EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000008931 (Gene tree)
Gene ID: -
Gene Symbol: exd1
Alias: zgc:154068
Full Name: exonuclease 3'-5' domain containing 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 2981 bases
Position: chrKV575293.1:1511380-1514360
Accession: 108436744
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000002570	DNA_pol_A_exo1	PF01612.20	6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000010217	-	2837	XM_017713422	ENSPNAP00000002570	482 (aa)	XP_017568911	-

Gene Model

Click here to download ENSPNAG00000008931's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000008931's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000008931	exd1	76	43.038	ENSG00000178997	EXD1	68	43.038	Homo_sapiens
ENSPNAG00000008931	exd1	82	56.608	ENSAPOG00000004287	-	91	56.269	Acanthochromis_polyacanthus
ENSPNAG00000008931	exd1	77	43.687	ENSAMEG00000016793	EXD1	69	43.687	Ailuropoda_melanoleuca
ENSPNAG00000008931	exd1	63	55.844	ENSACIG00000008996	-	65	55.844	Amphilophus_citrinellus
ENSPNAG00000008931	exd1	82	62.907	ENSAOCG00000009355	-	73	62.907	Amphiprion_ocellaris
ENSPNAG00000008931	exd1	68	65.549	ENSAPEG00000002194	-	89	65.549	Amphiprion_percula
ENSPNAG00000008931	exd1	50	74.793	ENSATEG00000002623	-	55	74.793	Anabas_testudineus
ENSPNAG00000008931	exd1	76	42.526	ENSACAG00000003676	EXD1	99	42.526	Anolis_carolinensis
ENSPNAG00000008931	exd1	76	44.020	ENSANAG00000029058	EXD1	68	44.020	Aotus_nancymaae
ENSPNAG00000008931	exd1	93	56.541	ENSACLG00000001361	-	81	56.763	Astatotilapia_calliptera
ENSPNAG00000008931	exd1	95	66.333	ENSAMXG00000026016	-	99	66.333	Astyanax_mexicanus
ENSPNAG00000008931	exd1	55	50.000	ENSBTAG00000008363	EXD1	56	50.000	Bos_taurus
ENSPNAG00000008931	exd1	76	42.667	ENSCJAG00000020765	EXD1	67	42.667	Callithrix_jacchus
ENSPNAG00000008931	exd1	76	43.077	ENSCAFG00000009510	EXD1	68	43.077	Canis_familiaris
ENSPNAG00000008931	exd1	51	48.780	ENSCAFG00020005504	EXD1	58	48.780	Canis_lupus_dingo
ENSPNAG00000008931	exd1	76	42.559	ENSCHIG00000019606	EXD1	69	42.559	Capra_hircus
ENSPNAG00000008931	exd1	77	45.573	ENSCPOG00000010573	EXD1	68	45.573	Cavia_porcellus
ENSPNAG00000008931	exd1	76	41.582	ENSCCAG00000016905	EXD1	68	41.582	Cebus_capucinus
ENSPNAG00000008931	exd1	76	43.038	ENSCATG00000037400	EXD1	68	43.038	Cercocebus_atys
ENSPNAG00000008931	exd1	55	38.095	ENSCSAG00000007647	EXD1	53	38.095	Chlorocebus_sabaeus
ENSPNAG00000008931	exd1	79	41.463	ENSCPBG00000013511	EXD1	65	41.032	Chrysemys_picta_bellii
ENSPNAG00000008931	exd1	83	41.707	ENSCANG00000036848	EXD1	72	41.707	Colobus_angolensis_palliatus
ENSPNAG00000008931	exd1	78	43.500	ENSCGRG00001011355	Exd1	67	43.500	Cricetulus_griseus_chok1gshd
