EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000008845 (Gene tree)
Gene ID: 108440967
Gene Symbol: sf3b6
Alias: sf3b14|zgc:86708
Full Name: splicing factor 3b subunit 6
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 7801 bases
Position: chrKV575666.1:272622-280422
Accession: 108440967
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000002460	RRM_1	PF00076.22	3.2e-16	1	1
ENSPNAP00000024325	RRM_1	PF00076.22	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000010403	-	2163	XM_017720189	ENSPNAP00000002460	125 (aa)	XP_017575678	UPI0000000963
ENSPNAT00000010396	-	330	-	ENSPNAP00000024325	109 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000008845's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000008845's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000008845	sf3b6	100	100.000	ENSG00000115128	SF3B6	100	100.000	Homo_sapiens
ENSPNAG00000008845	sf3b6	100	98.400	ENSAPOG00000023788	sf3b6	100	98.400	Acanthochromis_polyacanthus
ENSPNAG00000008845	sf3b6	100	100.000	ENSAMEG00000002786	SF3B6	100	100.000	Ailuropoda_melanoleuca
ENSPNAG00000008845	sf3b6	100	98.400	ENSACIG00000012608	sf3b6	100	98.400	Amphilophus_citrinellus
ENSPNAG00000008845	sf3b6	100	98.400	ENSAOCG00000013394	sf3b6	100	98.400	Amphiprion_ocellaris
ENSPNAG00000008845	sf3b6	100	98.400	ENSAPEG00000015311	sf3b6	100	98.400	Amphiprion_percula
ENSPNAG00000008845	sf3b6	100	98.400	ENSATEG00000016569	sf3b6	100	98.400	Anabas_testudineus
ENSPNAG00000008845	sf3b6	100	100.000	ENSACAG00000011677	SF3B6	100	100.000	Anolis_carolinensis
ENSPNAG00000008845	sf3b6	100	100.000	ENSANAG00000027284	SF3B6	95	100.000	Aotus_nancymaae
ENSPNAG00000008845	sf3b6	100	98.400	ENSACLG00000007793	sf3b6	100	98.400	Astatotilapia_calliptera
ENSPNAG00000008845	sf3b6	100	100.000	ENSAMXG00000034888	sf3b6	100	100.000	Astyanax_mexicanus
ENSPNAG00000008845	sf3b6	100	98.400	ENSBTAG00000049128	-	100	98.400	Bos_taurus
ENSPNAG00000008845	sf3b6	100	100.000	ENSBTAG00000003407	SF3B6	100	100.000	Bos_taurus
ENSPNAG00000008845	sf3b6	100	68.000	WBGene00016808	C50D2.5	91	68.000	Caenorhabditis_elegans
ENSPNAG00000008845	sf3b6	100	100.000	ENSCJAG00000007716	SF3B6	100	100.000	Callithrix_jacchus
ENSPNAG00000008845	sf3b6	100	100.000	ENSCAFG00000003957	SF3B6	100	100.000	Canis_familiaris
ENSPNAG00000008845	sf3b6	100	100.000	ENSCAFG00020025576	SF3B6	100	100.000	Canis_lupus_dingo
ENSPNAG00000008845	sf3b6	100	100.000	ENSCHIG00000009902	SF3B6	100	100.000	Capra_hircus
ENSPNAG00000008845	sf3b6	100	100.000	ENSTSYG00000013978	SF3B6	100	100.000	Carlito_syrichta
ENSPNAG00000008845	sf3b6	97	96.694	ENSCAPG00000016302	SF3B6	99	96.694	Cavia_aperea
ENSPNAG00000008845	sf3b6	100	100.000	ENSCPOG00000008016	SF3B6	100	100.000	Cavia_porcellus
ENSPNAG00000008845	sf3b6	100	100.000	ENSCCAG00000036653	SF3B6	100	100.000	Cebus_capucinus
