EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000008683 (Gene tree)
Gene ID: 108437378
Gene Symbol: snrpd3l
Alias: wu:fa18f04|zgc:56125
Full Name: small nuclear ribonucleoprotein Sm D3
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 4241 bases
Position: chrKV575293.1:2063162-2067402
Accession: 108437378
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000024183	LSM	PF01423.22	1.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000010757	-	1057	XM_017714429	ENSPNAP00000024183	128 (aa)	XP_017569918	UPI000814AD65

Gene Model

Click here to download ENSPNAG00000008683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000008683's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000008683	snrpd3l	100	95.312	ENSPNAG00000010547	snrpd3	100	95.312
ENSPNAG00000008683	snrpd3l	88	30.088	ENSPNAG00000016598	lsm4	54	36.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000008683	snrpd3l	100	94.531	ENSG00000100028	SNRPD3	98	96.721	Homo_sapiens
ENSPNAG00000008683	snrpd3l	100	96.094	ENSAPOG00000007512	snrpd3l	100	96.094	Acanthochromis_polyacanthus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSAMEG00000013935	SNRPD3	100	94.531	Ailuropoda_melanoleuca
ENSPNAG00000008683	snrpd3l	100	96.094	ENSACIG00000008871	snrpd3l	100	96.094	Amphilophus_citrinellus
ENSPNAG00000008683	snrpd3l	83	97.170	ENSAOCG00000016759	-	98	97.170	Amphiprion_ocellaris
ENSPNAG00000008683	snrpd3l	100	96.094	ENSAOCG00000022442	-	100	96.094	Amphiprion_ocellaris
ENSPNAG00000008683	snrpd3l	100	96.094	ENSAOCG00000016743	snrpd3l	100	96.094	Amphiprion_ocellaris
ENSPNAG00000008683	snrpd3l	100	96.094	ENSAOCG00000008497	SNRPD3	100	96.094	Amphiprion_ocellaris
ENSPNAG00000008683	snrpd3l	100	96.094	ENSAPEG00000006273	snrpd3l	100	96.094	Amphiprion_percula
ENSPNAG00000008683	snrpd3l	83	97.170	ENSAPEG00000006260	-	98	97.170	Amphiprion_percula
ENSPNAG00000008683	snrpd3l	100	96.094	ENSATEG00000020556	snrpd3l	91	96.094	Anabas_testudineus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSAPLG00000008670	SNRPD3	100	94.531	Anas_platyrhynchos
ENSPNAG00000008683	snrpd3l	100	94.531	ENSANAG00000026106	SNRPD3	100	94.531	Aotus_nancymaae
ENSPNAG00000008683	snrpd3l	100	96.094	ENSACLG00000021295	snrpd3l	100	96.094	Astatotilapia_calliptera
ENSPNAG00000008683	snrpd3l	100	99.219	ENSAMXG00000038984	snrpd3l	100	99.219	Astyanax_mexicanus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSBTAG00000021262	SNRPD3	100	94.531	Bos_taurus
ENSPNAG00000008683	snrpd3l	89	64.348	WBGene00004914	snr-1	63	74.118	Caenorhabditis_elegans
ENSPNAG00000008683	snrpd3l	100	94.531	ENSCJAG00000009630	SNRPD3	100	94.531	Callithrix_jacchus
ENSPNAG00000008683	snrpd3l	100	93.750	ENSCAFG00000017258	-	100	90.625	Canis_familiaris
ENSPNAG00000008683	snrpd3l	100	94.531	ENSCAFG00000013864	-	100	94.531	Canis_familiaris
ENSPNAG00000008683	snrpd3l	100	94.531	ENSCAFG00020007165	-	100	94.531	Canis_lupus_dingo
ENSPNAG00000008683	snrpd3l	100	94.531	ENSCHIG00000000057	SNRPD3	100	94.531	Capra_hircus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSTSYG00000007649	SNRPD3	100	94.531	Carlito_syrichta