ENSPNAG00000008931	exd1	78	43.500	ENSCGRG00000011633	Exd1	69	43.500	Cricetulus_griseus_crigri
ENSPNAG00000008931	exd1	78	59.788	ENSCSEG00000000904	-	70	59.788	Cynoglossus_semilaevis
ENSPNAG00000008931	exd1	65	46.349	ENSCVAG00000013735	-	85	58.482	Cyprinodon_variegatus
ENSPNAG00000008931	exd1	79	49.606	ENSDARG00000098669	exd1	99	53.651	Danio_rerio
ENSPNAG00000008931	exd1	76	42.748	ENSDNOG00000011410	EXD1	68	42.748	Dasypus_novemcinctus
ENSPNAG00000008931	exd1	55	51.852	ENSDORG00000012079	Exd1	56	51.852	Dipodomys_ordii
ENSPNAG00000008931	exd1	76	44.882	ENSEASG00005016394	EXD1	68	44.882	Equus_asinus_asinus
ENSPNAG00000008931	exd1	76	44.275	ENSECAG00000021250	EXD1	68	44.275	Equus_caballus
ENSPNAG00000008931	exd1	55	43.866	ENSEEUG00000001232	EXD1	53	43.866	Erinaceus_europaeus
ENSPNAG00000008931	exd1	95	61.089	ENSELUG00000006324	-	86	61.089	Esox_lucius
ENSPNAG00000008931	exd1	77	42.750	ENSFCAG00000028533	EXD1	70	42.750	Felis_catus
ENSPNAG00000008931	exd1	65	63.836	ENSGMOG00000015956	-	99	61.818	Gadus_morhua
ENSPNAG00000008931	exd1	79	40.441	ENSGALG00000041449	EXD1	99	40.441	Gallus_gallus
ENSPNAG00000008931	exd1	83	59.102	ENSGAFG00000017161	-	75	59.102	Gambusia_affinis
ENSPNAG00000008931	exd1	80	41.346	ENSGAGG00000019200	EXD1	67	41.346	Gopherus_agassizii
ENSPNAG00000008931	exd1	76	42.785	ENSGGOG00000004594	EXD1	68	43.291	Gorilla_gorilla
ENSPNAG00000008931	exd1	67	59.752	ENSHBUG00000017880	-	76	59.752	Haplochromis_burtoni
ENSPNAG00000008931	exd1	77	42.356	ENSHGLG00000015369	EXD1	69	42.356	Heterocephalus_glaber_female
ENSPNAG00000008931	exd1	77	42.462	ENSHGLG00100007398	EXD1	70	42.462	Heterocephalus_glaber_male
ENSPNAG00000008931	exd1	69	60.894	ENSIPUG00000003370	-	99	60.894	Ictalurus_punctatus
ENSPNAG00000008931	exd1	76	43.577	ENSSTOG00000014980	EXD1	68	43.577	Ictidomys_tridecemlineatus
ENSPNAG00000008931	exd1	95	56.263	ENSLBEG00000000022	-	84	56.263	Labrus_bergylta
ENSPNAG00000008931	exd1	56	68.727	ENSLBEG00000010957	-	87	68.727	Labrus_bergylta
ENSPNAG00000008931	exd1	75	47.570	ENSLACG00000006680	EXD1	65	47.570	Latimeria_chalumnae
ENSPNAG00000008931	exd1	79	57.474	ENSLOCG00000012278	-	98	57.474	Lepisosteus_oculatus
ENSPNAG00000008931	exd1	68	43.889	ENSLAFG00000014739	EXD1	67	43.889	Loxodonta_africana
ENSPNAG00000008931	exd1	76	43.291	ENSMFAG00000034670	EXD1	68	43.291	Macaca_fascicularis
ENSPNAG00000008931	exd1	83	41.822	ENSMMUG00000013991	EXD1	73	41.822	Macaca_mulatta
ENSPNAG00000008931	exd1	76	42.821	ENSMNEG00000037333	EXD1	68	42.821	Macaca_nemestrina
ENSPNAG00000008931	exd1	66	45.312	ENSMLEG00000033153	EXD1	95	45.312	Mandrillus_leucophaeus
ENSPNAG00000008931	exd1	53	64.093	ENSMAMG00000006592	exd1	63	64.093	Mastacembelus_armatus
