EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000008823 (Gene tree)
Gene ID: 108438733
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: la-related protein 1B-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 61782 bases
Position: chrKV575567.1:197948-259729
Accession: 108438733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000002410	La	PF05383.17	4.4e-20	1	1
ENSPNAP00000002393	La	PF05383.17	4.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000010478	-	3683	XM_017716734	ENSPNAP00000002410	1098 (aa)	XP_017572223	-
ENSPNAT00000010507	-	3069	-	ENSPNAP00000002393	1022 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000008823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000008823's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000008823	larp1b	91	49.656	ENSPNAG00000021427	larp1	94	51.775

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000008823	larp1b	85	55.603	ENSG00000138709	LARP1B	96	55.740	Homo_sapiens
ENSPNAG00000008823	larp1b	92	63.460	ENSAPOG00000020101	larp1b	99	60.491	Acanthochromis_polyacanthus
ENSPNAG00000008823	larp1b	51	50.088	ENSAMEG00000002748	LARP1B	98	48.136	Ailuropoda_melanoleuca
ENSPNAG00000008823	larp1b	90	64.094	ENSACIG00000023890	larp1b	94	60.159	Amphilophus_citrinellus
ENSPNAG00000008823	larp1b	84	63.146	ENSAOCG00000014268	larp1b	98	62.135	Amphiprion_ocellaris
ENSPNAG00000008823	larp1b	92	63.906	ENSAPEG00000004126	larp1b	99	61.437	Amphiprion_percula
ENSPNAG00000008823	larp1b	91	68.622	ENSATEG00000017849	larp1b	94	61.312	Anabas_testudineus
ENSPNAG00000008823	larp1b	71	59.688	ENSAPLG00000010129	LARP1B	82	57.997	Anas_platyrhynchos
ENSPNAG00000008823	larp1b	78	58.960	ENSACAG00000011338	LARP1B	93	54.822	Anolis_carolinensis
ENSPNAG00000008823	larp1b	63	54.532	ENSANAG00000034618	LARP1B	76	56.288	Aotus_nancymaae
ENSPNAG00000008823	larp1b	89	58.571	ENSACLG00000011948	larp1b	86	65.025	Astatotilapia_calliptera
ENSPNAG00000008823	larp1b	100	74.368	ENSAMXG00000006805	larp1b	100	77.364	Astyanax_mexicanus
ENSPNAG00000008823	larp1b	83	57.519	ENSBTAG00000012135	LARP1B	95	50.000	Bos_taurus
ENSPNAG00000008823	larp1b	84	55.724	ENSCJAG00000003338	LARP1B	99	54.719	Callithrix_jacchus
ENSPNAG00000008823	larp1b	81	61.105	ENSCAFG00000003831	LARP1B	99	57.469	Canis_familiaris
ENSPNAG00000008823	larp1b	83	55.520	ENSCAFG00020018899	LARP1B	97	53.041	Canis_lupus_dingo
ENSPNAG00000008823	larp1b	86	55.765	ENSCHIG00000023144	LARP1B	97	54.639	Capra_hircus
ENSPNAG00000008823	larp1b	84	55.591	ENSCCAG00000021948	LARP1B	95	54.536	Cebus_capucinus
ENSPNAG00000008823	larp1b	84	54.429	ENSCATG00000013541	LARP1B	95	52.859	Cercocebus_atys
