EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPNAG00000008599 (Gene tree)
Gene ID
108425791
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A1
Gene Type
protein_coding
Species
Pygocentrus_nattereri
Status
putative
Strand
Minus strand
Length
26485 bases
Position
chrKV575321.1:2816409-2842893
Accession
108425791
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNAP00000002017tRNA_anti-codonPF01336.257.3e-1411
ENSPNAP00000002032tRNA_anti-codonPF01336.257.6e-1411
ENSPNAP00000002042tRNA_anti-codonPF01336.257.6e-1411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNAT00000011155-1743-ENSPNAP00000002017580 (aa)--
ENSPNAT00000011107-1782-ENSPNAP00000002042593 (aa)--
ENSPNAT00000011134-1779XM_017694745ENSPNAP00000002032592 (aa)XP_017550234-
Gene Model
Click here to download ENSPNAG00000008599's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000008599's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNAG00000008599rpa19657.384ENSAPOG00000019409RPA18358.747Acanthochromis_polyacanthus
ENSPNAG00000008599rpa19669.808ENSAPOG00000011658rpa110068.078Acanthochromis_polyacanthus
ENSPNAG00000008599rpa19556.971ENSAMEG00000007706RPA19755.482Ailuropoda_melanoleuca
ENSPNAG00000008599rpa19663.509ENSACIG00000007277rpa19963.993Amphilophus_citrinellus
ENSPNAG00000008599rpa19656.873ENSACIG00000012881RPA19956.122Amphilophus_citrinellus
ENSPNAG00000008599rpa19952.294ENSAOCG00000009003RPA110052.227Amphiprion_ocellaris
ENSPNAG00000008599rpa19967.541ENSAOCG00000023376rpa110068.496Amphiprion_ocellaris
ENSPNAG00000008599rpa19967.377ENSAPEG00000008634rpa110068.375Amphiprion_percula
ENSPNAG00000008599rpa19951.719ENSAPEG00000019132RPA19551.969Amphiprion_percula
ENSPNAG00000008599rpa19668.412ENSATEG00000022024rpa110068.190Anabas_testudineus
ENSPNAG00000008599rpa19953.272ENSATEG00000006443RPA110052.680Anabas_testudineus
ENSPNAG00000008599rpa19758.505ENSAPLG00000012442RPA19658.853Anas_platyrhynchos
ENSPNAG00000008599rpa19949.111ENSACAG00000014490RPA19852.087Anolis_carolinensis
ENSPNAG00000008599rpa19656.971ENSANAG00000023456RPA19855.892Aotus_nancymaae
ENSPNAG00000008599rpa19668.935ENSACLG00000006640rpa19969.912Astatotilapia_calliptera
ENSPNAG00000008599rpa19954.193ENSACLG00000005223RPA19954.747Astatotilapia_calliptera
ENSPNAG00000008599rpa19684.091ENSAMXG00000008418rpa19982.689Astyanax_mexicanus
ENSPNAG00000008599rpa19656.529ENSBTAG00000009711RPA18471.429Bos_taurus
ENSPNAG00000008599rpa19953.291ENSCJAG00000001848RPA19953.710Callithrix_jacchus
ENSPNAG00000008599rpa19555.766ENSCAFG00000019249RPA19854.817Canis_familiaris
ENSPNAG00000008599rpa19555.766ENSCAFG00020009847RPA19854.817Canis_lupus_dingo
ENSPNAG00000008599rpa19656.947ENSCHIG00000026308RPA19955.574Capra_hircus
ENSPNAG00000008599rpa19953.760ENSTSYG00000003482-9855.390Carlito_syrichta
ENSPNAG00000008599rpa19656.947ENSCPOG00000000035RPA19854.561Cavia_porcellus
ENSPNAG00000008599rpa19063.636ENSCCAG00000010981RPA19963.636Cebus_capucinus
ENSPNAG00000008599rpa19655.842ENSCLAG00000005185-9953.583Chinchilla_lanigera
