EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000008794 (Gene tree)
Gene ID: 108435418
Gene Symbol: mtrex
Alias: julie|mtrex|skiv2l2|wu:fd11a05|zgc:63838
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 53699 bases
Position: chrKV575467.1:946362-1000060
Accession: 108435418
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000002369	rRNA_proc-arch	PF13234.6	3.1e-85	1	1
ENSPNAP00000024234	rRNA_proc-arch	PF13234.6	3.5e-85	1	1
ENSPNAP00000024234	DEAD	PF00270.29	3.5e-17	1	1
ENSPNAP00000002369	DEAD	PF00270.29	3.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000010557	-	6442	XM_017711252	ENSPNAP00000002369	1037 (aa)	XP_017566741	UPI0008149C73
ENSPNAT00000010641	-	3000	-	ENSPNAP00000024234	999 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000008794's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000008794's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000008794	mtrex	93	36.438	ENSPNAG00000011823	skiv2l	76	36.745

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000008794	mtrex	100	85.864	ENSG00000039123	MTREX	100	85.864	Homo_sapiens
ENSPNAG00000008794	mtrex	100	87.777	ENSAPOG00000007814	mtrex	100	87.488	Acanthochromis_polyacanthus
ENSPNAG00000008794	mtrex	100	86.164	ENSAMEG00000013856	MTREX	100	85.973	Ailuropoda_melanoleuca
ENSPNAG00000008794	mtrex	100	85.347	ENSACIG00000015117	mtrex	100	85.572	Amphilophus_citrinellus
ENSPNAG00000008794	mtrex	100	87.873	ENSAOCG00000011884	mtrex	100	87.584	Amphiprion_ocellaris
ENSPNAG00000008794	mtrex	100	87.873	ENSAPEG00000019384	mtrex	100	87.584	Amphiprion_percula
ENSPNAG00000008794	mtrex	100	87.572	ENSATEG00000015117	mtrex	100	87.380	Anabas_testudineus
ENSPNAG00000008794	mtrex	96	87.500	ENSAPLG00000009694	MTREX	99	87.500	Anas_platyrhynchos
ENSPNAG00000008794	mtrex	100	86.303	ENSACAG00000015200	MTREX	96	85.920	Anolis_carolinensis
ENSPNAG00000008794	mtrex	100	86.055	ENSANAG00000023095	MTREX	98	88.778	Aotus_nancymaae
ENSPNAG00000008794	mtrex	100	87.680	ENSACLG00000001921	mtrex	100	87.584	Astatotilapia_calliptera
ENSPNAG00000008794	mtrex	95	94.422	ENSAMXG00000018751	mtrex	99	94.422	Astyanax_mexicanus
ENSPNAG00000008794	mtrex	100	86.124	ENSBTAG00000010518	MTREX	100	86.029	Bos_taurus
ENSPNAG00000008794	mtrex	93	53.560	WBGene00012342	mtr-4	94	53.183	Caenorhabditis_elegans
ENSPNAG00000008794	mtrex	100	85.565	ENSCJAG00000001773	MTREX	100	85.565	Callithrix_jacchus
ENSPNAG00000008794	mtrex	100	86.151	ENSCAFG00000006818	MTREX	100	86.151	Canis_familiaris
ENSPNAG00000008794	mtrex	100	86.151	ENSCAFG00020024352	MTREX	100	86.151	Canis_lupus_dingo
ENSPNAG00000008794	mtrex	100	86.055	ENSCHIG00000024413	MTREX	100	85.960	Capra_hircus
ENSPNAG00000008794	mtrex	94	87.433	ENSTSYG00000007389	MTREX	100	87.433	Carlito_syrichta
ENSPNAG00000008794	mtrex	96	66.134	ENSCAPG00000008696	MTREX	99	66.134	Cavia_aperea
