EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000008633 (Gene tree)
Gene ID: 108444415
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 3143 bases
Position: chrKV575933.1:292491-295633
Accession: 108444415
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000002197	RRM_1	PF00076.22	7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000010843	-	524	XM_017725591	ENSPNAP00000002197	99 (aa)	XP_017581080	UPI0008143E44

Gene Model

Click here to download ENSPNAG00000008633's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000008633's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000008633	slirp	84	37.179	ENSPNAG00000000458	hnrnpaba	51	37.179
ENSPNAG00000008633	slirp	83	33.333	ENSPNAG00000028963	hnrnpabb	56	33.333
ENSPNAG00000008633	slirp	74	36.111	ENSPNAG00000016380	hnrnpdl	50	35.616

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000008633	slirp	90	55.056	ENSG00000119705	SLIRP	92	64.286	Homo_sapiens
ENSPNAG00000008633	slirp	99	79.592	ENSAPOG00000001298	slirp	98	79.592	Acanthochromis_polyacanthus
ENSPNAG00000008633	slirp	71	62.857	ENSAMEG00000003975	SLIRP	77	62.857	Ailuropoda_melanoleuca
ENSPNAG00000008633	slirp	97	78.125	ENSACIG00000023083	slirp	95	78.125	Amphilophus_citrinellus
ENSPNAG00000008633	slirp	97	82.292	ENSAOCG00000006342	slirp	97	82.292	Amphiprion_ocellaris
ENSPNAG00000008633	slirp	97	82.292	ENSAPEG00000015917	slirp	97	82.292	Amphiprion_percula
ENSPNAG00000008633	slirp	97	82.292	ENSAPEG00000015719	-	98	82.292	Amphiprion_percula
ENSPNAG00000008633	slirp	99	74.490	ENSATEG00000013525	slirp	98	74.490	Anabas_testudineus
ENSPNAG00000008633	slirp	99	67.347	ENSAMXG00000018693	slirp	98	67.347	Astyanax_mexicanus
ENSPNAG00000008633	slirp	79	64.103	ENSCJAG00000016946	SLIRP	72	67.164	Callithrix_jacchus
ENSPNAG00000008633	slirp	90	58.889	ENSCAFG00020015876	-	81	58.889	Canis_lupus_dingo
ENSPNAG00000008633	slirp	80	62.025	ENSCCAG00000030130	SLIRP	73	62.025	Cebus_capucinus
ENSPNAG00000008633	slirp	89	59.091	ENSCATG00000036327	SLIRP	72	67.164	Cercocebus_atys
ENSPNAG00000008633	slirp	89	59.091	ENSCSAG00000011736	SLIRP	80	59.091	Chlorocebus_sabaeus
ENSPNAG00000008633	slirp	82	60.494	ENSCPBG00000026327	SLIRP	82	60.494	Chrysemys_picta_bellii
ENSPNAG00000008633	slirp	68	70.149	ENSCANG00000032892	SLIRP	68	70.149	Colobus_angolensis_palliatus
ENSPNAG00000008633	slirp	99	48.485	ENSCGRG00001024068	Slirp	89	48.485	Cricetulus_griseus_chok1gshd
ENSPNAG00000008633	slirp	99	48.485	ENSCGRG00000017440	Slirp	89	48.485	Cricetulus_griseus_crigri
ENSPNAG00000008633	slirp	85	65.476	ENSCSEG00000015766	slirp	86	65.476	Cynoglossus_semilaevis
ENSPNAG00000008633	slirp	91	75.556	ENSCVAG00000012504	slirp	86	75.556	Cyprinodon_variegatus
