EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000009209 (Gene tree)
Gene ID: 108438123
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 13322 bases
Position: chrKV575545.1:753763-767084
Accession: 108438123
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000024583	RtcB	PF01139.17	1.9e-146	1	1
ENSPNAP00000024618	RtcB	PF01139.17	2e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000009745	-	4847	XM_017715710	ENSPNAP00000024618	505 (aa)	XP_017571199	UPI000814256E
ENSPNAT00000009767	-	1494	-	ENSPNAP00000024583	497 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000009209's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000009209's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000009209	rtcb	100	95.248	ENSG00000100220	RTCB	100	95.248	Homo_sapiens
ENSPNAG00000009209	rtcb	100	96.040	ENSAPOG00000006040	rtcb	100	96.040	Acanthochromis_polyacanthus
ENSPNAG00000009209	rtcb	100	95.050	ENSAMEG00000016152	RTCB	100	95.050	Ailuropoda_melanoleuca
ENSPNAG00000009209	rtcb	100	91.485	ENSACIG00000009083	rtcb	100	91.485	Amphilophus_citrinellus
ENSPNAG00000009209	rtcb	100	96.238	ENSAOCG00000005662	rtcb	100	96.739	Amphiprion_ocellaris
ENSPNAG00000009209	rtcb	96	91.170	ENSAPEG00000024653	rtcb	100	91.170	Amphiprion_percula
ENSPNAG00000009209	rtcb	100	96.238	ENSAPEG00000024701	rtcb	100	96.238	Amphiprion_percula
ENSPNAG00000009209	rtcb	100	95.842	ENSATEG00000000618	rtcb	100	95.842	Anabas_testudineus
ENSPNAG00000009209	rtcb	100	91.329	ENSACAG00000014817	RTCB	100	91.329	Anolis_carolinensis
ENSPNAG00000009209	rtcb	100	80.396	ENSANAG00000018191	-	91	80.396	Aotus_nancymaae
ENSPNAG00000009209	rtcb	72	97.222	ENSANAG00000023724	-	84	97.222	Aotus_nancymaae
ENSPNAG00000009209	rtcb	100	95.050	ENSACLG00000008367	rtcb	100	95.435	Astatotilapia_calliptera
ENSPNAG00000009209	rtcb	100	98.218	ENSAMXG00000042320	rtcb	100	98.218	Astyanax_mexicanus
ENSPNAG00000009209	rtcb	100	95.248	ENSBTAG00000011070	RTCB	100	95.248	Bos_taurus
ENSPNAG00000009209	rtcb	100	73.861	WBGene00008877	rtcb-1	100	73.861	Caenorhabditis_elegans
ENSPNAG00000009209	rtcb	100	95.050	ENSCJAG00000006128	RTCB	100	95.050	Callithrix_jacchus
ENSPNAG00000009209	rtcb	100	90.693	ENSCAFG00000010789	-	100	90.693	Canis_familiaris
ENSPNAG00000009209	rtcb	100	95.050	ENSCAFG00000001785	RTCB	100	95.050	Canis_familiaris
ENSPNAG00000009209	rtcb	87	90.682	ENSCAFG00020018953	-	99	90.682	Canis_lupus_dingo
ENSPNAG00000009209	rtcb	100	95.050	ENSCAFG00020004890	-	100	95.050	Canis_lupus_dingo
ENSPNAG00000009209	rtcb	100	95.446	ENSCHIG00000027009	-	100	95.446	Capra_hircus
ENSPNAG00000009209	rtcb	100	95.050	ENSTSYG00000012320	RTCB	100	95.050	Carlito_syrichta
ENSPNAG00000009209	rtcb	94	94.969	ENSCAPG00000011647	RTCB	96	94.969	Cavia_aperea
ENSPNAG00000009209	rtcb	100	95.050	ENSCCAG00000000618	RTCB	100	95.050	Cebus_capucinus