ENSPNAG00000008794	mtrex	100	85.891	ENSCPOG00000009797	MTREX	100	86.055	Cavia_porcellus
ENSPNAG00000008794	mtrex	100	86.055	ENSCCAG00000014177	MTREX	100	86.055	Cebus_capucinus
ENSPNAG00000008794	mtrex	100	86.055	ENSCATG00000042153	MTREX	100	86.055	Cercocebus_atys
ENSPNAG00000008794	mtrex	100	85.960	ENSCLAG00000006622	MTREX	100	85.960	Chinchilla_lanigera
ENSPNAG00000008794	mtrex	100	82.190	ENSCSAG00000016445	MTREX	100	82.190	Chlorocebus_sabaeus
ENSPNAG00000008794	mtrex	69	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSPNAG00000008794	mtrex	100	86.538	ENSCPBG00000026551	MTREX	94	86.538	Chrysemys_picta_bellii
ENSPNAG00000008794	mtrex	99	66.506	ENSCING00000003239	-	99	66.410	Ciona_intestinalis
ENSPNAG00000008794	mtrex	99	65.255	ENSCSAVG00000009304	-	100	69.742	Ciona_savignyi
ENSPNAG00000008794	mtrex	100	85.960	ENSCANG00000035770	MTREX	100	85.864	Colobus_angolensis_palliatus
ENSPNAG00000008794	mtrex	100	86.233	ENSCGRG00001024680	Mtrex	100	86.233	Cricetulus_griseus_chok1gshd
ENSPNAG00000008794	mtrex	100	86.233	ENSCGRG00000000307	Mtrex	100	86.233	Cricetulus_griseus_crigri
ENSPNAG00000008794	mtrex	100	86.596	ENSCSEG00000018621	mtrex	98	86.596	Cynoglossus_semilaevis
ENSPNAG00000008794	mtrex	100	87.103	ENSCVAG00000004556	mtrex	100	87.392	Cyprinodon_variegatus
ENSPNAG00000008794	mtrex	100	91.803	ENSDARG00000013457	mtrex	100	91.803	Danio_rerio
ENSPNAG00000008794	mtrex	100	85.538	ENSDNOG00000015375	MTREX	100	85.538	Dasypus_novemcinctus
ENSPNAG00000008794	mtrex	100	85.891	ENSDORG00000006782	Mtrex	100	85.987	Dipodomys_ordii
ENSPNAG00000008794	mtrex	98	63.417	FBgn0001986	Mtr4	99	62.323	Drosophila_melanogaster
ENSPNAG00000008794	mtrex	76	98.039	ENSETEG00000000727	MTREX	73	98.039	Echinops_telfairi
ENSPNAG00000008794	mtrex	99	74.783	ENSEBUG00000012869	mtrex	99	74.783	Eptatretus_burgeri
ENSPNAG00000008794	mtrex	100	85.864	ENSEASG00005013270	MTREX	100	85.864	Equus_asinus_asinus
ENSPNAG00000008794	mtrex	100	85.960	ENSECAG00000023723	MTREX	100	92.558	Equus_caballus
ENSPNAG00000008794	mtrex	98	77.983	ENSEEUG00000000527	MTREX	99	77.961	Erinaceus_europaeus
ENSPNAG00000008794	mtrex	98	90.597	ENSELUG00000004898	mtrex	100	93.277	Esox_lucius
ENSPNAG00000008794	mtrex	100	86.151	ENSFCAG00000010575	MTREX	100	85.960	Felis_catus
ENSPNAG00000008794	mtrex	100	85.577	ENSFALG00000010850	MTREX	100	85.577	Ficedula_albicollis
ENSPNAG00000008794	mtrex	100	85.878	ENSFDAG00000011199	MTREX	100	85.742	Fukomys_damarensis
ENSPNAG00000008794	mtrex	100	87.199	ENSFHEG00000023014	mtrex	100	85.000	Fundulus_heteroclitus
ENSPNAG00000008794	mtrex	100	83.638	ENSGMOG00000014702	mtrex	100	83.270	Gadus_morhua
ENSPNAG00000008794	mtrex	100	86.210	ENSGALG00000014709	MTREX	86	86.210	Gallus_gallus
ENSPNAG00000008794	mtrex	100	87.187	ENSGAFG00000012425	mtrex	100	87.572	Gambusia_affinis