ENSPNAG00000008823	larp1b	84	55.213	ENSCSAG00000003582	LARP1B	96	55.066	Chlorocebus_sabaeus
ENSPNAG00000008823	larp1b	84	53.115	ENSCHOG00000005354	LARP1B	80	59.186	Choloepus_hoffmanni
ENSPNAG00000008823	larp1b	82	57.111	ENSCPBG00000017480	LARP1B	70	62.202	Chrysemys_picta_bellii
ENSPNAG00000008823	larp1b	84	56.324	ENSCANG00000026958	LARP1B	95	56.264	Colobus_angolensis_palliatus
ENSPNAG00000008823	larp1b	86	63.341	ENSCSEG00000013519	larp1b	86	69.284	Cynoglossus_semilaevis
ENSPNAG00000008823	larp1b	87	63.397	ENSCVAG00000005046	larp1b	94	61.052	Cyprinodon_variegatus
ENSPNAG00000008823	larp1b	97	72.860	ENSDARG00000061169	larp1b	95	73.152	Danio_rerio
ENSPNAG00000008823	larp1b	65	55.587	ENSETEG00000012497	LARP1B	71	56.083	Echinops_telfairi
ENSPNAG00000008823	larp1b	83	44.914	ENSEBUG00000003668	larp1b	71	52.174	Eptatretus_burgeri
ENSPNAG00000008823	larp1b	83	56.439	ENSEASG00005018106	LARP1B	97	53.898	Equus_asinus_asinus
ENSPNAG00000008823	larp1b	83	57.361	ENSECAG00000001088	LARP1B	86	53.059	Equus_caballus
ENSPNAG00000008823	larp1b	65	62.190	ENSELUG00000023774	larp1b	90	57.525	Esox_lucius
ENSPNAG00000008823	larp1b	86	52.142	ENSFALG00000008098	LARP1B	81	58.648	Ficedula_albicollis
ENSPNAG00000008823	larp1b	94	62.093	ENSFHEG00000010264	larp1b	93	60.345	Fundulus_heteroclitus
ENSPNAG00000008823	larp1b	80	69.256	ENSGMOG00000005207	larp1b	77	60.087	Gadus_morhua
ENSPNAG00000008823	larp1b	86	52.371	ENSGALG00000010207	LARP1B	96	49.802	Gallus_gallus
ENSPNAG00000008823	larp1b	81	68.758	ENSGAFG00000012012	larp1b	94	64.855	Gambusia_affinis
ENSPNAG00000008823	larp1b	92	54.002	ENSGACG00000004609	larp1b	89	57.816	Gasterosteus_aculeatus
ENSPNAG00000008823	larp1b	82	58.104	ENSGAGG00000017209	LARP1B	88	54.696	Gopherus_agassizii
ENSPNAG00000008823	larp1b	84	55.330	ENSGGOG00000015900	LARP1B	96	55.519	Gorilla_gorilla
ENSPNAG00000008823	larp1b	90	61.630	ENSHBUG00000009730	larp1b	94	61.034	Haplochromis_burtoni
ENSPNAG00000008823	larp1b	68	66.620	ENSHCOG00000000918	larp1b	99	65.969	Hippocampus_comes
ENSPNAG00000008823	larp1b	97	75.791	ENSIPUG00000012138	larp1b	94	75.419	Ictalurus_punctatus
ENSPNAG00000008823	larp1b	88	61.638	ENSKMAG00000011589	larp1b	88	64.403	Kryptolebias_marmoratus
ENSPNAG00000008823	larp1b	91	70.822	ENSLBEG00000005655	larp1b	98	59.121	Labrus_bergylta
ENSPNAG00000008823	larp1b	90	57.805	ENSLACG00000015247	LARP1B	88	57.814	Latimeria_chalumnae
ENSPNAG00000008823	larp1b	75	65.757	ENSLOCG00000010684	larp1b	85	64.552	Lepisosteus_oculatus
ENSPNAG00000008823	larp1b	84	55.496	ENSMFAG00000002218	LARP1B	96	53.830	Macaca_fascicularis
ENSPNAG00000008823	larp1b	84	55.176	ENSMMUG00000021347	LARP1B	96	55.138	Macaca_mulatta
