EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000008544 (Gene tree)
Gene ID: 108428659
Gene Symbol: srp54
Alias: zgc:55842|zgc:85713
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 7115 bases
Position: chrKV575350.1:1788435-1795549
Accession: 108428659
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000024055	SRP54	PF00448.22	8.7e-78	1	1
ENSPNAP00000024055	SRP54_N	PF02881.19	4.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000011089	-	2998	XM_017699813	ENSPNAP00000024055	504 (aa)	XP_017555302	UPI00081492B4

Gene Model

Click here to download ENSPNAG00000008544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000008544's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000008544	srp54	100	95.833	ENSG00000100883	SRP54	100	97.674	Homo_sapiens
ENSPNAG00000008544	srp54	100	97.817	ENSAPOG00000011314	srp54	100	97.817	Acanthochromis_polyacanthus
ENSPNAG00000008544	srp54	100	95.833	ENSAMEG00000015544	SRP54	100	95.833	Ailuropoda_melanoleuca
ENSPNAG00000008544	srp54	89	96.437	ENSACIG00000022831	srp54	97	96.437	Amphilophus_citrinellus
ENSPNAG00000008544	srp54	100	97.817	ENSAOCG00000019401	srp54	100	97.817	Amphiprion_ocellaris
ENSPNAG00000008544	srp54	100	97.817	ENSAPEG00000001977	srp54	100	97.817	Amphiprion_percula
ENSPNAG00000008544	srp54	100	98.214	ENSATEG00000013877	srp54	100	98.214	Anabas_testudineus
ENSPNAG00000008544	srp54	94	95.570	ENSAPLG00000010125	SRP54	95	95.570	Anas_platyrhynchos
ENSPNAG00000008544	srp54	86	92.857	ENSACAG00000010631	-	100	92.857	Anolis_carolinensis
ENSPNAG00000008544	srp54	65	79.456	ENSACAG00000001124	-	100	79.456	Anolis_carolinensis
ENSPNAG00000008544	srp54	100	95.635	ENSACAG00000002103	-	100	95.635	Anolis_carolinensis
ENSPNAG00000008544	srp54	100	95.833	ENSANAG00000022133	SRP54	100	95.833	Aotus_nancymaae
ENSPNAG00000008544	srp54	100	98.016	ENSACLG00000015866	srp54	100	98.016	Astatotilapia_calliptera
ENSPNAG00000008544	srp54	100	99.802	ENSAMXG00000032669	SRP54	100	99.802	Astyanax_mexicanus
ENSPNAG00000008544	srp54	100	95.833	ENSBTAG00000019085	SRP54	100	95.833	Bos_taurus
ENSPNAG00000008544	srp54	98	73.293	WBGene00009012	F21D5.7	100	73.293	Caenorhabditis_elegans
ENSPNAG00000008544	srp54	100	95.833	ENSCJAG00000006581	SRP54	100	95.833	Callithrix_jacchus
ENSPNAG00000008544	srp54	100	95.833	ENSCAFG00000013331	SRP54	100	95.833	Canis_familiaris
ENSPNAG00000008544	srp54	100	95.833	ENSCAFG00020023427	SRP54	100	95.833	Canis_lupus_dingo
ENSPNAG00000008544	srp54	100	95.833	ENSCHIG00000026345	SRP54	100	95.833	Capra_hircus
ENSPNAG00000008544	srp54	100	95.635	ENSTSYG00000002680	-	100	95.635	Carlito_syrichta
ENSPNAG00000008544	srp54	94	84.211	ENSTSYG00000035333	-	93	84.211	Carlito_syrichta
ENSPNAG00000008544	srp54	94	62.041	ENSCAPG00000008780	SRP54	100	62.041	Cavia_aperea
ENSPNAG00000008544	srp54	100	95.437	ENSCPOG00000003691	SRP54	100	95.437	Cavia_porcellus
ENSPNAG00000008544	srp54	90	95.476	ENSCCAG00000024179	SRP54	100	95.704	Cebus_capucinus