ENSPNAG00000008794	mtrex	100	81.792	ENSGACG00000016260	mtrex	96	86.848	Gasterosteus_aculeatus
ENSPNAG00000008794	mtrex	100	86.058	ENSGAGG00000020036	MTREX	100	85.687	Gopherus_agassizii
ENSPNAG00000008794	mtrex	100	85.960	ENSGGOG00000001867	MTREX	100	85.960	Gorilla_gorilla
ENSPNAG00000008794	mtrex	100	87.680	ENSHBUG00000006229	mtrex	100	87.584	Haplochromis_burtoni
ENSPNAG00000008794	mtrex	100	85.933	ENSHGLG00000019445	SKIV2L2	100	85.837	Heterocephalus_glaber_female
ENSPNAG00000008794	mtrex	100	85.933	ENSHGLG00100011833	SKIV2L2	100	85.837	Heterocephalus_glaber_male
ENSPNAG00000008794	mtrex	95	85.031	ENSHCOG00000019995	mtrex	100	86.762	Hippocampus_comes
ENSPNAG00000008794	mtrex	100	92.575	ENSIPUG00000024348	skiv2l2	100	92.575	Ictalurus_punctatus
ENSPNAG00000008794	mtrex	100	85.782	ENSSTOG00000010802	MTREX	100	85.782	Ictidomys_tridecemlineatus
ENSPNAG00000008794	mtrex	100	81.592	ENSJJAG00000020975	Mtrex	100	81.496	Jaculus_jaculus
ENSPNAG00000008794	mtrex	100	86.333	ENSKMAG00000012642	mtrex	100	86.429	Kryptolebias_marmoratus
ENSPNAG00000008794	mtrex	100	86.718	ENSLBEG00000019367	mtrex	99	88.008	Labrus_bergylta
ENSPNAG00000008794	mtrex	100	87.367	ENSLACG00000009075	MTREX	100	87.367	Latimeria_chalumnae
ENSPNAG00000008794	mtrex	100	90.568	ENSLOCG00000010186	mtrex	100	90.568	Lepisosteus_oculatus
ENSPNAG00000008794	mtrex	99	83.954	ENSLAFG00000010497	MTREX	100	83.954	Loxodonta_africana
ENSPNAG00000008794	mtrex	100	86.055	ENSMFAG00000031610	MTREX	100	86.055	Macaca_fascicularis
ENSPNAG00000008794	mtrex	100	85.605	ENSMMUG00000010379	MTREX	100	85.605	Macaca_mulatta
ENSPNAG00000008794	mtrex	100	86.055	ENSMNEG00000032746	MTREX	100	86.055	Macaca_nemestrina
ENSPNAG00000008794	mtrex	100	86.055	ENSMLEG00000041051	MTREX	100	86.055	Mandrillus_leucophaeus
ENSPNAG00000008794	mtrex	100	86.481	ENSMAMG00000016753	mtrex	98	89.178	Mastacembelus_armatus
ENSPNAG00000008794	mtrex	100	87.680	ENSMZEG00005000414	mtrex	100	87.584	Maylandia_zebra
ENSPNAG00000008794	mtrex	95	64.286	ENSMGAG00000003980	MTREX	100	64.286	Meleagris_gallopavo
ENSPNAG00000008794	mtrex	100	85.755	ENSMAUG00000010727	Mtrex	100	85.946	Mesocricetus_auratus
ENSPNAG00000008794	mtrex	100	85.960	ENSMICG00000012779	MTREX	100	85.960	Microcebus_murinus
ENSPNAG00000008794	mtrex	100	85.960	ENSMOCG00000019886	Mtrex	100	85.864	Microtus_ochrogaster
ENSPNAG00000008794	mtrex	100	85.388	ENSMMOG00000002476	mtrex	100	85.388	Mola_mola
ENSPNAG00000008794	mtrex	100	86.127	ENSMODG00000019494	MTREX	100	86.127	Monodelphis_domestica
ENSPNAG00000008794	mtrex	100	80.547	ENSMALG00000002917	mtrex	98	85.113	Monopterus_albus
ENSPNAG00000008794	mtrex	100	85.455	MGP_CAROLIEiJ_G0018896	Mtrex	100	85.455	Mus_caroli
ENSPNAG00000008794	mtrex	100	85.646	ENSMUSG00000016018	Mtrex	100	85.646	Mus_musculus