ENSPNAG00000008633	slirp	95	82.979	ENSDARG00000097753	slirp	94	82.474	Danio_rerio
ENSPNAG00000008633	slirp	96	47.368	ENSDNOG00000007721	SLIRP	86	47.368	Dasypus_novemcinctus
ENSPNAG00000008633	slirp	89	56.180	ENSDORG00000012379	Slirp	80	56.180	Dipodomys_ordii
ENSPNAG00000008633	slirp	77	56.579	ENSETEG00000010345	SLIRP	70	56.579	Echinops_telfairi
ENSPNAG00000008633	slirp	89	61.798	ENSEASG00005020193	SLIRP	80	61.798	Equus_asinus_asinus
ENSPNAG00000008633	slirp	90	50.562	ENSEEUG00000007257	SLIRP	88	50.562	Erinaceus_europaeus
ENSPNAG00000008633	slirp	97	75.000	ENSELUG00000016800	slirp	95	75.000	Esox_lucius
ENSPNAG00000008633	slirp	69	69.118	ENSFCAG00000036326	SLIRP	69	69.118	Felis_catus
ENSPNAG00000008633	slirp	79	60.256	ENSFALG00000012583	SLIRP	88	53.763	Ficedula_albicollis
ENSPNAG00000008633	slirp	88	56.322	ENSFDAG00000008347	SLIRP	77	56.322	Fukomys_damarensis
ENSPNAG00000008633	slirp	77	76.316	ENSFHEG00000004709	slirp	83	76.316	Fundulus_heteroclitus
ENSPNAG00000008633	slirp	99	71.429	ENSGMOG00000016948	slirp	94	71.429	Gadus_morhua
ENSPNAG00000008633	slirp	93	56.383	ENSGALG00000031238	SLIRP	95	56.383	Gallus_gallus
ENSPNAG00000008633	slirp	96	72.632	ENSGAFG00000010998	slirp	95	72.632	Gambusia_affinis
ENSPNAG00000008633	slirp	83	78.049	ENSGACG00000020137	slirp	95	78.049	Gasterosteus_aculeatus
ENSPNAG00000008633	slirp	86	68.235	ENSGAGG00000009953	SLIRP	58	68.235	Gopherus_agassizii
ENSPNAG00000008633	slirp	90	55.056	ENSGGOG00000011059	-	73	64.706	Gorilla_gorilla
ENSPNAG00000008633	slirp	89	53.933	ENSHGLG00000018491	SLIRP	80	53.933	Heterocephalus_glaber_female
ENSPNAG00000008633	slirp	89	53.933	ENSHGLG00100014153	SLIRP	80	53.933	Heterocephalus_glaber_male
ENSPNAG00000008633	slirp	98	79.381	ENSHCOG00000006795	slirp	98	79.381	Hippocampus_comes
ENSPNAG00000008633	slirp	99	78.571	ENSIPUG00000010214	SLIRP	98	78.571	Ictalurus_punctatus
ENSPNAG00000008633	slirp	89	56.818	ENSSTOG00000034316	SLIRP	79	56.818	Ictidomys_tridecemlineatus
ENSPNAG00000008633	slirp	100	66.667	ENSKMAG00000002038	slirp	95	66.667	Kryptolebias_marmoratus
ENSPNAG00000008633	slirp	99	65.306	ENSLBEG00000007564	slirp	98	65.306	Labrus_bergylta
ENSPNAG00000008633	slirp	97	79.167	ENSLACG00000013434	SLIRP	92	79.167	Latimeria_chalumnae
ENSPNAG00000008633	slirp	88	56.322	ENSMFAG00000042960	SLIRP	73	66.176	Macaca_fascicularis
ENSPNAG00000008633	slirp	85	61.905	ENSMMUG00000029256	SLIRP	72	67.164	Macaca_mulatta
ENSPNAG00000008633	slirp	88	56.322	ENSMNEG00000028921	SLIRP	73	66.176	Macaca_nemestrina
ENSPNAG00000008633	slirp	69	66.176	ENSMLEG00000043644	SLIRP	68	67.164	Mandrillus_leucophaeus
ENSPNAG00000008633	slirp	97	80.208	ENSMZEG00005004617	slirp	97	80.208	Maylandia_zebra
ENSPNAG00000008633	slirp	89	52.273	ENSMAUG00000003857	Slirp	79	52.273	Mesocricetus_auratus
