EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000008659 (Gene tree)
Gene ID: 108425882
Gene Symbol: tsr1
Alias: fc52b09|wu:fc52b09|zgc:123319
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 14199 bases
Position: chrKV575321.1:2222356-2236554
Accession: 108425882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000024166	AARP2CN	PF08142.12	1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000010808	-	2945	XM_017694909	ENSPNAP00000024166	840 (aa)	XP_017550398	UPI00081479FB

Gene Model

Click here to download ENSPNAG00000008659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000008659's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000008659	tsr1	98	54.788	ENSG00000167721	TSR1	98	54.612	Homo_sapiens
ENSPNAG00000008659	tsr1	100	77.170	ENSAPOG00000020891	tsr1	100	77.051	Acanthochromis_polyacanthus
ENSPNAG00000008659	tsr1	99	53.174	ENSAMEG00000007599	TSR1	99	51.459	Ailuropoda_melanoleuca
ENSPNAG00000008659	tsr1	100	74.048	ENSACIG00000007090	tsr1	100	74.109	Amphilophus_citrinellus
ENSPNAG00000008659	tsr1	100	76.905	ENSAOCG00000023284	tsr1	100	76.548	Amphiprion_ocellaris
ENSPNAG00000008659	tsr1	93	76.726	ENSAPEG00000008452	tsr1	100	76.215	Amphiprion_percula
ENSPNAG00000008659	tsr1	100	74.882	ENSATEG00000021961	tsr1	100	74.823	Anabas_testudineus
ENSPNAG00000008659	tsr1	91	58.106	ENSAPLG00000013422	TSR1	100	58.366	Anas_platyrhynchos
ENSPNAG00000008659	tsr1	71	49.505	ENSACAG00000000859	TSR1	92	47.603	Anolis_carolinensis
ENSPNAG00000008659	tsr1	98	54.424	ENSANAG00000031071	TSR1	98	55.030	Aotus_nancymaae
ENSPNAG00000008659	tsr1	100	75.476	ENSACLG00000007595	tsr1	99	75.476	Astatotilapia_calliptera
ENSPNAG00000008659	tsr1	50	86.085	ENSAMXG00000008470	tsr1	89	86.085	Astyanax_mexicanus
ENSPNAG00000008659	tsr1	99	55.210	ENSBTAG00000004225	TSR1	99	54.850	Bos_taurus
ENSPNAG00000008659	tsr1	97	53.827	ENSCJAG00000012456	TSR1	98	54.313	Callithrix_jacchus
ENSPNAG00000008659	tsr1	89	52.243	ENSCAFG00000019273	-	100	54.545	Canis_familiaris
ENSPNAG00000008659	tsr1	99	54.187	ENSCAFG00000002106	-	99	53.088	Canis_familiaris
ENSPNAG00000008659	tsr1	99	53.828	ENSCAFG00020009728	TSR1	99	52.732	Canis_lupus_dingo
ENSPNAG00000008659	tsr1	99	55.449	ENSCHIG00000023935	TSR1	99	54.970	Capra_hircus
ENSPNAG00000008659	tsr1	99	54.361	ENSTSYG00000005468	TSR1	99	54.241	Carlito_syrichta
ENSPNAG00000008659	tsr1	92	53.935	ENSCPOG00000014833	TSR1	99	53.325	Cavia_porcellus
ENSPNAG00000008659	tsr1	92	53.085	ENSCCAG00000028962	TSR1	98	53.599	Cebus_capucinus
ENSPNAG00000008659	tsr1	98	54.909	ENSCATG00000044262	TSR1	98	54.545	Cercocebus_atys