ENSPNAG00000008823	larp1b	84	53.400	ENSMNEG00000030406	LARP1B	78	62.780	Macaca_nemestrina
ENSPNAG00000008823	larp1b	84	56.043	ENSMLEG00000009306	LARP1B	95	56.081	Mandrillus_leucophaeus
ENSPNAG00000008823	larp1b	93	69.845	ENSMAMG00000000081	larp1b	93	66.383	Mastacembelus_armatus
ENSPNAG00000008823	larp1b	71	69.346	ENSMZEG00005002545	larp1b	99	65.875	Maylandia_zebra
ENSPNAG00000008823	larp1b	70	57.390	ENSMGAG00000004809	LARP1B	74	58.884	Meleagris_gallopavo
ENSPNAG00000008823	larp1b	84	57.481	ENSMICG00000036111	LARP1B	95	55.738	Microcebus_murinus
ENSPNAG00000008823	larp1b	84	56.080	ENSMODG00000012300	LARP1B	86	52.067	Monodelphis_domestica
ENSPNAG00000008823	larp1b	89	64.499	ENSMALG00000003638	larp1b	92	63.251	Monopterus_albus
ENSPNAG00000008823	larp1b	82	57.599	ENSMPUG00000017365	LARP1B	83	53.538	Mustela_putorius_furo
ENSPNAG00000008823	larp1b	81	55.879	ENSMLUG00000010229	LARP1B	80	61.265	Myotis_lucifugus
ENSPNAG00000008823	larp1b	90	53.962	ENSNBRG00000023846	larp1b	93	60.366	Neolamprologus_brichardi
ENSPNAG00000008823	larp1b	85	54.286	ENSNLEG00000013819	LARP1B	96	54.906	Nomascus_leucogenys
ENSPNAG00000008823	larp1b	66	59.072	ENSMEUG00000010308	LARP1B	77	57.384	Notamacropus_eugenii
ENSPNAG00000008823	larp1b	73	55.626	ENSOPRG00000005478	LARP1B	73	66.327	Ochotona_princeps
ENSPNAG00000008823	larp1b	85	57.787	ENSONIG00000012386	larp1b	92	67.102	Oreochromis_niloticus
ENSPNAG00000008823	larp1b	85	54.565	ENSOCUG00000013330	LARP1B	80	61.303	Oryctolagus_cuniculus
ENSPNAG00000008823	larp1b	89	62.196	ENSORLG00000017954	larp1b	93	60.300	Oryzias_latipes
ENSPNAG00000008823	larp1b	90	58.556	ENSORLG00020013081	larp1b	93	57.102	Oryzias_latipes_hni
ENSPNAG00000008823	larp1b	91	61.983	ENSORLG00015009580	larp1b	93	59.394	Oryzias_latipes_hsok
ENSPNAG00000008823	larp1b	89	63.868	ENSOMEG00000004210	larp1b	91	61.601	Oryzias_melastigma
ENSPNAG00000008823	larp1b	81	58.007	ENSOGAG00000005771	LARP1B	99	56.264	Otolemur_garnettii
ENSPNAG00000008823	larp1b	83	55.508	ENSOARG00000015300	LARP1B	96	55.592	Ovis_aries
ENSPNAG00000008823	larp1b	84	55.437	ENSPPAG00000030439	LARP1B	96	55.740	Pan_paniscus
ENSPNAG00000008823	larp1b	84	55.437	ENSPTRG00000016437	LARP1B	96	55.740	Pan_troglodytes
ENSPNAG00000008823	larp1b	84	55.496	ENSPANG00000012488	LARP1B	96	53.937	Papio_anubis
ENSPNAG00000008823	larp1b	88	52.513	ENSPKIG00000014360	larp1b	96	52.604	Paramormyrops_kingsleyae
ENSPNAG00000008823	larp1b	81	58.399	ENSPSIG00000012885	LARP1B	99	54.583	Pelodiscus_sinensis
ENSPNAG00000008823	larp1b	76	65.370	ENSPMGG00000007207	larp1b	87	68.548	Periophthalmus_magnuspinnatus