ENSPNAG00000008931	exd1	93	56.984	ENSMZEG00005009193	-	85	57.206	Maylandia_zebra
ENSPNAG00000008931	exd1	75	39.031	ENSMGAG00000011179	EXD1	98	39.031	Meleagris_gallopavo
ENSPNAG00000008931	exd1	79	44.198	ENSMAUG00000002698	Exd1	70	44.198	Mesocricetus_auratus
ENSPNAG00000008931	exd1	76	43.766	ENSMICG00000014337	EXD1	68	43.766	Microcebus_murinus
ENSPNAG00000008931	exd1	76	44.638	ENSMOCG00000018151	Exd1	69	44.784	Microtus_ochrogaster
ENSPNAG00000008931	exd1	86	41.280	ENSMODG00000000164	EXD1	84	41.280	Monodelphis_domestica
ENSPNAG00000008931	exd1	77	56.267	ENSMALG00000015814	-	88	54.569	Monopterus_albus
ENSPNAG00000008931	exd1	80	43.826	MGP_CAROLIEiJ_G0024145	Exd1	70	43.826	Mus_caroli
ENSPNAG00000008931	exd1	84	42.593	ENSMUSG00000048647	Exd1	72	42.593	Mus_musculus
ENSPNAG00000008931	exd1	80	39.225	MGP_PahariEiJ_G0025588	Exd1	69	39.225	Mus_pahari
ENSPNAG00000008931	exd1	81	43.062	MGP_SPRETEiJ_G0025061	Exd1	71	43.062	Mus_spretus
ENSPNAG00000008931	exd1	83	41.412	ENSMPUG00000008811	EXD1	74	41.412	Mustela_putorius_furo
ENSPNAG00000008931	exd1	68	44.286	ENSMLUG00000001466	EXD1	67	44.286	Myotis_lucifugus
ENSPNAG00000008931	exd1	76	43.655	ENSNGAG00000002319	Exd1	68	43.655	Nannospalax_galili
ENSPNAG00000008931	exd1	55	71.698	ENSNBRG00000003229	-	71	71.698	Neolamprologus_brichardi
ENSPNAG00000008931	exd1	83	38.747	ENSNLEG00000003456	EXD1	73	38.747	Nomascus_leucogenys
ENSPNAG00000008931	exd1	54	49.049	ENSOPRG00000016433	EXD1	50	49.049	Ochotona_princeps
ENSPNAG00000008931	exd1	77	63.807	ENSONIG00000012043	-	98	64.075	Oreochromis_niloticus
ENSPNAG00000008931	exd1	65	43.275	ENSOCUG00000013817	EXD1	67	43.275	Oryctolagus_cuniculus
ENSPNAG00000008931	exd1	77	59.358	ENSORLG00000026344	-	75	59.358	Oryzias_latipes
ENSPNAG00000008931	exd1	77	59.467	ENSORLG00020005465	-	75	59.467	Oryzias_latipes_hni
ENSPNAG00000008931	exd1	77	59.249	ENSORLG00015004848	-	70	64.336	Oryzias_latipes_hsok
ENSPNAG00000008931	exd1	75	59.836	ENSOMEG00000019812	-	92	52.155	Oryzias_melastigma
ENSPNAG00000008931	exd1	55	43.866	ENSOGAG00000013095	EXD1	52	43.866	Otolemur_garnettii
ENSPNAG00000008931	exd1	76	41.855	ENSOARG00000020330	EXD1	68	41.855	Ovis_aries
ENSPNAG00000008931	exd1	76	42.785	ENSPPAG00000033760	EXD1	68	42.785	Pan_paniscus
ENSPNAG00000008931	exd1	77	42.750	ENSPPRG00000011128	EXD1	70	42.750	Panthera_pardus
ENSPNAG00000008931	exd1	77	42.750	ENSPTIG00000020026	EXD1	70	42.750	Panthera_tigris_altaica
ENSPNAG00000008931	exd1	76	42.785	ENSPTRG00000006941	EXD1	68	42.785	Pan_troglodytes
ENSPNAG00000008931	exd1	76	43.291	ENSPANG00000019000	EXD1	68	43.291	Papio_anubis
ENSPNAG00000008931	exd1	77	62.069	ENSPKIG00000000671	-	100	49.624	Paramormyrops_kingsleyae
ENSPNAG00000008931	exd1	80	41.076	ENSPSIG00000014473	EXD1	66	41.076	Pelodiscus_sinensis