ENSPNAG00000008683	snrpd3l	100	94.531	ENSCAPG00000016432	-	100	94.531	Cavia_aperea
ENSPNAG00000008683	snrpd3l	100	94.531	ENSCPOG00000033102	-	100	94.531	Cavia_porcellus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSCCAG00000035006	SNRPD3	100	94.531	Cebus_capucinus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSCATG00000038878	SNRPD3	100	94.531	Cercocebus_atys
ENSPNAG00000008683	snrpd3l	100	94.531	ENSCLAG00000011403	SNRPD3	100	94.531	Chinchilla_lanigera
ENSPNAG00000008683	snrpd3l	100	94.531	ENSCSAG00000010694	SNRPD3	100	94.531	Chlorocebus_sabaeus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSCPBG00000002065	SNRPD3	100	94.531	Chrysemys_picta_bellii
ENSPNAG00000008683	snrpd3l	84	77.570	ENSCSAVG00000004708	-	80	76.636	Ciona_savignyi
ENSPNAG00000008683	snrpd3l	100	94.531	ENSCANG00000032106	SNRPD3	100	94.531	Colobus_angolensis_palliatus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSCGRG00001021990	Snrpd3	100	94.531	Cricetulus_griseus_chok1gshd
ENSPNAG00000008683	snrpd3l	100	94.531	ENSCGRG00000004280	Snrpd3	100	94.531	Cricetulus_griseus_crigri
ENSPNAG00000008683	snrpd3l	100	94.531	ENSCVAG00000001276	snrpd3l	100	89.062	Cyprinodon_variegatus
ENSPNAG00000008683	snrpd3l	100	92.969	ENSDARG00000013800	snrpd3	100	87.500	Danio_rerio
ENSPNAG00000008683	snrpd3l	100	98.438	ENSDARG00000076283	snrpd3l	100	98.438	Danio_rerio
ENSPNAG00000008683	snrpd3l	100	94.531	ENSDNOG00000047424	-	100	94.531	Dasypus_novemcinctus
ENSPNAG00000008683	snrpd3l	100	84.733	ENSDNOG00000018004	-	100	82.443	Dasypus_novemcinctus
ENSPNAG00000008683	snrpd3l	97	72.581	ENSDNOG00000042638	-	100	70.968	Dasypus_novemcinctus
ENSPNAG00000008683	snrpd3l	88	85.714	ENSDORG00000002800	-	100	83.036	Dipodomys_ordii
ENSPNAG00000008683	snrpd3l	100	69.531	ENSDORG00000027169	-	100	67.188	Dipodomys_ordii
ENSPNAG00000008683	snrpd3l	100	79.688	ENSDORG00000027706	-	100	77.344	Dipodomys_ordii
ENSPNAG00000008683	snrpd3l	83	82.075	FBgn0023167	SmD3	71	81.308	Drosophila_melanogaster
ENSPNAG00000008683	snrpd3l	100	94.531	ENSEASG00005000273	SNRPD3	100	94.531	Equus_asinus_asinus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSECAG00000023316	SNRPD3	100	94.531	Equus_caballus
ENSPNAG00000008683	snrpd3l	100	89.062	ENSEEUG00000015518	SNRPD3	100	91.406	Erinaceus_europaeus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSELUG00000001854	snrpd3	100	89.062	Esox_lucius
ENSPNAG00000008683	snrpd3l	100	96.094	ENSELUG00000010092	snrpd3l	100	96.094	Esox_lucius
ENSPNAG00000008683	snrpd3l	100	94.531	ENSFCAG00000001512	SNRPD3	100	94.531	Felis_catus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSFALG00000007303	SNRPD3	100	94.531	Ficedula_albicollis
ENSPNAG00000008683	snrpd3l	100	94.531	ENSFDAG00000010772	SNRPD3	100	94.531	Fukomys_damarensis
ENSPNAG00000008683	snrpd3l	100	96.094	ENSFHEG00000010754	snrpd3l	100	96.094	Fundulus_heteroclitus
ENSPNAG00000008683	snrpd3l	100	94.574	ENSGMOG00000008469	snrpd3l	100	89.147	Gadus_morhua
ENSPNAG00000008683	snrpd3l	100	94.531	ENSGALG00000006596	SNRPD3	100	94.531	Gallus_gallus