ENSPNAG00000008659	tsr1	99	54.132	ENSCLAG00000005567	TSR1	99	53.929	Chinchilla_lanigera
ENSPNAG00000008659	tsr1	98	55.030	ENSCSAG00000013788	TSR1	98	54.667	Chlorocebus_sabaeus
ENSPNAG00000008659	tsr1	98	56.010	ENSCPBG00000020363	TSR1	98	56.132	Chrysemys_picta_bellii
ENSPNAG00000008659	tsr1	96	44.957	ENSCING00000020658	-	99	44.756	Ciona_intestinalis
ENSPNAG00000008659	tsr1	96	44.172	ENSCSAVG00000001875	-	99	43.659	Ciona_savignyi
ENSPNAG00000008659	tsr1	88	70.608	ENSCANG00000033056	TSR1	95	70.608	Colobus_angolensis_palliatus
ENSPNAG00000008659	tsr1	99	54.241	ENSCGRG00001023942	Tsr1	99	54.122	Cricetulus_griseus_chok1gshd
ENSPNAG00000008659	tsr1	99	49.222	ENSCGRG00000013015	Tsr1	99	49.820	Cricetulus_griseus_crigri
ENSPNAG00000008659	tsr1	99	73.589	ENSCSEG00000013009	tsr1	99	73.469	Cynoglossus_semilaevis
ENSPNAG00000008659	tsr1	100	73.571	ENSCVAG00000000506	tsr1	100	73.127	Cyprinodon_variegatus
ENSPNAG00000008659	tsr1	100	80.355	ENSDARG00000007744	tsr1	100	80.473	Danio_rerio
ENSPNAG00000008659	tsr1	99	55.210	ENSDNOG00000004715	TSR1	99	55.977	Dasypus_novemcinctus
ENSPNAG00000008659	tsr1	99	53.644	ENSDORG00000016371	-	99	53.047	Dipodomys_ordii
ENSPNAG00000008659	tsr1	96	47.466	ENSDORG00000023234	-	99	46.724	Dipodomys_ordii
ENSPNAG00000008659	tsr1	96	43.293	FBgn0037073	Tsr1	96	43.220	Drosophila_melanogaster
ENSPNAG00000008659	tsr1	86	68.197	ENSETEG00000017534	TSR1	88	68.197	Echinops_telfairi
ENSPNAG00000008659	tsr1	95	51.304	ENSEBUG00000013731	TSR1	98	49.146	Eptatretus_burgeri
ENSPNAG00000008659	tsr1	99	54.796	ENSEASG00005009302	TSR1	97	55.276	Equus_asinus_asinus
ENSPNAG00000008659	tsr1	99	54.916	ENSECAG00000009114	TSR1	99	55.276	Equus_caballus
ENSPNAG00000008659	tsr1	100	73.571	ENSELUG00000020984	tsr1	96	73.722	Esox_lucius
ENSPNAG00000008659	tsr1	99	54.132	ENSFCAG00000006313	TSR1	99	53.892	Felis_catus
ENSPNAG00000008659	tsr1	99	58.134	ENSFALG00000006532	TSR1	99	58.781	Ficedula_albicollis
ENSPNAG00000008659	tsr1	99	53.772	ENSFDAG00000006038	TSR1	99	53.174	Fukomys_damarensis
ENSPNAG00000008659	tsr1	100	73.690	ENSFHEG00000003626	tsr1	99	73.690	Fundulus_heteroclitus
ENSPNAG00000008659	tsr1	100	69.194	ENSGMOG00000010336	tsr1	100	68.929	Gadus_morhua
ENSPNAG00000008659	tsr1	99	73.063	ENSGAFG00000012993	tsr1	99	73.421	Gambusia_affinis
ENSPNAG00000008659	tsr1	99	73.008	ENSGACG00000010843	tsr1	99	72.976	Gasterosteus_aculeatus
ENSPNAG00000008659	tsr1	98	55.836	ENSGAGG00000025619	-	99	55.728	Gopherus_agassizii
ENSPNAG00000008659	tsr1	98	54.909	ENSGGOG00000001704	TSR1	98	54.733	Gorilla_gorilla