ENSPNAG00000008633	slirp	78	61.039	ENSMICG00000012080	SLIRP	66	63.380	Microcebus_murinus
ENSPNAG00000008633	slirp	89	57.955	ENSMOCG00000016019	Slirp	78	57.955	Microtus_ochrogaster
ENSPNAG00000008633	slirp	99	78.571	ENSMMOG00000018268	slirp	98	78.571	Mola_mola
ENSPNAG00000008633	slirp	71	61.429	ENSMODG00000005207	-	99	61.429	Monodelphis_domestica
ENSPNAG00000008633	slirp	99	66.327	ENSMALG00000012581	slirp	100	66.327	Monopterus_albus
ENSPNAG00000008633	slirp	88	57.955	MGP_CAROLIEiJ_G0017995	Slirp	81	57.955	Mus_caroli
ENSPNAG00000008633	slirp	88	57.955	ENSMUSG00000021040	Slirp	79	57.955	Mus_musculus
ENSPNAG00000008633	slirp	88	57.955	MGP_SPRETEiJ_G0018840	Slirp	79	57.955	Mus_spretus
ENSPNAG00000008633	slirp	98	59.184	ENSMLUG00000029544	-	86	59.184	Myotis_lucifugus
ENSPNAG00000008633	slirp	87	61.628	ENSMLUG00000024998	-	86	58.763	Myotis_lucifugus
ENSPNAG00000008633	slirp	88	54.545	ENSNGAG00000016363	Slirp	85	54.545	Nannospalax_galili
ENSPNAG00000008633	slirp	90	52.809	ENSNLEG00000027238	-	80	60.000	Nomascus_leucogenys
ENSPNAG00000008633	slirp	90	52.809	ENSNLEG00000032459	-	81	52.809	Nomascus_leucogenys
ENSPNAG00000008633	slirp	87	57.471	ENSODEG00000012580	SLIRP	76	62.857	Octodon_degus
ENSPNAG00000008633	slirp	97	79.167	ENSONIG00000011692	slirp	97	79.167	Oreochromis_niloticus
ENSPNAG00000008633	slirp	79	67.500	ENSOANG00000022366	SLIRP	72	67.500	Ornithorhynchus_anatinus
ENSPNAG00000008633	slirp	99	77.551	ENSORLG00000010761	slirp	76	77.551	Oryzias_latipes
ENSPNAG00000008633	slirp	99	76.531	ENSORLG00020022188	slirp	98	76.531	Oryzias_latipes_hni
ENSPNAG00000008633	slirp	98	77.320	ENSORLG00015020171	slirp	96	77.320	Oryzias_latipes_hsok
ENSPNAG00000008633	slirp	99	77.551	ENSOMEG00000019321	slirp	98	77.551	Oryzias_melastigma
ENSPNAG00000008633	slirp	90	56.180	ENSPPAG00000040710	-	73	64.706	Pan_paniscus
ENSPNAG00000008633	slirp	69	69.118	ENSPPRG00000014350	SLIRP	69	69.118	Panthera_pardus
ENSPNAG00000008633	slirp	69	69.118	ENSPTIG00000014196	SLIRP	69	69.118	Panthera_tigris_altaica
ENSPNAG00000008633	slirp	88	56.322	ENSPTRG00000030691	SLIRP	73	64.706	Pan_troglodytes
ENSPNAG00000008633	slirp	89	60.227	ENSPANG00000026323	SLIRP	72	68.657	Papio_anubis
ENSPNAG00000008633	slirp	80	68.354	ENSPKIG00000008831	slirp	78	68.354	Paramormyrops_kingsleyae
ENSPNAG00000008633	slirp	81	82.500	ENSPMGG00000010541	slirp	92	82.500	Periophthalmus_magnuspinnatus
ENSPNAG00000008633	slirp	89	51.136	ENSPEMG00000013234	Slirp	77	51.136	Peromyscus_maniculatus_bairdii
ENSPNAG00000008633	slirp	86	55.294	ENSPMAG00000009355	slirp	94	55.294	Petromyzon_marinus
ENSPNAG00000008633	slirp	80	54.430	ENSPCIG00000026842	-	85	54.430	Phascolarctos_cinereus
ENSPNAG00000008633	slirp	97	71.875	ENSPFOG00000006758	slirp	96	71.875	Poecilia_formosa