ENSPNAG00000008683	snrpd3l	83	97.170	ENSGAFG00000006661	snrpd3l	82	97.170	Gambusia_affinis
ENSPNAG00000008683	snrpd3l	100	94.574	ENSGACG00000017533	snrpd3l	100	89.147	Gasterosteus_aculeatus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSGAGG00000023325	SNRPD3	100	94.531	Gopherus_agassizii
ENSPNAG00000008683	snrpd3l	100	94.531	ENSGGOG00000015640	SNRPD3	100	94.531	Gorilla_gorilla
ENSPNAG00000008683	snrpd3l	100	96.094	ENSHBUG00000001332	snrpd3l	100	96.094	Haplochromis_burtoni
ENSPNAG00000008683	snrpd3l	99	90.551	ENSHGLG00000009844	-	99	88.189	Heterocephalus_glaber_female
ENSPNAG00000008683	snrpd3l	100	94.531	ENSHGLG00000016496	SNRPD3	100	94.531	Heterocephalus_glaber_female
ENSPNAG00000008683	snrpd3l	99	90.551	ENSHGLG00100011326	-	99	88.189	Heterocephalus_glaber_male
ENSPNAG00000008683	snrpd3l	100	94.531	ENSHGLG00100019304	SNRPD3	100	94.531	Heterocephalus_glaber_male
ENSPNAG00000008683	snrpd3l	100	94.531	ENSHCOG00000014396	snrpd3l	100	89.062	Hippocampus_comes
ENSPNAG00000008683	snrpd3l	100	96.875	ENSIPUG00000003083	snrpd3	100	96.875	Ictalurus_punctatus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSSTOG00000025674	SNRPD3	100	94.531	Ictidomys_tridecemlineatus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSJJAG00000013303	Snrpd3	100	94.531	Jaculus_jaculus
ENSPNAG00000008683	snrpd3l	100	96.094	ENSKMAG00000012493	snrpd3l	100	96.094	Kryptolebias_marmoratus
ENSPNAG00000008683	snrpd3l	100	96.094	ENSLBEG00000003202	snrpd3l	100	96.094	Labrus_bergylta
ENSPNAG00000008683	snrpd3l	100	93.750	ENSLACG00000015192	SNRPD3	100	90.625	Latimeria_chalumnae
ENSPNAG00000008683	snrpd3l	100	96.094	ENSLOCG00000006978	snrpd3	100	96.094	Lepisosteus_oculatus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSLAFG00000028180	SNRPD3	100	94.531	Loxodonta_africana
ENSPNAG00000008683	snrpd3l	100	94.531	ENSMFAG00000033628	SNRPD3	100	94.531	Macaca_fascicularis
ENSPNAG00000008683	snrpd3l	100	94.531	ENSMMUG00000000264	SNRPD3	100	94.531	Macaca_mulatta
ENSPNAG00000008683	snrpd3l	100	94.531	ENSMNEG00000020857	SNRPD3	100	94.531	Macaca_nemestrina
ENSPNAG00000008683	snrpd3l	100	94.531	ENSMLEG00000037548	SNRPD3	100	94.531	Mandrillus_leucophaeus
ENSPNAG00000008683	snrpd3l	100	96.094	ENSMZEG00005017664	snrpd3l	100	96.094	Maylandia_zebra
ENSPNAG00000008683	snrpd3l	100	94.531	ENSMAUG00000021393	Snrpd3	100	94.531	Mesocricetus_auratus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSMICG00000034782	SNRPD3	100	94.531	Microcebus_murinus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSMOCG00000009361	Snrpd3	100	94.531	Microtus_ochrogaster
ENSPNAG00000008683	snrpd3l	83	97.170	ENSMMOG00000020985	snrpd3l	67	97.170	Mola_mola
ENSPNAG00000008683	snrpd3l	100	94.531	ENSMODG00000004024	SNRPD3	100	94.531	Monodelphis_domestica
ENSPNAG00000008683	snrpd3l	100	96.094	ENSMALG00000013334	snrpd3l	100	96.094	Monopterus_albus
ENSPNAG00000008683	snrpd3l	100	94.531	MGP_CAROLIEiJ_G0015441	Snrpd3	100	94.531	Mus_caroli
ENSPNAG00000008683	snrpd3l	100	94.531	ENSMUSG00000020180	Snrpd3	100	94.531	Mus_musculus