ENSPNAG00000008599rpa19654.737ENSCLAG00000015045-9852.961Chinchilla_lanigera
ENSPNAG00000008599rpa19064.646ENSCSAG00000013833RPA19964.646Chlorocebus_sabaeus
ENSPNAG00000008599rpa17358.447ENSCHOG00000009454-9959.447Choloepus_hoffmanni
ENSPNAG00000008599rpa19654.639ENSCHOG00000013540-9953.663Choloepus_hoffmanni
ENSPNAG00000008599rpa110053.612ENSCPBG00000020377RPA19955.342Chrysemys_picta_bellii
ENSPNAG00000008599rpa19937.357ENSCING00000023482-9937.194Ciona_intestinalis
ENSPNAG00000008599rpa19656.545ENSCANG00000030911RPA19956.102Colobus_angolensis_palliatus
ENSPNAG00000008599rpa19954.093ENSCGRG00001008197Rpa19855.372Cricetulus_griseus_chok1gshd
ENSPNAG00000008599rpa18354.883ENSCGRG00000000582Rpa18958.811Cricetulus_griseus_crigri
ENSPNAG00000008599rpa19963.295ENSCSEG00000013066rpa19964.725Cynoglossus_semilaevis
ENSPNAG00000008599rpa19949.048ENSCSEG00000012726RPA19950.514Cynoglossus_semilaevis
ENSPNAG00000008599rpa19650.538ENSCVAG00000013446-8660.183Cyprinodon_variegatus
ENSPNAG00000008599rpa19966.124ENSCVAG00000019431rpa110067.986Cyprinodon_variegatus
ENSPNAG00000008599rpa110072.476ENSDARG00000003938rpa19974.286Danio_rerio
ENSPNAG00000008599rpa19657.290ENSDNOG00000017218RPA19855.702Dasypus_novemcinctus
ENSPNAG00000008599rpa19954.098ENSDORG00000006199Rpa19954.983Dipodomys_ordii
ENSPNAG00000008599rpa19538.007FBgn0010173RpA-709737.730Drosophila_melanogaster
ENSPNAG00000008599rpa18268.041ENSETEG00000017608RPA18268.041Echinops_telfairi
ENSPNAG00000008599rpa19755.385ENSEASG00005009372RPA19660.976Equus_asinus_asinus
ENSPNAG00000008599rpa19655.385ENSECAG00000023886RPA19855.150Equus_caballus
ENSPNAG00000008599rpa17059.338ENSEEUG00000002186-6859.524Erinaceus_europaeus
ENSPNAG00000008599rpa19056.611ENSELUG00000006136RPA19956.554Esox_lucius
ENSPNAG00000008599rpa19670.957ENSELUG00000021071rpa19869.833Esox_lucius
ENSPNAG00000008599rpa19655.631ENSFCAG00000006306RPA19754.726Felis_catus
ENSPNAG00000008599rpa19953.920ENSFALG00000006575RPA19855.446Ficedula_albicollis
ENSPNAG00000008599rpa19953.376ENSFDAG00000007720RPA19854.983Fukomys_damarensis
ENSPNAG00000008599rpa19668.750ENSFHEG00000003580rpa19967.388Fundulus_heteroclitus
ENSPNAG00000008599rpa19963.502ENSGMOG00000010382rpa19965.424Gadus_morhua
ENSPNAG00000008599rpa19952.866ENSGALG00000003072RPA19854.785Gallus_gallus
ENSPNAG00000008599rpa19951.364ENSGAFG00000020953RPA19853.261Gambusia_affinis
ENSPNAG00000008599rpa19668.586ENSGAFG00000012916rpa19966.891Gambusia_affinis
ENSPNAG00000008599rpa19668.467ENSGACG00000010856rpa19966.332Gasterosteus_aculeatus
ENSPNAG00000008599rpa110053.291ENSGAGG00000013611RPA19952.903Gopherus_agassizii
ENSPNAG00000008599rpa19953.333ENSGGOG00000014186RPA19755.688Gorilla_gorilla
ENSPNAG00000008599rpa19672.028ENSHBUG00000017773rpa19969.916Haplochromis_burtoni
ENSPNAG00000008599rpa19649.147ENSHBUG00000009348RPA19849.483Haplochromis_burtoni
ENSPNAG00000008599rpa19952.894ENSHGLG00000008846RPA110053.150Heterocephalus_glaber_female
ENSPNAG00000008599rpa19952.894ENSHGLG00100017755-10053.150Heterocephalus_glaber_male