ENSPNAG00000008659	tsr1	100	75.595	ENSHBUG00000017904	tsr1	100	75.448	Haplochromis_burtoni
ENSPNAG00000008659	tsr1	99	53.644	ENSHGLG00000012806	-	99	53.286	Heterocephalus_glaber_female
ENSPNAG00000008659	tsr1	96	46.972	ENSHGLG00000015688	-	98	46.354	Heterocephalus_glaber_female
ENSPNAG00000008659	tsr1	99	53.644	ENSHGLG00100015392	TSR1	99	53.286	Heterocephalus_glaber_male
ENSPNAG00000008659	tsr1	99	73.861	ENSHCOG00000001432	tsr1	99	73.381	Hippocampus_comes
ENSPNAG00000008659	tsr1	100	83.829	ENSIPUG00000004618	tsr1	100	83.353	Ictalurus_punctatus
ENSPNAG00000008659	tsr1	99	54.251	ENSSTOG00000011819	TSR1	99	54.731	Ictidomys_tridecemlineatus
ENSPNAG00000008659	tsr1	90	52.375	ENSJJAG00000019505	Tsr1	94	51.910	Jaculus_jaculus
ENSPNAG00000008659	tsr1	100	73.810	ENSKMAG00000005763	tsr1	99	73.571	Kryptolebias_marmoratus
ENSPNAG00000008659	tsr1	100	74.673	ENSLBEG00000021823	tsr1	99	74.673	Labrus_bergylta
ENSPNAG00000008659	tsr1	100	58.796	ENSLACG00000002197	TSR1	100	58.323	Latimeria_chalumnae
ENSPNAG00000008659	tsr1	90	84.211	ENSLOCG00000006491	TSR1	98	84.211	Lepisosteus_oculatus
ENSPNAG00000008659	tsr1	98	55.152	ENSMFAG00000021330	TSR1	98	54.788	Macaca_fascicularis
ENSPNAG00000008659	tsr1	98	55.030	ENSMMUG00000017519	TSR1	98	54.667	Macaca_mulatta
ENSPNAG00000008659	tsr1	98	54.976	ENSMNEG00000031382	TSR1	98	54.612	Macaca_nemestrina
ENSPNAG00000008659	tsr1	98	54.788	ENSMLEG00000036733	TSR1	98	54.424	Mandrillus_leucophaeus
ENSPNAG00000008659	tsr1	100	75.059	ENSMAMG00000017918	tsr1	99	74.823	Mastacembelus_armatus
ENSPNAG00000008659	tsr1	100	75.743	ENSMZEG00005007477	tsr1	100	75.505	Maylandia_zebra
ENSPNAG00000008659	tsr1	99	56.595	ENSMGAG00000005576	TSR1	99	57.194	Meleagris_gallopavo
ENSPNAG00000008659	tsr1	99	54.982	ENSMICG00000012943	TSR1	99	54.622	Microcebus_murinus
ENSPNAG00000008659	tsr1	99	53.461	ENSMOCG00000022764	Tsr1	99	53.461	Microtus_ochrogaster
ENSPNAG00000008659	tsr1	100	74.881	ENSMMOG00000014280	tsr1	100	74.048	Mola_mola
ENSPNAG00000008659	tsr1	99	55.781	ENSMODG00000010658	TSR1	99	54.923	Monodelphis_domestica
ENSPNAG00000008659	tsr1	100	74.286	ENSMALG00000011681	tsr1	100	74.286	Monopterus_albus
ENSPNAG00000008659	tsr1	99	54.122	MGP_CAROLIEiJ_G0016727	Tsr1	99	53.800	Mus_caroli
ENSPNAG00000008659	tsr1	99	54.719	ENSMUSG00000038335	Tsr1	99	54.276	Mus_musculus
ENSPNAG00000008659	tsr1	99	54.611	MGP_PahariEiJ_G0017864	Tsr1	99	54.286	Mus_pahari
ENSPNAG00000008659	tsr1	99	54.545	MGP_SPRETEiJ_G0017570	Tsr1	99	54.221	Mus_spretus