ENSPNAG00000008794	mtrex	100	85.646	MGP_PahariEiJ_G0015967	Mtrex	100	85.646	Mus_pahari
ENSPNAG00000008794	mtrex	100	85.646	MGP_SPRETEiJ_G0019775	Mtrex	100	85.646	Mus_spretus
ENSPNAG00000008794	mtrex	100	86.055	ENSMPUG00000007619	MTREX	100	86.055	Mustela_putorius_furo
ENSPNAG00000008794	mtrex	100	85.878	ENSMLUG00000001152	MTREX	100	85.687	Myotis_lucifugus
ENSPNAG00000008794	mtrex	100	86.055	ENSNGAG00000011938	Mtrex	100	86.055	Nannospalax_galili
ENSPNAG00000008794	mtrex	100	87.873	ENSNBRG00000011293	mtrex	100	87.777	Neolamprologus_brichardi
ENSPNAG00000008794	mtrex	100	82.364	ENSNLEG00000001494	MTREX	100	82.269	Nomascus_leucogenys
ENSPNAG00000008794	mtrex	83	98.039	ENSMEUG00000006496	-	83	98.039	Notamacropus_eugenii
ENSPNAG00000008794	mtrex	100	73.084	ENSOPRG00000008009	MTREX	100	72.989	Ochotona_princeps
ENSPNAG00000008794	mtrex	100	85.291	ENSODEG00000017234	MTREX	100	85.196	Octodon_degus
ENSPNAG00000008794	mtrex	100	87.873	ENSONIG00000007587	mtrex	100	87.777	Oreochromis_niloticus
ENSPNAG00000008794	mtrex	52	85.078	ENSOANG00000004885	-	99	85.078	Ornithorhynchus_anatinus
ENSPNAG00000008794	mtrex	100	86.411	ENSOCUG00000004463	MTREX	100	86.316	Oryctolagus_cuniculus
ENSPNAG00000008794	mtrex	100	87.283	ENSORLG00000005443	mtrex	100	87.091	Oryzias_latipes
ENSPNAG00000008794	mtrex	100	87.187	ENSORLG00020006329	mtrex	100	86.994	Oryzias_latipes_hni
ENSPNAG00000008794	mtrex	100	87.187	ENSORLG00015012924	mtrex	100	86.994	Oryzias_latipes_hsok
ENSPNAG00000008794	mtrex	100	86.551	ENSOMEG00000008825	mtrex	100	86.359	Oryzias_melastigma
ENSPNAG00000008794	mtrex	100	86.246	ENSOGAG00000002886	MTREX	100	86.246	Otolemur_garnettii
ENSPNAG00000008794	mtrex	100	85.810	ENSOARG00000007764	MTREX	100	85.714	Ovis_aries
ENSPNAG00000008794	mtrex	100	86.151	ENSPPAG00000039291	MTREX	100	86.151	Pan_paniscus
ENSPNAG00000008794	mtrex	100	86.151	ENSPPRG00000019701	MTREX	100	85.960	Panthera_pardus
ENSPNAG00000008794	mtrex	100	84.718	ENSPTIG00000009313	MTREX	100	84.527	Panthera_tigris_altaica
ENSPNAG00000008794	mtrex	100	86.151	ENSPTRG00000016878	MTREX	100	86.151	Pan_troglodytes
ENSPNAG00000008794	mtrex	100	86.151	ENSPANG00000009697	MTREX	100	86.151	Papio_anubis
ENSPNAG00000008794	mtrex	100	90.164	ENSPKIG00000020833	mtrex	100	90.164	Paramormyrops_kingsleyae
ENSPNAG00000008794	mtrex	100	86.224	ENSPSIG00000012150	MTREX	100	85.946	Pelodiscus_sinensis
ENSPNAG00000008794	mtrex	100	85.516	ENSPMGG00000002582	mtrex	100	85.303	Periophthalmus_magnuspinnatus
ENSPNAG00000008794	mtrex	95	66.431	ENSPMAG00000009668	mtrex	100	66.431	Petromyzon_marinus
ENSPNAG00000008794	mtrex	95	88.550	ENSPCIG00000024730	MTREX	100	90.231	Phascolarctos_cinereus
ENSPNAG00000008794	mtrex	76	89.354	ENSPFOG00000003141	mtrex	100	89.480	Poecilia_formosa
ENSPNAG00000008794	mtrex	100	87.295	ENSPLAG00000021311	mtrex	100	87.199	Poecilia_latipinna