ENSPNAG00000008599rpa19647.938ENSHGLG00100002005-9746.423Heterocephalus_glaber_male
ENSPNAG00000008599rpa19950.161ENSHGLG00100000799-9949.919Heterocephalus_glaber_male
ENSPNAG00000008599rpa19664.261ENSHCOG00000001401rpa19962.975Hippocampus_comes
ENSPNAG00000008599rpa19940.976ENSHCOG00000000351RPA19940.813Hippocampus_comes
ENSPNAG00000008599rpa19781.067ENSIPUG00000004400rpa19980.268Ictalurus_punctatus
ENSPNAG00000008599rpa19651.299ENSSTOG00000022475RPA19950.487Ictidomys_tridecemlineatus
ENSPNAG00000008599rpa19657.633ENSJJAG00000000876Rpa19856.102Jaculus_jaculus
ENSPNAG00000008599rpa19656.272ENSKMAG00000000234RPA19954.758Kryptolebias_marmoratus
ENSPNAG00000008599rpa19963.355ENSKMAG00000005605rpa19964.735Kryptolebias_marmoratus
ENSPNAG00000008599rpa19956.757ENSLBEG00000002281RPA18258.710Labrus_bergylta
ENSPNAG00000008599rpa19670.087ENSLBEG00000021604rpa19967.780Labrus_bergylta
ENSPNAG00000008599rpa18155.601ENSLACG00000007210RPA19356.803Latimeria_chalumnae
ENSPNAG00000008599rpa110062.945ENSLOCG00000006397rpa19964.274Lepisosteus_oculatus
ENSPNAG00000008599rpa19854.400ENSLAFG00000015354RPA19953.760Loxodonta_africana
ENSPNAG00000008599rpa17458.696ENSMFAG00000036138-9057.860Macaca_fascicularis
ENSPNAG00000008599rpa19949.596ENSMMUG00000002442-9851.171Macaca_mulatta
ENSPNAG00000008599rpa19656.627ENSMMUG00000011604-9955.058Macaca_mulatta
ENSPNAG00000008599rpa19954.290ENSMNEG00000031632-9954.711Macaca_nemestrina
ENSPNAG00000008599rpa19648.606ENSMNEG00000029837-9554.684Macaca_nemestrina
ENSPNAG00000008599rpa19655.672ENSMLEG00000038768-9954.958Mandrillus_leucophaeus
ENSPNAG00000008599rpa19658.861ENSMAMG00000020097RPA19060.699Mastacembelus_armatus
ENSPNAG00000008599rpa19671.030ENSMAMG00000017993rpa110068.366Mastacembelus_armatus
ENSPNAG00000008599rpa19671.853ENSMZEG00005007551rpa19969.916Maylandia_zebra
ENSPNAG00000008599rpa19954.193ENSMZEG00005024731RPA19954.747Maylandia_zebra
ENSPNAG00000008599rpa19654.950ENSMGAG00000005315RPA19854.620Meleagris_gallopavo
ENSPNAG00000008599rpa19655.897ENSMAUG00000010474Rpa19956.000Mesocricetus_auratus
ENSPNAG00000008599rpa19952.894ENSMICG00000012867RPA19855.150Microcebus_murinus
ENSPNAG00000008599rpa19954.267ENSMOCG00000013019Rpa19855.593Microtus_ochrogaster
ENSPNAG00000008599rpa19967.169ENSMMOG00000014292rpa19967.470Mola_mola
ENSPNAG00000008599rpa19657.833ENSMMOG00000010868RPA19857.673Mola_mola
ENSPNAG00000008599rpa110053.280ENSMODG00000010549RPA19854.651Monodelphis_domestica
ENSPNAG00000008599rpa19670.506ENSMALG00000011453rpa19968.908Monopterus_albus
ENSPNAG00000008599rpa19660.899ENSMALG00000001208RPA18158.650Monopterus_albus
ENSPNAG00000008599rpa19954.589MGP_CAROLIEiJ_G0016734Rpa19855.887Mus_caroli
ENSPNAG00000008599rpa19954.545ENSMUSG00000000751Rpa19954.575Mus_musculus
ENSPNAG00000008599rpa19656.997MGP_PahariEiJ_G0017871Rpa19855.941Mus_pahari
ENSPNAG00000008599rpa19954.459MGP_SPRETEiJ_G0017577Rpa19954.487Mus_spretus
ENSPNAG00000008599rpa19655.308ENSMPUG00000013119RPA19854.983Mustela_putorius_furo
ENSPNAG00000008599rpa19954.366ENSMLUG00000006113RPA19555.556Myotis_lucifugus