ENSPNAG00000008683	snrpd3l	100	94.531	MGP_PahariEiJ_G0030857	Snrpd3	100	94.531	Mus_pahari
ENSPNAG00000008683	snrpd3l	100	94.531	MGP_SPRETEiJ_G0016254	Snrpd3	100	94.531	Mus_spretus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSMPUG00000002889	SNRPD3	100	94.531	Mustela_putorius_furo
ENSPNAG00000008683	snrpd3l	100	94.531	ENSMLUG00000009838	SNRPD3	100	94.531	Myotis_lucifugus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSNGAG00000010328	Snrpd3	100	94.531	Nannospalax_galili
ENSPNAG00000008683	snrpd3l	100	96.094	ENSNBRG00000020307	snrpd3l	100	96.094	Neolamprologus_brichardi
ENSPNAG00000008683	snrpd3l	100	94.531	ENSNLEG00000035757	SNRPD3	100	94.531	Nomascus_leucogenys
ENSPNAG00000008683	snrpd3l	100	94.531	ENSMEUG00000003772	SNRPD3	100	94.531	Notamacropus_eugenii
ENSPNAG00000008683	snrpd3l	100	94.531	ENSOPRG00000005763	SNRPD3	100	94.531	Ochotona_princeps
ENSPNAG00000008683	snrpd3l	100	91.406	ENSODEG00000020162	-	100	88.281	Octodon_degus
ENSPNAG00000008683	snrpd3l	100	93.750	ENSODEG00000019354	-	100	90.625	Octodon_degus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSODEG00000008064	-	100	94.531	Octodon_degus
ENSPNAG00000008683	snrpd3l	100	96.094	ENSONIG00000003828	snrpd3l	100	96.094	Oreochromis_niloticus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSOANG00000002463	SNRPD3	100	94.531	Ornithorhynchus_anatinus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSOCUG00000004845	SNRPD3	100	94.531	Oryctolagus_cuniculus
ENSPNAG00000008683	snrpd3l	100	96.094	ENSORLG00000010586	snrpd3l	100	96.094	Oryzias_latipes
ENSPNAG00000008683	snrpd3l	100	96.094	ENSORLG00020011769	snrpd3l	100	96.094	Oryzias_latipes_hni
ENSPNAG00000008683	snrpd3l	100	96.094	ENSORLG00015022940	snrpd3l	100	96.094	Oryzias_latipes_hsok
ENSPNAG00000008683	snrpd3l	100	96.094	ENSOMEG00000022734	snrpd3l	100	96.094	Oryzias_melastigma
ENSPNAG00000008683	snrpd3l	100	94.531	ENSOGAG00000012708	SNRPD3	100	94.531	Otolemur_garnettii
ENSPNAG00000008683	snrpd3l	100	94.531	ENSOARG00000013984	SNRPD3	100	94.531	Ovis_aries
ENSPNAG00000008683	snrpd3l	100	94.531	ENSPPAG00000039191	SNRPD3	100	94.531	Pan_paniscus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSPPRG00000001470	SNRPD3	100	94.531	Panthera_pardus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSPTIG00000016610	SNRPD3	100	94.531	Panthera_tigris_altaica
ENSPNAG00000008683	snrpd3l	100	94.531	ENSPTRG00000014176	SNRPD3	100	94.531	Pan_troglodytes
ENSPNAG00000008683	snrpd3l	100	94.531	ENSPANG00000009279	SNRPD3	100	94.531	Papio_anubis
ENSPNAG00000008683	snrpd3l	100	96.094	ENSPKIG00000006412	snrpd3l	100	96.094	Paramormyrops_kingsleyae
ENSPNAG00000008683	snrpd3l	100	92.969	ENSPSIG00000010022	-	100	89.844	Pelodiscus_sinensis
ENSPNAG00000008683	snrpd3l	84	96.296	ENSPMGG00000004486	snrpd3l	87	96.262	Periophthalmus_magnuspinnatus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSPCIG00000010910	SNRPD3	84	94.531	Phascolarctos_cinereus
ENSPNAG00000008683	snrpd3l	100	96.094	ENSPFOG00000019673	snrpd3l	100	96.094	Poecilia_formosa