ENSPNAG00000009209	rtcb	100	94.851	ENSCATG00000033424	RTCB	100	94.851	Cercocebus_atys
ENSPNAG00000009209	rtcb	100	94.653	ENSCLAG00000007997	RTCB	100	94.653	Chinchilla_lanigera
ENSPNAG00000009209	rtcb	100	94.653	ENSCSAG00000008351	RTCB	100	94.653	Chlorocebus_sabaeus
ENSPNAG00000009209	rtcb	100	80.792	ENSCHOG00000009123	RTCB	100	80.792	Choloepus_hoffmanni
ENSPNAG00000009209	rtcb	100	94.059	ENSCPBG00000023184	RTCB	100	94.059	Chrysemys_picta_bellii
ENSPNAG00000009209	rtcb	100	82.376	ENSCING00000003830	-	100	82.376	Ciona_intestinalis
ENSPNAG00000009209	rtcb	100	82.772	ENSCSAVG00000008124	-	100	81.777	Ciona_savignyi
ENSPNAG00000009209	rtcb	100	91.089	ENSCANG00000001891	RTCB	100	91.089	Colobus_angolensis_palliatus
ENSPNAG00000009209	rtcb	100	95.248	ENSCGRG00001011173	Rtcb	100	95.248	Cricetulus_griseus_chok1gshd
ENSPNAG00000009209	rtcb	93	95.117	ENSCGRG00000009587	-	96	95.117	Cricetulus_griseus_crigri
ENSPNAG00000009209	rtcb	100	94.653	ENSCSEG00000003986	rtcb	100	94.653	Cynoglossus_semilaevis
ENSPNAG00000009209	rtcb	84	94.231	ENSCVAG00000000569	rtcb	95	94.231	Cyprinodon_variegatus
ENSPNAG00000009209	rtcb	100	96.634	ENSDARG00000101047	rtcb	100	96.634	Danio_rerio
ENSPNAG00000009209	rtcb	80	91.400	ENSDNOG00000012425	RTCB	99	91.400	Dasypus_novemcinctus
ENSPNAG00000009209	rtcb	100	95.248	ENSDORG00000010855	Rtcb	100	95.248	Dipodomys_ordii
ENSPNAG00000009209	rtcb	99	84.095	FBgn0032781	RtcB	99	84.095	Drosophila_melanogaster
ENSPNAG00000009209	rtcb	100	88.911	ENSETEG00000001988	RTCB	100	88.911	Echinops_telfairi
ENSPNAG00000009209	rtcb	100	86.337	ENSEBUG00000014235	rtcb	100	86.337	Eptatretus_burgeri
ENSPNAG00000009209	rtcb	100	95.446	ENSEASG00005019059	RTCB	100	95.446	Equus_asinus_asinus
ENSPNAG00000009209	rtcb	100	95.446	ENSECAG00000023998	RTCB	100	95.446	Equus_caballus
ENSPNAG00000009209	rtcb	90	85.843	ENSEEUG00000006251	RTCB	99	85.874	Erinaceus_europaeus
ENSPNAG00000009209	rtcb	100	83.932	ENSELUG00000009275	rtcb	100	83.932	Esox_lucius
ENSPNAG00000009209	rtcb	100	95.248	ENSFCAG00000026480	RTCB	100	95.248	Felis_catus
ENSPNAG00000009209	rtcb	100	95.248	ENSFALG00000013334	RTCB	100	95.248	Ficedula_albicollis
ENSPNAG00000009209	rtcb	100	95.050	ENSFDAG00000018150	RTCB	100	95.050	Fukomys_damarensis
ENSPNAG00000009209	rtcb	100	95.842	ENSFHEG00000009595	rtcb	100	95.842	Fundulus_heteroclitus
ENSPNAG00000009209	rtcb	100	94.653	ENSGMOG00000018882	rtcb	100	94.653	Gadus_morhua
ENSPNAG00000009209	rtcb	100	94.653	ENSGALG00000012611	RTCB	100	94.653	Gallus_gallus
ENSPNAG00000009209	rtcb	100	95.644	ENSGAFG00000004198	rtcb	100	95.644	Gambusia_affinis
ENSPNAG00000009209	rtcb	100	96.040	ENSGACG00000000586	rtcb	100	96.040	Gasterosteus_aculeatus
ENSPNAG00000009209	rtcb	93	93.617	ENSGAGG00000019133	RTCB	98	93.617	Gopherus_agassizii
ENSPNAG00000009209	rtcb	100	95.248	ENSGGOG00000011402	RTCB	100	95.248	Gorilla_gorilla