ENSPNAG00000008823	larp1b	64	57.345	ENSPMAG00000002700	larp1b	95	49.026	Petromyzon_marinus
ENSPNAG00000008823	larp1b	77	65.769	ENSPCIG00000026516	LARP1B	92	63.165	Phascolarctos_cinereus
ENSPNAG00000008823	larp1b	95	57.272	ENSPFOG00000019519	larp1b	93	65.139	Poecilia_formosa
ENSPNAG00000008823	larp1b	58	49.347	ENSPFOG00000022837	-	85	63.568	Poecilia_formosa
ENSPNAG00000008823	larp1b	97	58.005	ENSPLAG00000007115	larp1b	86	70.147	Poecilia_latipinna
ENSPNAG00000008823	larp1b	95	61.501	ENSPMEG00000001224	larp1b	99	59.390	Poecilia_mexicana
ENSPNAG00000008823	larp1b	84	54.925	ENSPCAG00000007546	LARP1B	95	55.000	Procavia_capensis
ENSPNAG00000008823	larp1b	82	61.644	ENSPCOG00000021874	LARP1B	95	73.333	Propithecus_coquereli
ENSPNAG00000008823	larp1b	85	52.244	ENSPVAG00000005373	LARP1B	99	50.212	Pteropus_vampyrus
ENSPNAG00000008823	larp1b	71	68.952	ENSPNYG00000017357	larp1b	99	64.895	Pundamilia_nyererei
ENSPNAG00000008823	larp1b	84	55.283	ENSRROG00000030771	LARP1B	96	55.359	Rhinopithecus_roxellana
ENSPNAG00000008823	larp1b	60	50.364	ENSSHAG00000014474	LARP1B	99	49.351	Sarcophilus_harrisii
ENSPNAG00000008823	larp1b	80	69.689	ENSSMAG00000006347	larp1b	96	61.920	Scophthalmus_maximus
ENSPNAG00000008823	larp1b	87	66.885	ENSSDUG00000004182	larp1b	93	61.599	Seriola_dumerili
ENSPNAG00000008823	larp1b	80	73.674	ENSSLDG00000014613	larp1b	92	68.284	Seriola_lalandi_dorsalis
ENSPNAG00000008823	larp1b	80	55.649	ENSSPUG00000011837	LARP1B	74	67.188	Sphenodon_punctatus
ENSPNAG00000008823	larp1b	92	61.150	ENSSPAG00000017772	larp1b	99	59.044	Stegastes_partitus
ENSPNAG00000008823	larp1b	86	56.455	ENSSSCG00000034280	LARP1B	99	84.615	Sus_scrofa
ENSPNAG00000008823	larp1b	72	61.905	ENSTGUG00000002098	-	95	58.549	Taeniopygia_guttata
ENSPNAG00000008823	larp1b	92	59.482	ENSTRUG00000005612	larp1b	93	60.622	Takifugu_rubripes
ENSPNAG00000008823	larp1b	85	67.969	ENSTNIG00000012398	larp1b	97	63.430	Tetraodon_nigroviridis
ENSPNAG00000008823	larp1b	63	52.677	ENSTBEG00000004177	LARP1B	72	52.632	Tupaia_belangeri
ENSPNAG00000008823	larp1b	74	57.940	ENSTTRG00000012984	LARP1B	81	57.895	Tursiops_truncatus
ENSPNAG00000008823	larp1b	85	55.814	ENSUMAG00000007373	LARP1B	85	58.909	Ursus_maritimus
ENSPNAG00000008823	larp1b	65	68.649	ENSVPAG00000007223	LARP1B	71	76.974	Vicugna_pacos
ENSPNAG00000008823	larp1b	83	56.217	ENSVVUG00000011307	LARP1B	84	61.620	Vulpes_vulpes
ENSPNAG00000008823	larp1b	87	51.879	ENSXETG00000022512	larp1b	92	50.782	Xenopus_tropicalis
ENSPNAG00000008823	larp1b	63	69.172	ENSXCOG00000004435	larp1b	73	63.150	Xiphophorus_couchianus
ENSPNAG00000008823	larp1b	91	62.339	ENSXMAG00000008150	larp1b	92	65.617	Xiphophorus_maculatus