ENSPNAG00000008544	srp54	100	95.833	ENSCATG00000034083	SRP54	100	95.833	Cercocebus_atys
ENSPNAG00000008544	srp54	100	95.833	ENSCLAG00000015076	SRP54	100	95.833	Chinchilla_lanigera
ENSPNAG00000008544	srp54	100	95.833	ENSCSAG00000015575	SRP54	100	95.833	Chlorocebus_sabaeus
ENSPNAG00000008544	srp54	95	84.200	ENSCHOG00000008986	SRP54	100	84.200	Choloepus_hoffmanni
ENSPNAG00000008544	srp54	100	96.230	ENSCPBG00000026195	SRP54	100	96.230	Chrysemys_picta_bellii
ENSPNAG00000008544	srp54	100	82.540	ENSCING00000007380	-	100	82.540	Ciona_intestinalis
ENSPNAG00000008544	srp54	100	95.833	ENSCANG00000028532	SRP54	100	95.833	Colobus_angolensis_palliatus
ENSPNAG00000008544	srp54	100	95.833	ENSCGRG00001009525	-	100	95.833	Cricetulus_griseus_chok1gshd
ENSPNAG00000008544	srp54	76	96.623	ENSCGRG00000009453	-	89	96.623	Cricetulus_griseus_crigri
ENSPNAG00000008544	srp54	100	97.024	ENSCSEG00000012392	srp54	100	97.024	Cynoglossus_semilaevis
ENSPNAG00000008544	srp54	100	97.817	ENSCVAG00000010395	srp54	100	97.817	Cyprinodon_variegatus
ENSPNAG00000008544	srp54	100	99.008	ENSDARG00000098367	srp54	100	99.008	Danio_rerio
ENSPNAG00000008544	srp54	100	95.833	ENSDNOG00000032525	SRP54	100	95.833	Dasypus_novemcinctus
ENSPNAG00000008544	srp54	89	80.752	ENSDORG00000005159	-	98	80.752	Dipodomys_ordii
ENSPNAG00000008544	srp54	96	79.588	FBgn0010747	Srp54k	98	79.116	Drosophila_melanogaster
ENSPNAG00000008544	srp54	100	94.643	ENSETEG00000016307	-	100	94.643	Echinops_telfairi
ENSPNAG00000008544	srp54	83	55.981	ENSETEG00000012102	-	99	55.981	Echinops_telfairi
ENSPNAG00000008544	srp54	100	88.690	ENSEBUG00000009437	-	100	88.690	Eptatretus_burgeri
ENSPNAG00000008544	srp54	100	95.833	ENSEASG00005002057	SRP54	100	95.833	Equus_asinus_asinus
ENSPNAG00000008544	srp54	99	95.582	ENSECAG00000018042	SRP54	98	95.582	Equus_caballus
ENSPNAG00000008544	srp54	100	79.960	ENSEEUG00000001511	SRP54	100	79.960	Erinaceus_europaeus
ENSPNAG00000008544	srp54	100	97.619	ENSELUG00000003395	srp54	100	97.619	Esox_lucius
ENSPNAG00000008544	srp54	100	95.635	ENSFCAG00000032033	SRP54	100	95.635	Felis_catus
ENSPNAG00000008544	srp54	100	95.833	ENSFALG00000005995	SRP54	100	95.833	Ficedula_albicollis
ENSPNAG00000008544	srp54	100	95.833	ENSFDAG00000016767	SRP54	100	95.833	Fukomys_damarensis
ENSPNAG00000008544	srp54	100	97.817	ENSFHEG00000004263	srp54	100	97.817	Fundulus_heteroclitus
ENSPNAG00000008544	srp54	95	92.469	ENSGMOG00000011391	srp54	100	92.469	Gadus_morhua
ENSPNAG00000008544	srp54	100	95.833	ENSGALG00000023135	SRP54	100	95.833	Gallus_gallus
ENSPNAG00000008544	srp54	100	98.016	ENSGAFG00000011586	srp54	100	98.016	Gambusia_affinis
ENSPNAG00000008544	srp54	100	97.817	ENSGACG00000004181	srp54	100	97.817	Gasterosteus_aculeatus
ENSPNAG00000008544	srp54	100	96.230	ENSGAGG00000014766	SRP54	100	96.230	Gopherus_agassizii
ENSPNAG00000008544	srp54	100	95.833	ENSGGOG00000002926	SRP54	100	95.833	Gorilla_gorilla