ENSPNAG00000008683	snrpd3l	100	96.094	ENSPLAG00000023249	snrpd3l	100	96.094	Poecilia_latipinna
ENSPNAG00000008683	snrpd3l	100	96.094	ENSPMEG00000008482	snrpd3l	100	96.094	Poecilia_mexicana
ENSPNAG00000008683	snrpd3l	83	97.170	ENSPREG00000007532	snrpd3l	87	97.170	Poecilia_reticulata
ENSPNAG00000008683	snrpd3l	100	94.531	ENSPPYG00000011648	SNRPD3	100	94.531	Pongo_abelii
ENSPNAG00000008683	snrpd3l	100	94.531	ENSPCAG00000002065	SNRPD3	100	94.531	Procavia_capensis
ENSPNAG00000008683	snrpd3l	100	94.531	ENSPCOG00000011842	SNRPD3	100	94.531	Propithecus_coquereli
ENSPNAG00000008683	snrpd3l	100	93.750	ENSPVAG00000011405	SNRPD3	100	90.625	Pteropus_vampyrus
ENSPNAG00000008683	snrpd3l	100	96.094	ENSPNYG00000013344	snrpd3l	100	96.094	Pundamilia_nyererei
ENSPNAG00000008683	snrpd3l	100	94.531	ENSRNOG00000050410	Snrpd3	100	94.531	Rattus_norvegicus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSRBIG00000029017	SNRPD3	100	94.531	Rhinopithecus_bieti
ENSPNAG00000008683	snrpd3l	100	94.531	ENSRROG00000031152	SNRPD3	100	94.531	Rhinopithecus_roxellana
ENSPNAG00000008683	snrpd3l	74	48.421	YLR147C	SMD3	80	51.852	Saccharomyces_cerevisiae
ENSPNAG00000008683	snrpd3l	100	93.750	ENSSFOG00015014180	snrpd3l	100	88.281	Scleropages_formosus
ENSPNAG00000008683	snrpd3l	100	96.094	ENSSFOG00015007002	snrpd3l	100	96.094	Scleropages_formosus
ENSPNAG00000008683	snrpd3l	100	96.094	ENSSMAG00000019307	snrpd3l	100	96.094	Scophthalmus_maximus
ENSPNAG00000008683	snrpd3l	100	96.094	ENSSDUG00000006870	snrpd3l	100	96.094	Seriola_dumerili
ENSPNAG00000008683	snrpd3l	100	96.094	ENSSLDG00000022664	snrpd3l	100	96.094	Seriola_lalandi_dorsalis
ENSPNAG00000008683	snrpd3l	100	94.531	ENSSARG00000002357	SNRPD3	100	94.531	Sorex_araneus
ENSPNAG00000008683	snrpd3l	100	93.750	ENSSPUG00000014285	SNRPD3	100	91.406	Sphenodon_punctatus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSSSCG00000010058	SNRPD3	100	94.531	Sus_scrofa
ENSPNAG00000008683	snrpd3l	100	94.531	ENSTGUG00000010079	SNRPD3	100	94.531	Taeniopygia_guttata
ENSPNAG00000008683	snrpd3l	83	97.170	ENSTRUG00000023976	snrpd3l	90	97.170	Takifugu_rubripes
ENSPNAG00000008683	snrpd3l	100	96.094	ENSTNIG00000005323	snrpd3l	100	96.094	Tetraodon_nigroviridis
ENSPNAG00000008683	snrpd3l	100	94.531	ENSTBEG00000014334	SNRPD3	100	94.531	Tupaia_belangeri
ENSPNAG00000008683	snrpd3l	100	94.531	ENSTTRG00000006022	SNRPD3	100	94.531	Tursiops_truncatus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSUAMG00000010767	SNRPD3	100	94.531	Ursus_americanus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSUMAG00000001670	SNRPD3	100	94.531	Ursus_maritimus
ENSPNAG00000008683	snrpd3l	100	94.531	ENSVPAG00000000241	SNRPD3	100	94.531	Vicugna_pacos
ENSPNAG00000008683	snrpd3l	83	97.170	ENSVVUG00000019340	SNRPD3	53	97.170	Vulpes_vulpes
ENSPNAG00000008683	snrpd3l	100	79.231	ENSXETG00000024918	snrpd3	65	96.386	Xenopus_tropicalis
ENSPNAG00000008683	snrpd3l	100	96.094	ENSXCOG00000004795	snrpd3l	100	96.094	Xiphophorus_couchianus
ENSPNAG00000008683	snrpd3l	100	96.094	ENSXMAG00000001133	snrpd3l	100	96.094	Xiphophorus_maculatus