ENSPNAG00000008845	sf3b6	99	94.355	ENSCCAG00000018894	-	96	94.355	Cebus_capucinus
ENSPNAG00000008845	sf3b6	100	100.000	ENSCATG00000030936	SF3B6	100	100.000	Cercocebus_atys
ENSPNAG00000008845	sf3b6	100	100.000	ENSCLAG00000014512	SF3B6	100	100.000	Chinchilla_lanigera
ENSPNAG00000008845	sf3b6	100	100.000	ENSCSAG00000008390	SF3B6	100	100.000	Chlorocebus_sabaeus
ENSPNAG00000008845	sf3b6	100	100.000	ENSCHOG00000000689	SF3B6	100	100.000	Choloepus_hoffmanni
ENSPNAG00000008845	sf3b6	92	82.000	ENSCHOG00000013886	-	99	74.194	Choloepus_hoffmanni
ENSPNAG00000008845	sf3b6	100	100.000	ENSCPBG00000020042	SF3B6	100	100.000	Chrysemys_picta_bellii
ENSPNAG00000008845	sf3b6	98	81.308	ENSCING00000012689	-	97	80.488	Ciona_intestinalis
ENSPNAG00000008845	sf3b6	100	100.000	ENSCANG00000030559	SF3B6	100	100.000	Colobus_angolensis_palliatus
ENSPNAG00000008845	sf3b6	100	100.000	ENSCGRG00001014595	Sf3b6	100	100.000	Cricetulus_griseus_chok1gshd
ENSPNAG00000008845	sf3b6	100	100.000	ENSCGRG00000005272	Sf3b6	100	100.000	Cricetulus_griseus_crigri
ENSPNAG00000008845	sf3b6	100	97.600	ENSCSEG00000019017	sf3b6	100	97.600	Cynoglossus_semilaevis
ENSPNAG00000008845	sf3b6	100	99.200	ENSCVAG00000005055	sf3b6	100	99.200	Cyprinodon_variegatus
ENSPNAG00000008845	sf3b6	100	100.000	ENSDARG00000009753	sf3b6	100	100.000	Danio_rerio
ENSPNAG00000008845	sf3b6	100	100.000	ENSDNOG00000007148	SF3B6	100	100.000	Dasypus_novemcinctus
ENSPNAG00000008845	sf3b6	100	100.000	ENSDORG00000009772	Sf3b6	100	100.000	Dipodomys_ordii
ENSPNAG00000008845	sf3b6	99	82.540	ENSDORG00000027390	-	98	82.540	Dipodomys_ordii
ENSPNAG00000008845	sf3b6	99	82.540	ENSDORG00000029761	-	98	82.540	Dipodomys_ordii
ENSPNAG00000008845	sf3b6	83	86.667	FBgn0035692	Sf3b6	95	77.391	Drosophila_melanogaster
ENSPNAG00000008845	sf3b6	92	92.174	ENSEBUG00000004424	sf3b6	91	92.174	Eptatretus_burgeri
ENSPNAG00000008845	sf3b6	100	88.800	ENSEASG00005008061	-	100	88.800	Equus_asinus_asinus
ENSPNAG00000008845	sf3b6	100	100.000	ENSEASG00005009993	SF3B6	100	100.000	Equus_asinus_asinus
ENSPNAG00000008845	sf3b6	100	92.661	ENSECAG00000015618	SF3B6	100	92.661	Equus_caballus
ENSPNAG00000008845	sf3b6	88	89.583	ENSECAG00000027755	-	85	86.869	Equus_caballus
ENSPNAG00000008845	sf3b6	100	98.400	ENSELUG00000010379	sf3b6	100	98.400	Esox_lucius
ENSPNAG00000008845	sf3b6	100	100.000	ENSFCAG00000031365	SF3B6	100	100.000	Felis_catus
ENSPNAG00000008845	sf3b6	100	100.000	ENSFALG00000001651	SF3B6	100	100.000	Ficedula_albicollis
ENSPNAG00000008845	sf3b6	100	100.000	ENSFDAG00000007864	SF3B6	100	100.000	Fukomys_damarensis
ENSPNAG00000008845	sf3b6	100	99.200	ENSFHEG00000000685	sf3b6	100	99.200	Fundulus_heteroclitus
ENSPNAG00000008845	sf3b6	100	97.600	ENSGMOG00000005123	sf3b6	100	97.600	Gadus_morhua
ENSPNAG00000008845	sf3b6	73	100.000	ENSGALG00000016501	SF3B6	100	100.000	Gallus_gallus