ENSPNAG00000008544	srp54	100	98.016	ENSHBUG00000005678	srp54	100	98.016	Haplochromis_burtoni
ENSPNAG00000008544	srp54	100	95.833	ENSHGLG00000002850	SRP54	100	95.833	Heterocephalus_glaber_female
ENSPNAG00000008544	srp54	100	66.733	ENSHGLG00100007281	-	100	66.733	Heterocephalus_glaber_male
ENSPNAG00000008544	srp54	100	95.833	ENSHGLG00100005263	SRP54	100	95.833	Heterocephalus_glaber_male
ENSPNAG00000008544	srp54	100	96.032	ENSHCOG00000021127	srp54	100	96.032	Hippocampus_comes
ENSPNAG00000008544	srp54	100	99.008	ENSIPUG00000001420	srp54	100	99.008	Ictalurus_punctatus
ENSPNAG00000008544	srp54	100	95.833	ENSSTOG00000016023	SRP54	100	95.833	Ictidomys_tridecemlineatus
ENSPNAG00000008544	srp54	100	91.071	ENSJJAG00000013417	-	100	91.071	Jaculus_jaculus
ENSPNAG00000008544	srp54	87	74.545	ENSJJAG00000016404	-	100	74.545	Jaculus_jaculus
ENSPNAG00000008544	srp54	100	97.817	ENSKMAG00000007707	srp54	100	97.817	Kryptolebias_marmoratus
ENSPNAG00000008544	srp54	100	97.817	ENSLBEG00000018690	srp54	100	97.817	Labrus_bergylta
ENSPNAG00000008544	srp54	100	97.817	ENSLBEG00000021122	srp54	100	97.817	Labrus_bergylta
ENSPNAG00000008544	srp54	100	95.833	ENSLACG00000017890	SRP54	100	95.833	Latimeria_chalumnae
ENSPNAG00000008544	srp54	100	98.016	ENSLOCG00000009440	srp54	100	98.016	Lepisosteus_oculatus
ENSPNAG00000008544	srp54	100	95.833	ENSLAFG00000012007	SRP54	100	95.833	Loxodonta_africana
ENSPNAG00000008544	srp54	100	95.833	ENSMFAG00000044371	SRP54	100	95.833	Macaca_fascicularis
ENSPNAG00000008544	srp54	100	95.833	ENSMMUG00000015073	FAM177A1	100	95.833	Macaca_mulatta
ENSPNAG00000008544	srp54	100	95.833	ENSMNEG00000006947	SRP54	100	95.833	Macaca_nemestrina
ENSPNAG00000008544	srp54	100	95.833	ENSMLEG00000042251	SRP54	100	95.833	Mandrillus_leucophaeus
ENSPNAG00000008544	srp54	100	98.016	ENSMAMG00000004803	srp54	100	98.016	Mastacembelus_armatus
ENSPNAG00000008544	srp54	100	98.016	ENSMZEG00005027528	srp54	100	98.016	Maylandia_zebra
ENSPNAG00000008544	srp54	100	91.502	ENSMGAG00000012481	SRP54	100	91.502	Meleagris_gallopavo
ENSPNAG00000008544	srp54	100	96.032	ENSMAUG00000014447	-	100	96.032	Mesocricetus_auratus
ENSPNAG00000008544	srp54	100	95.833	ENSMICG00000010270	SRP54	100	95.833	Microcebus_murinus
ENSPNAG00000008544	srp54	87	95.909	ENSMOCG00000000948	-	100	95.909	Microtus_ochrogaster
ENSPNAG00000008544	srp54	90	95.154	ENSMMOG00000020303	srp54	99	95.154	Mola_mola
ENSPNAG00000008544	srp54	100	95.833	ENSMODG00000023150	-	100	95.833	Monodelphis_domestica
ENSPNAG00000008544	srp54	100	95.833	ENSMODG00000012925	-	100	95.833	Monodelphis_domestica
ENSPNAG00000008544	srp54	88	97.291	ENSMALG00000009163	srp54	98	97.291	Monopterus_albus
ENSPNAG00000008544	srp54	100	96.032	MGP_CAROLIEiJ_G0017754	-	100	96.032	Mus_caroli
ENSPNAG00000008544	srp54	100	96.032	ENSMUSG00000112449	Srp54b	100	96.032	Mus_musculus
ENSPNAG00000008544	srp54	100	95.238	ENSMUSG00000079108	Srp54c	100	95.238	Mus_musculus