ENSPNAG00000008633	slirp	97	71.875	ENSPLAG00000011140	slirp	96	71.875	Poecilia_latipinna
ENSPNAG00000008633	slirp	97	71.875	ENSPMEG00000019535	slirp	96	71.875	Poecilia_mexicana
ENSPNAG00000008633	slirp	97	71.875	ENSPREG00000011673	slirp	96	71.875	Poecilia_reticulata
ENSPNAG00000008633	slirp	79	64.103	ENSPPYG00000006030	SLIRP	72	63.291	Pongo_abelii
ENSPNAG00000008633	slirp	83	59.756	ENSPCOG00000015159	SLIRP	71	59.756	Propithecus_coquereli
ENSPNAG00000008633	slirp	66	69.231	ENSRBIG00000031396	-	65	69.231	Rhinopithecus_bieti
ENSPNAG00000008633	slirp	68	67.164	ENSRBIG00000032998	-	62	67.164	Rhinopithecus_bieti
ENSPNAG00000008633	slirp	87	55.814	ENSRBIG00000035817	-	79	55.814	Rhinopithecus_bieti
ENSPNAG00000008633	slirp	88	60.920	ENSRBIG00000032222	-	80	60.920	Rhinopithecus_bieti
ENSPNAG00000008633	slirp	68	68.657	ENSRROG00000017133	-	70	68.657	Rhinopithecus_roxellana
ENSPNAG00000008633	slirp	72	67.606	ENSRROG00000041312	-	70	67.606	Rhinopithecus_roxellana
ENSPNAG00000008633	slirp	66	70.769	ENSRROG00000035604	-	65	70.769	Rhinopithecus_roxellana
ENSPNAG00000008633	slirp	88	60.920	ENSRROG00000036656	-	80	60.920	Rhinopithecus_roxellana
ENSPNAG00000008633	slirp	81	61.250	ENSSBOG00000020014	SLIRP	77	64.865	Saimiri_boliviensis_boliviensis
ENSPNAG00000008633	slirp	100	69.697	ENSSFOG00015011165	slirp	100	69.697	Scleropages_formosus
ENSPNAG00000008633	slirp	99	50.000	ENSSMAG00000012930	slirp	98	50.000	Scophthalmus_maximus
ENSPNAG00000008633	slirp	99	78.571	ENSSDUG00000021883	slirp	64	78.571	Seriola_dumerili
ENSPNAG00000008633	slirp	99	78.571	ENSSLDG00000023136	slirp	89	78.571	Seriola_lalandi_dorsalis
ENSPNAG00000008633	slirp	83	67.442	ENSSPUG00000009346	SLIRP	88	67.442	Sphenodon_punctatus
ENSPNAG00000008633	slirp	99	71.429	ENSSPAG00000013477	slirp	98	71.429	Stegastes_partitus
ENSPNAG00000008633	slirp	90	58.889	ENSSSCG00000028167	SLIRP	81	58.889	Sus_scrofa
ENSPNAG00000008633	slirp	79	58.974	ENSTGUG00000012337	SLIRP	88	51.613	Taeniopygia_guttata
ENSPNAG00000008633	slirp	100	70.000	ENSTRUG00000020127	slirp	99	70.000	Takifugu_rubripes
ENSPNAG00000008633	slirp	89	58.427	ENSUAMG00000022445	SLIRP	80	58.427	Ursus_americanus
ENSPNAG00000008633	slirp	89	59.551	ENSUMAG00000007166	SLIRP	80	59.551	Ursus_maritimus
ENSPNAG00000008633	slirp	89	55.682	ENSVPAG00000001781	SLIRP	81	55.682	Vicugna_pacos
ENSPNAG00000008633	slirp	90	58.889	ENSVVUG00000004436	SLIRP	81	58.889	Vulpes_vulpes
ENSPNAG00000008633	slirp	82	76.543	ENSXETG00000030343	SLIRP	91	76.543	Xenopus_tropicalis
ENSPNAG00000008633	slirp	99	69.388	ENSXCOG00000009422	slirp	98	69.388	Xiphophorus_couchianus
ENSPNAG00000008633	slirp	99	71.429	ENSXMAG00000015655	slirp	98	71.429	Xiphophorus_maculatus