notamacropus_eugenii
ENSPNAG00000008288	sf3b1	100	83.435	ENSOPRG00000008596	SF3B1	100	83.435	Ochotona_princeps
ENSPNAG00000008288	sf3b1	100	93.997	ENSODEG00000011153	-	100	93.997	Octodon_degus
ENSPNAG00000008288	sf3b1	100	95.897	ENSONIG00000013758	sf3b1	100	95.897	Oreochromis_niloticus
ENSPNAG00000008288	sf3b1	82	96.494	ENSOCUG00000012722	-	96	96.494	Oryctolagus_cuniculus
ENSPNAG00000008288	sf3b1	100	95.973	ENSORLG00000020219	sf3b1	100	95.973	Oryzias_latipes
ENSPNAG00000008288	sf3b1	100	95.973	ENSORLG00020001746	sf3b1	100	95.973	Oryzias_latipes_hni
ENSPNAG00000008288	sf3b1	64	93.846	ENSORLG00015001759	sf3b1	98	93.846	Oryzias_latipes_hsok
ENSPNAG00000008288	sf3b1	100	96.279	ENSOMEG00000019231	sf3b1	100	96.279	Oryzias_melastigma
ENSPNAG00000008288	sf3b1	100	93.997	ENSOARG00000015374	SF3B1	100	93.997	Ovis_aries
ENSPNAG00000008288	sf3b1	100	93.997	ENSPPAG00000035007	SF3B1	100	93.997	Pan_paniscus
ENSPNAG00000008288	sf3b1	100	93.997	ENSPPRG00000009090	SF3B1	100	93.997	Panthera_pardus
ENSPNAG00000008288	sf3b1	100	93.997	ENSPTIG00000021557	SF3B1	100	93.997	Panthera_tigris_altaica
ENSPNAG00000008288	sf3b1	99	86.489	ENSPTRG00000012771	SF3B1	99	86.489	Pan_troglodytes
ENSPNAG00000008288	sf3b1	100	93.997	ENSPANG00000013417	SF3B1	100	93.997	Papio_anubis
ENSPNAG00000008288	sf3b1	100	96.735	ENSPKIG00000000784	sf3b1	100	96.735	Paramormyrops_kingsleyae
ENSPNAG00000008288	sf3b1	99	92.950	ENSPSIG00000017222	SF3B1	98	92.874	Pelodiscus_sinensis
ENSPNAG00000008288	sf3b1	91	96.060	ENSPMGG00000004330	sf3b1	99	96.060	Periophthalmus_magnuspinnatus
ENSPNAG00000008288	sf3b1	99	93.956	ENSPEMG00000010699	Sf3b1	100	93.956	Peromyscus_maniculatus_bairdii
ENSPNAG00000008288	sf3b1	100	89.132	ENSPMAG00000001311	sf3b1	100	89.057	Petromyzon_marinus
ENSPNAG00000008288	sf3b1	100	93.465	ENSPCIG00000010642	SF3B1	100	93.389	Phascolarctos_cinereus
ENSPNAG00000008288	sf3b1	100	96.889	ENSPFOG00000000073	sf3b1	100	96.889	Poecilia_formosa
ENSPNAG00000008288	sf3b1	100	96.887	ENSPLAG00000002293	sf3b1	100	96.887	Poecilia_latipinna
ENSPNAG00000008288	sf3b1	100	96.963	ENSPMEG00000000446	sf3b1	98	96.963	Poecilia_mexicana
ENSPNAG00000008288	sf3b1	100	97.039	ENSPREG00000019652	sf3b1	100	97.039	Poecilia_reticulata
ENSPNAG00000008288	sf3b1	100	97.415	ENSPPYG00000013044	SF3B1	100	97.415	Pongo_abelii
ENSPNAG00000008288	sf3b1	100	93.845	ENSPCAG00000009292	SF3B1	100	93.845	Procavia_capensis