ENSPNAG00000008659	tsr1	81	56.204	ENSMPUG00000013000	TSR1	100	55.636	Mustela_putorius_furo
ENSPNAG00000008659	tsr1	98	55.461	ENSMLUG00000003505	TSR1	99	55.218	Myotis_lucifugus
ENSPNAG00000008659	tsr1	100	76.071	ENSNBRG00000020728	tsr1	99	76.071	Neolamprologus_brichardi
ENSPNAG00000008659	tsr1	98	47.259	ENSNLEG00000017184	TSR1	95	67.761	Nomascus_leucogenys
ENSPNAG00000008659	tsr1	99	51.316	ENSMEUG00000015828	TSR1	99	52.153	Notamacropus_eugenii
ENSPNAG00000008659	tsr1	100	75.476	ENSONIG00000013131	tsr1	100	75.238	Oreochromis_niloticus
ENSPNAG00000008659	tsr1	95	49.075	ENSOANG00000008637	TSR1	100	67.042	Ornithorhynchus_anatinus
ENSPNAG00000008659	tsr1	99	54.600	ENSOCUG00000014256	TSR1	99	54.958	Oryctolagus_cuniculus
ENSPNAG00000008659	tsr1	100	74.405	ENSORLG00000004926	tsr1	99	74.405	Oryzias_latipes
ENSPNAG00000008659	tsr1	100	74.405	ENSORLG00020008792	tsr1	99	74.524	Oryzias_latipes_hni
ENSPNAG00000008659	tsr1	100	74.762	ENSORLG00015013838	tsr1	99	74.762	Oryzias_latipes_hsok
ENSPNAG00000008659	tsr1	100	73.603	ENSOMEG00000004830	tsr1	99	73.603	Oryzias_melastigma
ENSPNAG00000008659	tsr1	99	54.869	ENSOGAG00000004492	TSR1	99	55.687	Otolemur_garnettii
ENSPNAG00000008659	tsr1	99	55.329	ENSOARG00000015437	TSR1	97	54.850	Ovis_aries
ENSPNAG00000008659	tsr1	98	54.788	ENSPPAG00000036355	TSR1	98	54.612	Pan_paniscus
ENSPNAG00000008659	tsr1	99	54.012	ENSPPRG00000015519	-	99	53.929	Panthera_pardus
ENSPNAG00000008659	tsr1	99	54.012	ENSPTIG00000010608	TSR1	99	53.929	Panthera_tigris_altaica
ENSPNAG00000008659	tsr1	98	54.788	ENSPTRG00000008547	TSR1	98	54.612	Pan_troglodytes
ENSPNAG00000008659	tsr1	98	52.727	ENSPANG00000024463	TSR1	98	52.485	Papio_anubis
ENSPNAG00000008659	tsr1	99	71.976	ENSPKIG00000013972	tsr1	99	72.302	Paramormyrops_kingsleyae
ENSPNAG00000008659	tsr1	87	55.450	ENSPSIG00000018258	TSR1	99	55.177	Pelodiscus_sinensis
ENSPNAG00000008659	tsr1	99	73.031	ENSPMGG00000011577	tsr1	99	72.792	Periophthalmus_magnuspinnatus
ENSPNAG00000008659	tsr1	99	52.751	ENSPEMG00000018033	Tsr1	99	53.589	Peromyscus_maniculatus_bairdii
ENSPNAG00000008659	tsr1	99	55.795	ENSPCIG00000009357	TSR1	97	55.795	Phascolarctos_cinereus
ENSPNAG00000008659	tsr1	99	73.063	ENSPFOG00000004483	TSR1	99	73.540	Poecilia_formosa
ENSPNAG00000008659	tsr1	99	73.571	ENSPLAG00000022320	tsr1	99	73.690	Poecilia_latipinna
ENSPNAG00000008659	tsr1	99	73.722	ENSPMEG00000004577	tsr1	99	73.690	Poecilia_mexicana
ENSPNAG00000008659	tsr1	97	74.174	ENSPREG00000010354	tsr1	96	72.859	Poecilia_reticulata
ENSPNAG00000008659	tsr1	98	49.640	ENSPPYG00000007792	TSR1	98	49.281	Pongo_abelii