ENSPNAG00000008794	mtrex	96	86.993	ENSPMEG00000010597	mtrex	99	89.028	Poecilia_mexicana
ENSPNAG00000008794	mtrex	100	87.103	ENSPREG00000003089	mtrex	100	87.007	Poecilia_reticulata
ENSPNAG00000008794	mtrex	98	85.811	ENSPPYG00000015469	MTREX	98	85.811	Pongo_abelii
ENSPNAG00000008794	mtrex	89	96.296	ENSPCAG00000013120	MTREX	94	76.744	Procavia_capensis
ENSPNAG00000008794	mtrex	99	80.713	ENSPCOG00000018092	MTREX	91	89.925	Propithecus_coquereli
ENSPNAG00000008794	mtrex	100	85.960	ENSPVAG00000002445	MTREX	100	85.864	Pteropus_vampyrus
ENSPNAG00000008794	mtrex	100	87.584	ENSPNYG00000006164	mtrex	100	87.488	Pundamilia_nyererei
ENSPNAG00000008794	mtrex	98	85.326	ENSRNOG00000010125	Mtrex	96	85.326	Rattus_norvegicus
ENSPNAG00000008794	mtrex	100	84.241	ENSRBIG00000034930	MTREX	100	84.241	Rhinopithecus_bieti
ENSPNAG00000008794	mtrex	100	85.864	ENSRROG00000039895	MTREX	100	85.864	Rhinopithecus_roxellana
ENSPNAG00000008794	mtrex	99	52.000	YJL050W	MTR4	95	53.262	Saccharomyces_cerevisiae
ENSPNAG00000008794	mtrex	100	86.055	ENSSBOG00000026693	MTREX	100	86.055	Saimiri_boliviensis_boliviensis
ENSPNAG00000008794	mtrex	96	87.800	ENSSHAG00000004600	MTREX	99	87.800	Sarcophilus_harrisii
ENSPNAG00000008794	mtrex	100	89.875	ENSSFOG00015014355	skiv2l2	100	89.875	Scleropages_formosus
ENSPNAG00000008794	mtrex	100	87.392	ENSSMAG00000007572	mtrex	100	87.199	Scophthalmus_maximus
ENSPNAG00000008794	mtrex	100	87.873	ENSSDUG00000023789	mtrex	100	87.584	Seriola_dumerili
ENSPNAG00000008794	mtrex	100	87.777	ENSSLDG00000006301	mtrex	100	87.488	Seriola_lalandi_dorsalis
ENSPNAG00000008794	mtrex	100	84.145	ENSSARG00000008387	MTREX	100	83.822	Sorex_araneus
ENSPNAG00000008794	mtrex	89	87.562	ENSSPUG00000007071	MTREX	96	87.562	Sphenodon_punctatus
ENSPNAG00000008794	mtrex	100	84.712	ENSSPAG00000011319	mtrex	100	84.808	Stegastes_partitus
ENSPNAG00000008794	mtrex	100	86.437	ENSSSCG00000016911	MTREX	100	86.342	Sus_scrofa
ENSPNAG00000008794	mtrex	100	85.014	ENSTGUG00000002480	MTREX	100	84.918	Taeniopygia_guttata
ENSPNAG00000008794	mtrex	100	85.756	ENSTRUG00000014571	mtrex	100	85.756	Takifugu_rubripes
ENSPNAG00000008794	mtrex	100	70.965	ENSTBEG00000007769	MTREX	100	70.965	Tupaia_belangeri
ENSPNAG00000008794	mtrex	100	86.124	ENSTTRG00000008678	MTREX	100	86.029	Tursiops_truncatus
ENSPNAG00000008794	mtrex	100	86.151	ENSUAMG00000023061	MTREX	100	86.151	Ursus_americanus
ENSPNAG00000008794	mtrex	100	86.044	ENSUMAG00000009373	MTREX	99	91.086	Ursus_maritimus
ENSPNAG00000008794	mtrex	100	76.218	ENSVPAG00000011174	MTREX	100	76.122	Vicugna_pacos
ENSPNAG00000008794	mtrex	100	86.246	ENSVVUG00000021337	MTREX	100	86.246	Vulpes_vulpes
ENSPNAG00000008794	mtrex	100	86.910	ENSXETG00000032798	MTREX	100	86.910	Xenopus_tropicalis
ENSPNAG00000008794	mtrex	100	87.007	ENSXMAG00000004799	mtrex	100	87.199	Xiphophorus_maculatus