ENSPNAG00000008544	srp54	100	96.032	ENSMUSG00000073079	Srp54a	100	96.032	Mus_musculus
ENSPNAG00000008544	srp54	100	96.032	MGP_PahariEiJ_G0029510	-	100	96.032	Mus_pahari
ENSPNAG00000008544	srp54	100	95.833	ENSMPUG00000016302	SRP54	100	95.833	Mustela_putorius_furo
ENSPNAG00000008544	srp54	100	95.238	ENSMLUG00000008958	SRP54	100	95.238	Myotis_lucifugus
ENSPNAG00000008544	srp54	100	86.310	ENSNGAG00000019806	-	100	86.310	Nannospalax_galili
ENSPNAG00000008544	srp54	87	97.955	ENSNBRG00000006000	srp54	100	97.955	Neolamprologus_brichardi
ENSPNAG00000008544	srp54	100	95.833	ENSNLEG00000003496	SRP54	100	95.833	Nomascus_leucogenys
ENSPNAG00000008544	srp54	67	98.214	ENSMEUG00000000138	-	76	98.214	Notamacropus_eugenii
ENSPNAG00000008544	srp54	58	96.721	ENSOPRG00000014502	-	60	96.721	Ochotona_princeps
ENSPNAG00000008544	srp54	100	95.833	ENSODEG00000004865	SRP54	100	95.833	Octodon_degus
ENSPNAG00000008544	srp54	100	98.016	ENSONIG00000011768	srp54	100	98.016	Oreochromis_niloticus
ENSPNAG00000008544	srp54	100	95.833	ENSOANG00000014051	SRP54	100	95.833	Ornithorhynchus_anatinus
ENSPNAG00000008544	srp54	100	95.238	ENSOCUG00000007838	SRP54	100	95.238	Oryctolagus_cuniculus
ENSPNAG00000008544	srp54	100	98.214	ENSORLG00000010027	srp54	100	98.214	Oryzias_latipes
ENSPNAG00000008544	srp54	100	98.214	ENSORLG00020001878	srp54	100	98.214	Oryzias_latipes_hni
ENSPNAG00000008544	srp54	100	98.214	ENSORLG00015021866	srp54	100	98.214	Oryzias_latipes_hsok
ENSPNAG00000008544	srp54	100	98.016	ENSOMEG00000020952	srp54	100	98.016	Oryzias_melastigma
ENSPNAG00000008544	srp54	100	95.833	ENSOGAG00000012188	SRP54	100	95.833	Otolemur_garnettii
ENSPNAG00000008544	srp54	100	95.833	ENSOARG00000007160	SRP54	100	95.833	Ovis_aries
ENSPNAG00000008544	srp54	100	95.833	ENSPPAG00000017434	SRP54	100	95.833	Pan_paniscus
ENSPNAG00000008544	srp54	100	94.841	ENSPPRG00000014047	SRP54	100	94.841	Panthera_pardus
ENSPNAG00000008544	srp54	100	95.635	ENSPTIG00000000744	SRP54	96	95.635	Panthera_tigris_altaica
ENSPNAG00000008544	srp54	100	95.833	ENSPTRG00000006259	FAM177A1	100	95.833	Pan_troglodytes
ENSPNAG00000008544	srp54	100	95.833	ENSPANG00000023853	SRP54	100	95.833	Papio_anubis
ENSPNAG00000008544	srp54	100	98.214	ENSPKIG00000001953	srp54	100	98.214	Paramormyrops_kingsleyae
ENSPNAG00000008544	srp54	100	96.032	ENSPSIG00000006476	SRP54	100	96.032	Pelodiscus_sinensis
ENSPNAG00000008544	srp54	91	94.783	ENSPMGG00000004127	srp54	99	94.783	Periophthalmus_magnuspinnatus
ENSPNAG00000008544	srp54	100	84.127	ENSPEMG00000019634	-	100	84.127	Peromyscus_maniculatus_bairdii
ENSPNAG00000008544	srp54	100	90.278	ENSPMAG00000006078	-	100	90.278	Petromyzon_marinus
ENSPNAG00000008544	srp54	100	95.833	ENSPCIG00000016175	SRP54	100	95.833	Phascolarctos_cinereus
ENSPNAG00000008544	srp54	100	98.016	ENSPFOG00000008870	srp54	100	98.016	Poecilia_formosa
ENSPNAG00000008544	srp54	100	98.016	ENSPLAG00000009889	srp54	100	98.016	Poecilia_latipinna