ENSPNAG00000009209	rtcb	100	95.050	ENSHBUG00000020571	rtcb	100	95.050	Haplochromis_burtoni
ENSPNAG00000009209	rtcb	100	95.050	ENSHGLG00000004492	RTCB	100	95.050	Heterocephalus_glaber_female
ENSPNAG00000009209	rtcb	93	68.432	ENSHGLG00000001066	-	99	68.432	Heterocephalus_glaber_female
ENSPNAG00000009209	rtcb	100	95.050	ENSHGLG00100008965	RTCB	100	95.050	Heterocephalus_glaber_male
ENSPNAG00000009209	rtcb	100	92.505	ENSHCOG00000006450	rtcb	100	92.505	Hippocampus_comes
ENSPNAG00000009209	rtcb	100	98.020	ENSIPUG00000015443	rtcb	100	98.020	Ictalurus_punctatus
ENSPNAG00000009209	rtcb	100	94.851	ENSSTOG00000003878	RTCB	100	94.851	Ictidomys_tridecemlineatus
ENSPNAG00000009209	rtcb	100	95.248	ENSJJAG00000010667	Rtcb	100	95.248	Jaculus_jaculus
ENSPNAG00000009209	rtcb	100	95.248	ENSKMAG00000013178	rtcb	100	95.248	Kryptolebias_marmoratus
ENSPNAG00000009209	rtcb	100	96.040	ENSLBEG00000010566	RTCB	100	96.040	Labrus_bergylta
ENSPNAG00000009209	rtcb	100	94.851	ENSLBEG00000000214	rtcb	100	94.851	Labrus_bergylta
ENSPNAG00000009209	rtcb	100	94.455	ENSLACG00000013033	RTCB	100	94.455	Latimeria_chalumnae
ENSPNAG00000009209	rtcb	100	96.634	ENSLOCG00000016515	rtcb	99	96.634	Lepisosteus_oculatus
ENSPNAG00000009209	rtcb	100	94.653	ENSLAFG00000002082	RTCB	100	94.653	Loxodonta_africana
ENSPNAG00000009209	rtcb	100	94.653	ENSMFAG00000034419	RTCB	100	94.653	Macaca_fascicularis
ENSPNAG00000009209	rtcb	100	94.653	ENSMMUG00000006720	RTCB	100	94.653	Macaca_mulatta
ENSPNAG00000009209	rtcb	100	94.653	ENSMNEG00000040669	RTCB	100	94.653	Macaca_nemestrina
ENSPNAG00000009209	rtcb	100	94.851	ENSMLEG00000040505	RTCB	100	94.851	Mandrillus_leucophaeus
ENSPNAG00000009209	rtcb	100	95.644	ENSMAMG00000020676	rtcb	100	95.644	Mastacembelus_armatus
ENSPNAG00000009209	rtcb	100	95.050	ENSMZEG00005018942	rtcb	100	95.050	Maylandia_zebra
ENSPNAG00000009209	rtcb	100	94.280	ENSMGAG00000012805	RTCB	100	94.280	Meleagris_gallopavo
ENSPNAG00000009209	rtcb	60	100.000	ENSMAUG00000008301	Rtcb	100	100.000	Mesocricetus_auratus
ENSPNAG00000009209	rtcb	100	95.050	ENSMICG00000013303	-	100	95.050	Microcebus_murinus
ENSPNAG00000009209	rtcb	100	75.842	ENSMICG00000036677	-	100	75.842	Microcebus_murinus
ENSPNAG00000009209	rtcb	100	95.644	ENSMOCG00000002440	Rtcb	100	95.644	Microtus_ochrogaster
ENSPNAG00000009209	rtcb	100	95.446	ENSMMOG00000005987	rtcb	100	95.446	Mola_mola
ENSPNAG00000009209	rtcb	100	95.248	ENSMODG00000001414	RTCB	100	95.248	Monodelphis_domestica
ENSPNAG00000009209	rtcb	100	95.644	ENSMALG00000007603	rtcb	100	95.644	Monopterus_albus
ENSPNAG00000009209	rtcb	100	95.248	MGP_CAROLIEiJ_G0015689	Rtcb	100	95.248	Mus_caroli
ENSPNAG00000009209	rtcb	100	95.248	ENSMUSG00000001783	Rtcb	100	95.248	Mus_musculus
ENSPNAG00000009209	rtcb	100	95.248	MGP_PahariEiJ_G0031396	Rtcb	100	95.248	Mus_pahari