ENSPNAG00000008659	tsr1	51	67.442	ENSPCAG00000012973	-	71	68.293	Procavia_capensis
ENSPNAG00000008659	tsr1	99	54.958	ENSPCOG00000017928	TSR1	99	54.742	Propithecus_coquereli
ENSPNAG00000008659	tsr1	99	53.717	ENSPVAG00000002162	TSR1	99	53.717	Pteropus_vampyrus
ENSPNAG00000008659	tsr1	100	75.714	ENSPNYG00000016163	tsr1	99	75.714	Pundamilia_nyererei
ENSPNAG00000008659	tsr1	99	54.436	ENSRNOG00000002980	Tsr1	99	53.754	Rattus_norvegicus
ENSPNAG00000008659	tsr1	98	54.854	ENSRBIG00000040016	TSR1	98	54.667	Rhinopithecus_bieti
ENSPNAG00000008659	tsr1	98	54.854	ENSRROG00000030361	TSR1	98	54.667	Rhinopithecus_roxellana
ENSPNAG00000008659	tsr1	98	54.479	ENSSBOG00000020785	TSR1	98	54.964	Saimiri_boliviensis_boliviensis
ENSPNAG00000008659	tsr1	99	56.033	ENSSHAG00000011394	TSR1	99	56.340	Sarcophilus_harrisii
ENSPNAG00000008659	tsr1	100	72.857	ENSSFOG00015005455	tsr1	100	72.381	Scleropages_formosus
ENSPNAG00000008659	tsr1	99	74.940	ENSSMAG00000009504	tsr1	99	74.940	Scophthalmus_maximus
ENSPNAG00000008659	tsr1	99	76.407	ENSSDUG00000012074	tsr1	99	76.647	Seriola_dumerili
ENSPNAG00000008659	tsr1	99	76.647	ENSSLDG00000002031	tsr1	99	76.886	Seriola_lalandi_dorsalis
ENSPNAG00000008659	tsr1	93	56.574	ENSSARG00000000759	TSR1	93	56.574	Sorex_araneus
ENSPNAG00000008659	tsr1	99	57.895	ENSSPUG00000007042	TSR1	99	57.775	Sphenodon_punctatus
ENSPNAG00000008659	tsr1	99	75.476	ENSSPAG00000021951	tsr1	99	75.476	Stegastes_partitus
ENSPNAG00000008659	tsr1	99	54.731	ENSSSCG00000038534	TSR1	99	54.491	Sus_scrofa
ENSPNAG00000008659	tsr1	90	59.709	ENSTGUG00000005883	TSR1	100	59.313	Taeniopygia_guttata
ENSPNAG00000008659	tsr1	99	73.747	ENSTRUG00000004665	tsr1	99	73.628	Takifugu_rubripes
ENSPNAG00000008659	tsr1	99	73.558	ENSTNIG00000016196	tsr1	100	73.558	Tetraodon_nigroviridis
ENSPNAG00000008659	tsr1	67	71.538	ENSTBEG00000015275	-	66	71.538	Tupaia_belangeri
ENSPNAG00000008659	tsr1	99	55.024	ENSTTRG00000001177	TSR1	99	54.426	Tursiops_truncatus
ENSPNAG00000008659	tsr1	99	54.251	ENSUAMG00000025160	TSR1	99	54.067	Ursus_americanus
ENSPNAG00000008659	tsr1	95	53.779	ENSUMAG00000009294	TSR1	98	53.350	Ursus_maritimus
ENSPNAG00000008659	tsr1	83	49.220	ENSVPAG00000000228	TSR1	99	47.943	Vicugna_pacos
ENSPNAG00000008659	tsr1	99	54.187	ENSVVUG00000021767	TSR1	99	53.088	Vulpes_vulpes
ENSPNAG00000008659	tsr1	100	53.412	ENSXETG00000023797	tsr1	100	52.886	Xenopus_tropicalis
ENSPNAG00000008659	tsr1	99	73.508	ENSXCOG00000009635	tsr1	99	73.508	Xiphophorus_couchianus
ENSPNAG00000008659	tsr1	99	74.224	ENSXMAG00000001397	tsr1	97	73.508	Xiphophorus_maculatus