ENSPNAG00000008544	srp54	100	98.016	ENSPMEG00000008601	srp54	100	98.016	Poecilia_mexicana
ENSPNAG00000008544	srp54	100	98.016	ENSPREG00000004505	srp54	100	98.016	Poecilia_reticulata
ENSPNAG00000008544	srp54	100	91.071	ENSPPYG00000005739	SRP54	100	91.071	Pongo_abelii
ENSPNAG00000008544	srp54	100	91.865	ENSPCAG00000006268	SRP54	100	91.865	Procavia_capensis
ENSPNAG00000008544	srp54	100	93.861	ENSPCOG00000022473	SRP54	100	93.861	Propithecus_coquereli
ENSPNAG00000008544	srp54	63	96.809	ENSPVAG00000010056	SRP54	82	96.809	Pteropus_vampyrus
ENSPNAG00000008544	srp54	100	98.016	ENSPNYG00000009717	srp54	100	98.016	Pundamilia_nyererei
ENSPNAG00000008544	srp54	100	95.833	ENSRNOG00000032776	Srp54a	100	95.833	Rattus_norvegicus
ENSPNAG00000008544	srp54	100	95.833	ENSRROG00000041292	SRP54	100	95.833	Rhinopithecus_roxellana
ENSPNAG00000008544	srp54	86	51.474	YPR088C	SRP54	95	47.126	Saccharomyces_cerevisiae
ENSPNAG00000008544	srp54	94	95.570	ENSSBOG00000035145	SRP54	100	95.570	Saimiri_boliviensis_boliviensis
ENSPNAG00000008544	srp54	68	95.335	ENSSHAG00000000671	SRP54	100	95.335	Sarcophilus_harrisii
ENSPNAG00000008544	srp54	100	97.817	ENSSFOG00015013920	srp54	100	97.817	Scleropages_formosus
ENSPNAG00000008544	srp54	100	91.948	ENSSMAG00000002441	srp54	100	91.948	Scophthalmus_maximus
ENSPNAG00000008544	srp54	100	97.619	ENSSDUG00000018586	srp54	100	97.619	Seriola_dumerili
ENSPNAG00000008544	srp54	100	97.421	ENSSLDG00000010476	srp54	100	97.421	Seriola_lalandi_dorsalis
ENSPNAG00000008544	srp54	100	95.833	ENSSARG00000002744	SRP54	100	95.833	Sorex_araneus
ENSPNAG00000008544	srp54	100	96.230	ENSSPUG00000013101	SRP54	100	96.230	Sphenodon_punctatus
ENSPNAG00000008544	srp54	100	97.817	ENSSPAG00000002354	srp54	100	97.817	Stegastes_partitus
ENSPNAG00000008544	srp54	100	95.833	ENSSSCG00000001955	SRP54	100	95.833	Sus_scrofa
ENSPNAG00000008544	srp54	94	95.570	ENSTGUG00000011945	-	95	95.570	Taeniopygia_guttata
ENSPNAG00000008544	srp54	100	97.421	ENSTRUG00000007057	srp54	100	97.421	Takifugu_rubripes
ENSPNAG00000008544	srp54	100	96.825	ENSTNIG00000002589	srp54	100	96.825	Tetraodon_nigroviridis
ENSPNAG00000008544	srp54	89	87.025	ENSTBEG00000011409	SRP54	100	87.025	Tupaia_belangeri
ENSPNAG00000008544	srp54	100	86.310	ENSTTRG00000000928	SRP54	100	86.310	Tursiops_truncatus
ENSPNAG00000008544	srp54	52	96.565	ENSUAMG00000012385	SRP54	100	96.565	Ursus_americanus
ENSPNAG00000008544	srp54	100	95.833	ENSUMAG00000011234	SRP54	100	95.833	Ursus_maritimus
ENSPNAG00000008544	srp54	94	95.359	ENSVPAG00000005668	SRP54	100	95.359	Vicugna_pacos
ENSPNAG00000008544	srp54	100	95.833	ENSVVUG00000019962	SRP54	100	95.833	Vulpes_vulpes
ENSPNAG00000008544	srp54	100	81.460	ENSXETG00000012290	srp54	100	81.460	Xenopus_tropicalis
ENSPNAG00000008544	srp54	88	97.743	ENSXCOG00000004658	srp54	96	97.743	Xiphophorus_couchianus
ENSPNAG00000008544	srp54	100	98.016	ENSXMAG00000018315	srp54	100	98.016	Xiphophorus_maculatus