ENSPNAG00000008931	exd1	97	49.153	ENSPMGG00000015466	-	92	49.153	Periophthalmus_magnuspinnatus
ENSPNAG00000008931	exd1	75	43.011	ENSPCIG00000027845	EXD1	77	42.893	Phascolarctos_cinereus
ENSPNAG00000008931	exd1	77	60.582	ENSPFOG00000013673	-	97	60.582	Poecilia_formosa
ENSPNAG00000008931	exd1	83	58.853	ENSPLAG00000014262	-	75	58.853	Poecilia_latipinna
ENSPNAG00000008931	exd1	83	58.853	ENSPMEG00000012071	-	75	58.853	Poecilia_mexicana
ENSPNAG00000008931	exd1	83	58.853	ENSPREG00000019468	-	75	58.853	Poecilia_reticulata
ENSPNAG00000008931	exd1	62	45.847	ENSPPYG00000006369	EXD1	57	45.847	Pongo_abelii
ENSPNAG00000008931	exd1	76	44.000	ENSPCOG00000026598	EXD1	66	44.000	Propithecus_coquereli
ENSPNAG00000008931	exd1	55	49.254	ENSPVAG00000003149	EXD1	53	49.254	Pteropus_vampyrus
ENSPNAG00000008931	exd1	79	43.035	ENSRNOG00000025360	Exd1	71	43.035	Rattus_norvegicus
ENSPNAG00000008931	exd1	65	45.833	ENSRBIG00000037257	EXD1	95	45.833	Rhinopithecus_bieti
ENSPNAG00000008931	exd1	83	41.725	ENSRROG00000034491	EXD1	73	41.725	Rhinopithecus_roxellana
ENSPNAG00000008931	exd1	76	37.879	ENSSBOG00000024842	EXD1	65	37.879	Saimiri_boliviensis_boliviensis
ENSPNAG00000008931	exd1	84	42.369	ENSSHAG00000016701	EXD1	79	42.369	Sarcophilus_harrisii
ENSPNAG00000008931	exd1	70	51.176	ENSSFOG00015016852	-	92	51.176	Scleropages_formosus
ENSPNAG00000008931	exd1	65	63.669	ENSSMAG00000005451	-	65	63.669	Scophthalmus_maximus
ENSPNAG00000008931	exd1	74	67.590	ENSSDUG00000004368	exd1	64	68.421	Seriola_dumerili
ENSPNAG00000008931	exd1	50	74.486	ENSSLDG00000021803	-	51	74.486	Seriola_lalandi_dorsalis
ENSPNAG00000008931	exd1	55	50.376	ENSSARG00000009556	-	69	43.611	Sorex_araneus
ENSPNAG00000008931	exd1	77	42.021	ENSSPUG00000001716	EXD1	61	42.021	Sphenodon_punctatus
ENSPNAG00000008931	exd1	68	53.191	ENSSPAG00000023228	-	93	54.545	Stegastes_partitus
ENSPNAG00000008931	exd1	76	43.112	ENSSSCG00000004752	EXD1	69	43.112	Sus_scrofa
ENSPNAG00000008931	exd1	79	50.127	ENSTNIG00000017431	-	96	50.127	Tetraodon_nigroviridis
ENSPNAG00000008931	exd1	51	41.463	ENSTBEG00000003085	EXD1	58	41.463	Tupaia_belangeri
ENSPNAG00000008931	exd1	55	48.872	ENSTTRG00000009809	EXD1	52	48.872	Tursiops_truncatus
ENSPNAG00000008931	exd1	76	44.246	ENSUMAG00000012170	EXD1	68	44.246	Ursus_maritimus
ENSPNAG00000008931	exd1	55	48.872	ENSVPAG00000007758	EXD1	52	48.872	Vicugna_pacos
ENSPNAG00000008931	exd1	76	43.333	ENSVVUG00000026704	EXD1	68	43.333	Vulpes_vulpes
ENSPNAG00000008931	exd1	78	39.948	ENSXETG00000017895	exd1	98	39.948	Xenopus_tropicalis
ENSPNAG00000008931	exd1	67	60.123	ENSXCOG00000010879	-	87	60.123	Xiphophorus_couchianus
ENSPNAG00000008931	exd1	68	63.142	ENSXMAG00000014462	-	90	60.121	Xiphophorus_maculatus