ENSPNAG00000008845	sf3b6	100	98.400	ENSGAFG00000009334	sf3b6	100	98.400	Gambusia_affinis
ENSPNAG00000008845	sf3b6	100	97.600	ENSGACG00000004803	sf3b6	100	97.600	Gasterosteus_aculeatus
ENSPNAG00000008845	sf3b6	100	100.000	ENSGAGG00000012240	SF3B6	100	100.000	Gopherus_agassizii
ENSPNAG00000008845	sf3b6	100	100.000	ENSGGOG00000040806	SF3B6	100	100.000	Gorilla_gorilla
ENSPNAG00000008845	sf3b6	100	98.400	ENSHBUG00000012556	sf3b6	100	98.400	Haplochromis_burtoni
ENSPNAG00000008845	sf3b6	100	100.000	ENSHGLG00000014895	SF3B14	100	100.000	Heterocephalus_glaber_female
ENSPNAG00000008845	sf3b6	100	100.000	ENSHGLG00100008639	SF3B14	100	100.000	Heterocephalus_glaber_male
ENSPNAG00000008845	sf3b6	100	99.200	ENSHCOG00000019962	sf3b6	100	99.200	Hippocampus_comes
ENSPNAG00000008845	sf3b6	100	100.000	ENSIPUG00000023800	sf3b6	100	100.000	Ictalurus_punctatus
ENSPNAG00000008845	sf3b6	100	100.000	ENSJJAG00000021819	Sf3b6	100	100.000	Jaculus_jaculus
ENSPNAG00000008845	sf3b6	100	98.400	ENSKMAG00000004000	sf3b6	100	98.400	Kryptolebias_marmoratus
ENSPNAG00000008845	sf3b6	100	98.400	ENSLBEG00000022937	sf3b6	100	98.400	Labrus_bergylta
ENSPNAG00000008845	sf3b6	100	100.000	ENSLACG00000014326	SF3B6	100	100.000	Latimeria_chalumnae
ENSPNAG00000008845	sf3b6	100	100.000	ENSLOCG00000016481	sf3b6	100	100.000	Lepisosteus_oculatus
ENSPNAG00000008845	sf3b6	100	100.000	ENSLAFG00000029423	SF3B6	100	100.000	Loxodonta_africana
ENSPNAG00000008845	sf3b6	100	100.000	ENSMFAG00000038178	SF3B6	100	100.000	Macaca_fascicularis
ENSPNAG00000008845	sf3b6	100	100.000	ENSMMUG00000001282	SF3B6	100	100.000	Macaca_mulatta
ENSPNAG00000008845	sf3b6	100	100.000	ENSMNEG00000029050	SF3B6	100	100.000	Macaca_nemestrina
ENSPNAG00000008845	sf3b6	100	100.000	ENSMLEG00000019896	SF3B6	100	100.000	Mandrillus_leucophaeus
ENSPNAG00000008845	sf3b6	93	95.050	ENSMAMG00000007713	sf3b6	92	95.050	Mastacembelus_armatus
ENSPNAG00000008845	sf3b6	100	98.400	ENSMZEG00005003557	sf3b6	100	98.400	Maylandia_zebra
ENSPNAG00000008845	sf3b6	100	100.000	ENSMGAG00000014057	SF3B6	100	100.000	Meleagris_gallopavo
ENSPNAG00000008845	sf3b6	100	100.000	ENSMAUG00000000586	-	100	100.000	Mesocricetus_auratus
ENSPNAG00000008845	sf3b6	100	100.000	ENSMICG00000032874	SF3B6	100	100.000	Microcebus_murinus
ENSPNAG00000008845	sf3b6	100	100.000	ENSMOCG00000014338	Sf3b6	100	100.000	Microtus_ochrogaster
ENSPNAG00000008845	sf3b6	100	99.200	ENSMMOG00000015653	sf3b6	100	99.200	Mola_mola
ENSPNAG00000008845	sf3b6	100	92.800	ENSMODG00000002144	SF3B6	100	92.800	Monodelphis_domestica
ENSPNAG00000008845	sf3b6	100	99.200	ENSMALG00000019642	sf3b6	67	99.200	Monopterus_albus
ENSPNAG00000008845	sf3b6	100	100.000	MGP_CAROLIEiJ_G0017590	Sf3b6	100	100.000	Mus_caroli
ENSPNAG00000008845	sf3b6	100	100.000	ENSMUSG00000037361	Sf3b6	100	100.000	Mus_musculus