ENSPNAG00000008288	sf3b1	100	93.997	ENSPCOG00000024074	SF3B1	100	93.997	Propithecus_coquereli
ENSPNAG00000008288	sf3b1	100	93.997	ENSPVAG00000008302	SF3B1	100	93.997	Pteropus_vampyrus
ENSPNAG00000008288	sf3b1	100	95.821	ENSPNYG00000014939	sf3b1	100	95.821	Pundamilia_nyererei
ENSPNAG00000008288	sf3b1	100	93.997	ENSRNOG00000013516	Sf3b1	100	93.997	Rattus_norvegicus
ENSPNAG00000008288	sf3b1	99	90.259	ENSRBIG00000026096	SF3B1	100	90.259	Rhinopithecus_bieti
ENSPNAG00000008288	sf3b1	100	93.997	ENSRROG00000031308	SF3B1	100	93.997	Rhinopithecus_roxellana
ENSPNAG00000008288	sf3b1	100	93.997	ENSSBOG00000020080	SF3B1	100	93.997	Saimiri_boliviensis_boliviensis
ENSPNAG00000008288	sf3b1	100	93.465	ENSSHAG00000017564	SF3B1	100	93.389	Sarcophilus_harrisii
ENSPNAG00000008288	sf3b1	100	97.036	ENSSFOG00015021535	sf3b1	100	97.036	Scleropages_formosus
ENSPNAG00000008288	sf3b1	99	96.437	ENSSMAG00000013977	sf3b1	99	96.437	Scophthalmus_maximus
ENSPNAG00000008288	sf3b1	100	96.809	ENSSDUG00000017422	sf3b1	100	96.809	Seriola_dumerili
ENSPNAG00000008288	sf3b1	100	96.884	ENSSLDG00000019495	sf3b1	100	96.884	Seriola_lalandi_dorsalis
ENSPNAG00000008288	sf3b1	75	98.768	ENSSARG00000007016	SF3B1	75	98.768	Sorex_araneus
ENSPNAG00000008288	sf3b1	100	93.916	ENSSPUG00000000410	SF3B1	100	93.840	Sphenodon_punctatus
ENSPNAG00000008288	sf3b1	100	96.809	ENSSPAG00000010451	sf3b1	99	96.809	Stegastes_partitus
ENSPNAG00000008288	sf3b1	91	93.589	ENSSSCG00000016075	SF3B1	100	95.291	Sus_scrofa
ENSPNAG00000008288	sf3b1	100	94.068	ENSTGUG00000010553	SF3B1	100	93.992	Taeniopygia_guttata
ENSPNAG00000008288	sf3b1	100	96.657	ENSTRUG00000015534	sf3b1	100	96.657	Takifugu_rubripes
ENSPNAG00000008288	sf3b1	84	97.624	ENSTBEG00000008714	SF3B1	93	97.624	Tupaia_belangeri
ENSPNAG00000008288	sf3b1	92	93.300	ENSTTRG00000003414	SF3B1	92	93.300	Tursiops_truncatus
ENSPNAG00000008288	sf3b1	94	84.553	ENSUAMG00000018506	SF3B1	99	97.773	Ursus_americanus
ENSPNAG00000008288	sf3b1	100	93.997	ENSUMAG00000020945	SF3B1	100	93.997	Ursus_maritimus
ENSPNAG00000008288	sf3b1	95	93.659	ENSVPAG00000005798	SF3B1	96	93.659	Vicugna_pacos
ENSPNAG00000008288	sf3b1	100	93.997	ENSVVUG00000025948	SF3B1	95	93.997	Vulpes_vulpes
ENSPNAG00000008288	sf3b1	100	92.553	ENSXETG00000013339	sf3b1	100	92.477	Xenopus_tropicalis
ENSPNAG00000008288	sf3b1	100	91.951	ENSXCOG00000018086	sf3b1	100	92.559	Xiphophorus_couchianus
ENSPNAG00000008288	sf3b1	100	96.887	ENSXMAG00000007369	sf3b1	100	96.887	Xiphophorus_maculatus