ENSPNAG00000008599rpa19656.581ENSNGAG00000004522Rpa19456.803Nannospalax_galili
ENSPNAG00000008599rpa19669.755ENSNBRG00000020595rpa19969.772Neolamprologus_brichardi
ENSPNAG00000008599rpa19654.878ENSNBRG00000009672RPA19754.530Neolamprologus_brichardi
ENSPNAG00000008599rpa19954.502ENSNLEG00000017149RPA19856.146Nomascus_leucogenys
ENSPNAG00000008599rpa18969.072ENSMEUG00000006714RPA18869.072Notamacropus_eugenii
ENSPNAG00000008599rpa19655.838ENSODEG00000009038RPA19754.424Octodon_degus
ENSPNAG00000008599rpa19671.698ENSONIG00000013135rpa19869.522Oreochromis_niloticus
ENSPNAG00000008599rpa19756.633ENSOANG00000010880RPA19956.291Ornithorhynchus_anatinus
ENSPNAG00000008599rpa19654.173ENSOCUG00000001504RPA19853.555Oryctolagus_cuniculus
ENSPNAG00000008599rpa19950.909ENSORLG00000003368RPA110050.450Oryzias_latipes
ENSPNAG00000008599rpa19966.612ENSORLG00000004856rpa19969.205Oryzias_latipes
ENSPNAG00000008599rpa19656.604ENSORLG00020015284RPA110048.820Oryzias_latipes_hni
ENSPNAG00000008599rpa19966.612ENSORLG00020008980rpa19969.205Oryzias_latipes_hni
ENSPNAG00000008599rpa19966.612ENSORLG00015013982rpa19969.205Oryzias_latipes_hsok
ENSPNAG00000008599rpa17357.639ENSORLG00015005867-9857.576Oryzias_latipes_hsok
ENSPNAG00000008599rpa19951.235ENSORLG00015020383RPA19951.969Oryzias_latipes_hsok
ENSPNAG00000008599rpa19668.126ENSOMEG00000004704rpa19966.892Oryzias_melastigma
ENSPNAG00000008599rpa19653.646ENSOMEG00000011040RPA110053.054Oryzias_melastigma
ENSPNAG00000008599rpa19953.772ENSOGAG00000005581-9855.648Otolemur_garnettii
ENSPNAG00000008599rpa17061.446ENSOGAG00000029379-9658.088Otolemur_garnettii
ENSPNAG00000008599rpa19656.873ENSOARG00000014479RPA19855.390Ovis_aries
ENSPNAG00000008599rpa19954.019ENSPPAG00000039680RPA19855.648Pan_paniscus
ENSPNAG00000008599rpa19953.205ENSPPRG00000011807RPA19953.065Panthera_pardus
ENSPNAG00000008599rpa19655.461ENSPTIG00000007898RPA19754.561Panthera_tigris_altaica
ENSPNAG00000008599rpa19954.180ENSPTRG00000008539RPA19855.814Pan_troglodytes
ENSPNAG00000008599rpa19656.799ENSPANG00000024592RPA19855.224Papio_anubis
ENSPNAG00000008599rpa19668.339ENSPKIG00000008053rpa19866.777Paramormyrops_kingsleyae
ENSPNAG00000008599rpa19754.685ENSPSIG00000015617RPA19953.744Pelodiscus_sinensis
ENSPNAG00000008599rpa19953.312ENSPMGG00000000543RPA19956.964Periophthalmus_magnuspinnatus
ENSPNAG00000008599rpa19966.835ENSPMGG00000011589rpa19868.827Periophthalmus_magnuspinnatus
ENSPNAG00000008599rpa19656.432ENSPEMG00000021061Rpa19856.000Peromyscus_maniculatus_bairdii
ENSPNAG00000008599rpa19953.698ENSPCIG00000019049RPA19953.796Phascolarctos_cinereus
ENSPNAG00000008599rpa19669.459ENSPFOG00000003987rpa19967.953Poecilia_formosa
ENSPNAG00000008599rpa19669.459ENSPLAG00000004984rpa19967.953Poecilia_latipinna
ENSPNAG00000008599rpa19451.204ENSPLAG00000008844-9750.645Poecilia_latipinna
ENSPNAG00000008599rpa19451.043ENSPMEG00000003627-9750.645Poecilia_mexicana
ENSPNAG00000008599rpa19669.634ENSPMEG00000020602rpa19968.121Poecilia_mexicana
ENSPNAG00000008599rpa19362.271ENSPREG00000010174rpa18580.597Poecilia_reticulata
