EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000008783 (Gene tree)
Gene ID: 108430726
Gene Symbol: tdrkh
Alias: TDRD2|zgc:113056
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 9287 bases
Position: chrKV575289.1:7001605-7010891
Accession: 108430726
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000002391	KH_1	PF00013.29	4.7e-17	1	1
ENSPNAP00000002380	KH_1	PF00013.29	7.9e-17	1	1
ENSPNAP00000002391	TUDOR	PF00567.24	1.2e-24	1	1
ENSPNAP00000002380	TUDOR	PF00567.24	2.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000010522	-	3155	XM_017703380	ENSPNAP00000002380	896 (aa)	XP_017558869	-
ENSPNAT00000010533	-	2201	XM_017703398	ENSPNAP00000002391	578 (aa)	XP_017558887	UPI0008145579

Gene Model

Click here to download ENSPNAG00000008783's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000008783's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000008783	tdrkh	99	61.794	ENSAPOG00000012653	tdrkh	99	62.766	Acanthochromis_polyacanthus
ENSPNAG00000008783	tdrkh	91	58.989	ENSACIG00000010318	tdrkh	99	59.065	Amphilophus_citrinellus
ENSPNAG00000008783	tdrkh	97	61.634	ENSAOCG00000020623	tdrkh	99	62.456	Amphiprion_ocellaris
ENSPNAG00000008783	tdrkh	94	62.124	ENSAPEG00000018388	tdrkh	99	61.754	Amphiprion_percula
ENSPNAG00000008783	tdrkh	99	61.735	ENSATEG00000023809	tdrkh	99	62.410	Anabas_testudineus
ENSPNAG00000008783	tdrkh	94	59.928	ENSACLG00000003017	tdrkh	99	59.928	Astatotilapia_calliptera
ENSPNAG00000008783	tdrkh	99	85.789	ENSAMXG00000011664	tdrkh	99	85.789	Astyanax_mexicanus
ENSPNAG00000008783	tdrkh	95	56.514	ENSCSEG00000002894	tdrkh	99	56.514	Cynoglossus_semilaevis
ENSPNAG00000008783	tdrkh	58	71.707	ENSCVAG00000020347	tdrkh	77	71.707	Cyprinodon_variegatus
ENSPNAG00000008783	tdrkh	100	76.207	ENSDARG00000053474	tdrkh	100	76.303	Danio_rerio
ENSPNAG00000008783	tdrkh	99	65.886	ENSELUG00000024537	tdrkh	99	65.886	Esox_lucius
ENSPNAG00000008783	tdrkh	94	60.498	ENSFHEG00000003544	tdrkh	99	60.498	Fundulus_heteroclitus
ENSPNAG00000008783	tdrkh	99	59.966	ENSGMOG00000009304	tdrkh	99	59.966	Gadus_morhua
ENSPNAG00000008783	tdrkh	94	58.719	ENSGAFG00000010754	tdrkh	99	58.719	Gambusia_affinis
ENSPNAG00000008783	tdrkh	99	60.137	ENSGACG00000015258	tdrkh	99	60.137	Gasterosteus_aculeatus
ENSPNAG00000008783	tdrkh	94	59.928	ENSHBUG00000017609	tdrkh	99	59.928	Haplochromis_burtoni
ENSPNAG00000008783	tdrkh	94	82.878	ENSIPUG00000009673	tdrkh	100	82.878	Ictalurus_punctatus
ENSPNAG00000008783	tdrkh	94	60.108	ENSKMAG00000016638	tdrkh	93	60.254	Kryptolebias_marmoratus
ENSPNAG00000008783	tdrkh	96	58.596	ENSLBEG00000027323	tdrkh	99	58.596	Labrus_bergylta
ENSPNAG00000008783	tdrkh	99	54.040	ENSLOCG00000011381	tdrkh	99	55.477	Lepisosteus_oculatus
ENSPNAG00000008783	tdrkh	94	61.041	ENSMAMG00000020343	tdrkh	99	61.041	Mastacembelus_armatus
ENSPNAG00000008783	tdrkh	94	59.928	ENSMZEG00005006755	tdrkh	99	59.928	Maylandia_zebra
ENSPNAG00000008783	tdrkh	97	59.788	ENSMMOG00000020663	tdrkh	95	59.859	Mola_mola
ENSPNAG00000008783	tdrkh	94	58.761	ENSMALG00000015401	tdrkh	99	58.761	Monopterus_albus
ENSPNAG00000008783	tdrkh	94	57.685	ENSNBRG00000023815	tdrkh	99	57.685	Neolamprologus_brichardi
ENSPNAG00000008783	tdrkh	94	58.813	ENSORLG00000029204	tdrkh	99	58.813	Oryzias_latipes
ENSPNAG00000008783	tdrkh	88	57.524	ENSORLG00020016168	tdrkh	99	56.877	Oryzias_latipes_hni
ENSPNAG00000008783	tdrkh	94	55.835	ENSORLG00015014094	tdrkh	99	55.835	Oryzias_latipes_hsok
ENSPNAG00000008783	tdrkh	95	57.989	ENSOMEG00000015063	tdrkh	92	57.989	Oryzias_melastigma
ENSPNAG00000008783	tdrkh	98	61.750	ENSPKIG00000017597	tdrkh	99	64.452	Paramormyrops_kingsleyae
ENSPNAG00000008783	tdrkh	94	56.884	ENSPMGG00000019362	tdrkh	99	57.246	Periophthalmus_magnuspinnatus
ENSPNAG00000008783	tdrkh	99	56.951	ENSPFOG00000013032	tdrkh	99	56.951	Poecilia_formosa
ENSPNAG00000008783	tdrkh	94	57.522	ENSPLAG00000004193	tdrkh	99	57.522	Poecilia_latipinna
ENSPNAG00000008783	tdrkh	94	57.699	ENSPMEG00000016502	tdrkh	99	57.699	Poecilia_mexicana
ENSPNAG00000008783	tdrkh	99	56.345	ENSPREG00000004213	tdrkh	99	56.345	Poecilia_reticulata
ENSPNAG00000008783	tdrkh	91	59.590	ENSPNYG00000022818	tdrkh	97	59.665	Pundamilia_nyererei
ENSPNAG00000008783	tdrkh	94	60.436	ENSSFOG00015001048	tdrkh	99	60.617	Scleropages_formosus
ENSPNAG00000008783	tdrkh	97	60.536	ENSSMAG00000001532	tdrkh	99	61.538	Scophthalmus_maximus
ENSPNAG00000008783	tdrkh	94	61.170	ENSSDUG00000013393	tdrkh	99	60.847	Seriola_dumerili
ENSPNAG00000008783	tdrkh	99	61.436	ENSSLDG00000017418	tdrkh	99	61.552	Seriola_lalandi_dorsalis
ENSPNAG00000008783	tdrkh	99	61.398	ENSSPAG00000006435	tdrkh	99	61.564	Stegastes_partitus
ENSPNAG00000008783	tdrkh	91	56.238	ENSTRUG00000006644	tdrkh	97	56.401	Takifugu_rubripes
ENSPNAG00000008783	tdrkh	94	57.345	ENSTNIG00000003157	tdrkh	100	57.345	Tetraodon_nigroviridis
ENSPNAG00000008783	tdrkh	75	75.630	ENSXCOG00000016972	tdrkh	99	75.630	Xiphophorus_couchianus
ENSPNAG00000008783	tdrkh	94	57.500	ENSXMAG00000014756	tdrkh	99	57.500	Xiphophorus_maculatus