ENSPNAG00000008845	sf3b6	100	100.000	MGP_PahariEiJ_G0029348	Sf3b6	100	100.000	Mus_pahari
ENSPNAG00000008845	sf3b6	100	100.000	MGP_SPRETEiJ_G0018434	Sf3b6	100	100.000	Mus_spretus
ENSPNAG00000008845	sf3b6	100	100.000	ENSMPUG00000013957	SF3B6	100	100.000	Mustela_putorius_furo
ENSPNAG00000008845	sf3b6	100	98.400	ENSMLUG00000002473	SF3B6	100	98.400	Myotis_lucifugus
ENSPNAG00000008845	sf3b6	100	100.000	ENSNGAG00000020256	Sf3b6	100	100.000	Nannospalax_galili
ENSPNAG00000008845	sf3b6	100	98.400	ENSNBRG00000018244	sf3b6	100	98.400	Neolamprologus_brichardi
ENSPNAG00000008845	sf3b6	100	100.000	ENSNLEG00000000815	-	100	100.000	Nomascus_leucogenys
ENSPNAG00000008845	sf3b6	87	100.000	ENSODEG00000009547	SF3B6	92	100.000	Octodon_degus
ENSPNAG00000008845	sf3b6	100	98.400	ENSONIG00000001219	sf3b6	100	98.400	Oreochromis_niloticus
ENSPNAG00000008845	sf3b6	100	100.000	ENSOANG00000007627	SF3B6	100	100.000	Ornithorhynchus_anatinus
ENSPNAG00000008845	sf3b6	100	100.000	ENSOCUG00000022008	SF3B6	100	100.000	Oryctolagus_cuniculus
ENSPNAG00000008845	sf3b6	100	98.400	ENSORLG00000015955	sf3b6	100	98.400	Oryzias_latipes
ENSPNAG00000008845	sf3b6	100	98.400	ENSORLG00020005875	sf3b6	100	98.400	Oryzias_latipes_hni
ENSPNAG00000008845	sf3b6	100	98.400	ENSORLG00015001347	sf3b6	100	98.400	Oryzias_latipes_hsok
ENSPNAG00000008845	sf3b6	100	98.400	ENSOMEG00000014506	sf3b6	100	98.400	Oryzias_melastigma
ENSPNAG00000008845	sf3b6	100	100.000	ENSOGAG00000004468	SF3B6	100	100.000	Otolemur_garnettii
ENSPNAG00000008845	sf3b6	100	100.000	ENSOARG00000017819	SF3B6	100	100.000	Ovis_aries
ENSPNAG00000008845	sf3b6	100	100.000	ENSPPAG00000027816	SF3B6	100	100.000	Pan_paniscus
ENSPNAG00000008845	sf3b6	100	100.000	ENSPPRG00000023257	SF3B6	100	100.000	Panthera_pardus
ENSPNAG00000008845	sf3b6	100	100.000	ENSPTIG00000013322	SF3B6	100	100.000	Panthera_tigris_altaica
ENSPNAG00000008845	sf3b6	100	100.000	ENSPTRG00000011709	SF3B6	100	100.000	Pan_troglodytes
ENSPNAG00000008845	sf3b6	100	100.000	ENSPANG00000021963	SF3B6	100	100.000	Papio_anubis
ENSPNAG00000008845	sf3b6	100	100.000	ENSPKIG00000012311	sf3b6	100	100.000	Paramormyrops_kingsleyae
ENSPNAG00000008845	sf3b6	92	100.000	ENSPSIG00000017115	SF3B6	100	100.000	Pelodiscus_sinensis
ENSPNAG00000008845	sf3b6	93	95.050	ENSPMGG00000014621	sf3b6	84	95.050	Periophthalmus_magnuspinnatus
ENSPNAG00000008845	sf3b6	100	100.000	ENSPEMG00000010308	Sf3b6	100	100.000	Peromyscus_maniculatus_bairdii
ENSPNAG00000008845	sf3b6	94	88.136	ENSPMAG00000006008	sf3b6	94	88.136	Petromyzon_marinus
ENSPNAG00000008845	sf3b6	99	77.419	ENSPCIG00000015858	-	99	77.419	Phascolarctos_cinereus
ENSPNAG00000008845	sf3b6	100	100.000	ENSPCIG00000022128	-	100	100.000	Phascolarctos_cinereus
ENSPNAG00000008845	sf3b6	100	98.400	ENSPFOG00000012494	sf3b6	100	98.400	Poecilia_formosa