ENSPNAG00000008599rpa19657.526ENSPREG00000010119RPA18559.827Poecilia_reticulata
ENSPNAG00000008599rpa19952.251ENSPCOG00000001799RPA19854.485Propithecus_coquereli
ENSPNAG00000008599rpa19953.130ENSPVAG00000002149RPA19854.485Pteropus_vampyrus
ENSPNAG00000008599rpa19954.037ENSPNYG00000024165RPA19954.589Pundamilia_nyererei
ENSPNAG00000008599rpa19672.028ENSPNYG00000016316rpa19970.084Pundamilia_nyererei
ENSPNAG00000008599rpa19661.579ENSRNOG00000003123Rpa19857.000Rattus_norvegicus
ENSPNAG00000008599rpa19656.897ENSRBIG00000036587RPA19955.049Rhinopithecus_bieti
ENSPNAG00000008599rpa19753.794ENSRROG00000043278RPA19163.492Rhinopithecus_roxellana
ENSPNAG00000008599rpa19330.017YAR007CRFA16934.259Saccharomyces_cerevisiae
ENSPNAG00000008599rpa19355.674ENSSBOG00000030233RPA19755.221Saimiri_boliviensis_boliviensis
ENSPNAG00000008599rpa19756.197ENSSHAG00000007969RPA19855.189Sarcophilus_harrisii
ENSPNAG00000008599rpa110071.151ENSSFOG00015005362rpa19173.199Scleropages_formosus
ENSPNAG00000008599rpa19950.523ENSSMAG00000019746RPA110051.282Scophthalmus_maximus
ENSPNAG00000008599rpa19672.077ENSSDUG00000011949rpa19969.916Seriola_dumerili
ENSPNAG00000008599rpa19659.044ENSSDUG00000016358RPA18660.691Seriola_dumerili
ENSPNAG00000008599rpa19672.077ENSSLDG00000011806rpa19969.916Seriola_lalandi_dorsalis
ENSPNAG00000008599rpa19658.947ENSSLDG00000020784RPA19260.619Seriola_lalandi_dorsalis
ENSPNAG00000008599rpa17066.667ENSSARG00000007506RPA17266.667Sorex_araneus
ENSPNAG00000008599rpa19654.059ENSSPUG00000007223RPA19952.685Sphenodon_punctatus
ENSPNAG00000008599rpa19956.500ENSSPAG00000011165RPA19857.868Stegastes_partitus
ENSPNAG00000008599rpa19967.541ENSSPAG00000009903rpa19968.403Stegastes_partitus
ENSPNAG00000008599rpa19656.971ENSSSCG00000017822RPA19955.556Sus_scrofa
ENSPNAG00000008599rpa19656.239ENSTGUG00000005775RPA19855.132Taeniopygia_guttata
ENSPNAG00000008599rpa19561.358ENSTRUG00000000405RPA18460.739Takifugu_rubripes
ENSPNAG00000008599rpa19963.383ENSTRUG00000003616rpa19964.706Takifugu_rubripes
ENSPNAG00000008599rpa19964.895ENSTNIG00000016199rpa19965.785Tetraodon_nigroviridis
ENSPNAG00000008599rpa17759.864ENSTBEG00000002709RPA18159.184Tupaia_belangeri
ENSPNAG00000008599rpa19755.442ENSTTRG00000001169RPA19952.742Tursiops_truncatus
ENSPNAG00000008599rpa19563.830ENSUAMG00000015676RPA19971.154Ursus_americanus
ENSPNAG00000008599rpa19953.376ENSUMAG00000009328RPA19855.648Ursus_maritimus
ENSPNAG00000008599rpa19655.479ENSVPAG00000009443RPA19953.707Vicugna_pacos
ENSPNAG00000008599rpa19654.795ENSVVUG00000021715RPA19854.983Vulpes_vulpes
ENSPNAG00000008599rpa19659.792ENSXETG00000013538rpa19957.353Xenopus_tropicalis
ENSPNAG00000008599rpa19654.912ENSXCOG00000009899-9954.577Xiphophorus_couchianus
ENSPNAG00000008599rpa19466.607ENSXCOG00000010068rpa19567.321Xiphophorus_couchianus
ENSPNAG00000008599rpa19658.071ENSXMAG00000010333RPA18259.179Xiphophorus_maculatus
ENSPNAG00000008599rpa19668.586ENSXMAG00000004102rpa110068.149Xiphophorus_maculatus

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