ENSPNAG00000008845	sf3b6	100	98.400	ENSPLAG00000020460	sf3b6	100	98.400	Poecilia_latipinna
ENSPNAG00000008845	sf3b6	100	98.400	ENSPMEG00000004426	sf3b6	100	98.400	Poecilia_mexicana
ENSPNAG00000008845	sf3b6	100	100.000	ENSPPYG00000012603	SF3B6	100	100.000	Pongo_abelii
ENSPNAG00000008845	sf3b6	100	100.000	ENSPVAG00000011346	SF3B6	100	100.000	Pteropus_vampyrus
ENSPNAG00000008845	sf3b6	100	98.400	ENSPNYG00000021832	sf3b6	100	98.400	Pundamilia_nyererei
ENSPNAG00000008845	sf3b6	100	84.800	ENSRNOG00000046172	Sf3b6	100	84.800	Rattus_norvegicus
ENSPNAG00000008845	sf3b6	100	100.000	ENSRBIG00000039598	SF3B6	100	100.000	Rhinopithecus_bieti
ENSPNAG00000008845	sf3b6	100	100.000	ENSRROG00000011368	SF3B6	100	100.000	Rhinopithecus_roxellana
ENSPNAG00000008845	sf3b6	100	100.000	ENSSBOG00000002914	SF3B6	100	100.000	Saimiri_boliviensis_boliviensis
ENSPNAG00000008845	sf3b6	100	100.000	ENSSFOG00015014370	sf3b6	100	100.000	Scleropages_formosus
ENSPNAG00000008845	sf3b6	100	98.400	ENSSMAG00000004566	sf3b6	100	98.400	Scophthalmus_maximus
ENSPNAG00000008845	sf3b6	100	98.400	ENSSDUG00000006538	sf3b6	100	98.400	Seriola_dumerili
ENSPNAG00000008845	sf3b6	100	98.400	ENSSLDG00000004494	sf3b6	100	98.400	Seriola_lalandi_dorsalis
ENSPNAG00000008845	sf3b6	100	100.000	ENSSARG00000011902	-	100	100.000	Sorex_araneus
ENSPNAG00000008845	sf3b6	100	100.000	ENSSPUG00000014919	SF3B6	100	100.000	Sphenodon_punctatus
ENSPNAG00000008845	sf3b6	100	98.400	ENSSPAG00000013201	sf3b6	100	98.400	Stegastes_partitus
ENSPNAG00000008845	sf3b6	100	100.000	ENSSSCG00000008587	SF3B6	100	100.000	Sus_scrofa
ENSPNAG00000008845	sf3b6	100	100.000	ENSTGUG00000013191	SF3B6	100	100.000	Taeniopygia_guttata
ENSPNAG00000008845	sf3b6	100	98.400	ENSTRUG00000025286	sf3b6	100	98.400	Takifugu_rubripes
ENSPNAG00000008845	sf3b6	100	98.400	ENSTNIG00000009719	sf3b6	100	98.400	Tetraodon_nigroviridis
ENSPNAG00000008845	sf3b6	92	100.000	ENSTBEG00000012532	SF3B6	100	100.000	Tupaia_belangeri
ENSPNAG00000008845	sf3b6	92	100.000	ENSTTRG00000013430	SF3B6	100	100.000	Tursiops_truncatus
ENSPNAG00000008845	sf3b6	100	100.000	ENSUAMG00000025329	SF3B6	100	100.000	Ursus_americanus
ENSPNAG00000008845	sf3b6	100	81.746	ENSUAMG00000000978	-	100	81.746	Ursus_americanus
ENSPNAG00000008845	sf3b6	100	100.000	ENSUMAG00000022835	SF3B6	100	100.000	Ursus_maritimus
ENSPNAG00000008845	sf3b6	92	100.000	ENSVPAG00000005546	SF3B6	100	100.000	Vicugna_pacos
ENSPNAG00000008845	sf3b6	100	100.000	ENSVVUG00000010874	SF3B6	100	100.000	Vulpes_vulpes
ENSPNAG00000008845	sf3b6	100	99.200	ENSXETG00000018204	sf3b6	100	99.200	Xenopus_tropicalis
ENSPNAG00000008845	sf3b6	91	96.970	ENSXCOG00000008477	sf3b6	77	96.970	Xiphophorus_couchianus
ENSPNAG00000008845	sf3b6	100	98.400	ENSXMAG00000010747	sf3b6	100	98.400	Xiphophorus_maculatus