ENSPNAG00000009209	rtcb	100	95.248	MGP_SPRETEiJ_G0016507	Rtcb	100	95.248	Mus_spretus
ENSPNAG00000009209	rtcb	100	95.050	ENSMPUG00000012285	RTCB	100	95.050	Mustela_putorius_furo
ENSPNAG00000009209	rtcb	100	92.308	ENSMLUG00000007803	RTCB	100	92.308	Myotis_lucifugus
ENSPNAG00000009209	rtcb	72	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
ENSPNAG00000009209	rtcb	100	95.248	ENSNBRG00000017202	rtcb	100	95.248	Neolamprologus_brichardi
ENSPNAG00000009209	rtcb	100	95.248	ENSNLEG00000004960	RTCB	100	95.248	Nomascus_leucogenys
ENSPNAG00000009209	rtcb	85	90.625	ENSMEUG00000007809	-	84	90.625	Notamacropus_eugenii
ENSPNAG00000009209	rtcb	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSPNAG00000009209	rtcb	77	100.000	ENSODEG00000013033	-	92	100.000	Octodon_degus
ENSPNAG00000009209	rtcb	100	63.366	ENSODEG00000005042	-	100	63.366	Octodon_degus
ENSPNAG00000009209	rtcb	100	96.040	ENSONIG00000007474	rtcb	100	96.040	Oreochromis_niloticus
ENSPNAG00000009209	rtcb	100	95.050	ENSOANG00000005524	RTCB	100	95.050	Ornithorhynchus_anatinus
ENSPNAG00000009209	rtcb	93	94.681	ENSOCUG00000008270	RTCB	96	94.681	Oryctolagus_cuniculus
ENSPNAG00000009209	rtcb	100	95.446	ENSORLG00000020093	rtcb	100	95.446	Oryzias_latipes
ENSPNAG00000009209	rtcb	100	95.446	ENSORLG00020003706	rtcb	100	95.446	Oryzias_latipes_hni
ENSPNAG00000009209	rtcb	100	95.644	ENSORLG00015002968	rtcb	100	95.644	Oryzias_latipes_hsok
ENSPNAG00000009209	rtcb	100	95.248	ENSOMEG00000021278	rtcb	100	95.248	Oryzias_melastigma
ENSPNAG00000009209	rtcb	100	94.455	ENSOGAG00000001425	RTCB	100	94.455	Otolemur_garnettii
ENSPNAG00000009209	rtcb	100	95.446	ENSOARG00000018008	RTCB	100	95.446	Ovis_aries
ENSPNAG00000009209	rtcb	100	95.248	ENSPPAG00000028667	RTCB	100	95.248	Pan_paniscus
ENSPNAG00000009209	rtcb	100	95.248	ENSPPRG00000004038	RTCB	100	95.248	Panthera_pardus
ENSPNAG00000009209	rtcb	94	90.737	ENSPTIG00000020499	RTCB	97	91.789	Panthera_tigris_altaica
ENSPNAG00000009209	rtcb	100	95.248	ENSPTRG00000014287	RTCB	100	95.248	Pan_troglodytes
ENSPNAG00000009209	rtcb	100	94.653	ENSPANG00000016035	RTCB	100	94.653	Papio_anubis
ENSPNAG00000009209	rtcb	100	96.634	ENSPKIG00000001881	rtcb	100	96.634	Paramormyrops_kingsleyae
ENSPNAG00000009209	rtcb	91	95.000	ENSPSIG00000011690	RTCB	100	95.000	Pelodiscus_sinensis
ENSPNAG00000009209	rtcb	100	95.446	ENSPMGG00000016672	rtcb	100	95.446	Periophthalmus_magnuspinnatus
ENSPNAG00000009209	rtcb	100	95.248	ENSPEMG00000019548	Rtcb	100	95.248	Peromyscus_maniculatus_bairdii
ENSPNAG00000009209	rtcb	100	90.693	ENSPMAG00000005657	rtcb	100	90.693	Petromyzon_marinus
ENSPNAG00000009209	rtcb	100	95.248	ENSPCIG00000009467	RTCB	100	95.248	Phascolarctos_cinereus
ENSPNAG00000009209	rtcb	100	96.040	ENSPFOG00000003058	rtcb	100	96.040	Poecilia_formosa
ENSPNAG00000009209	rtcb	100	96.238	ENSPLAG00000017663	rtcb	100	96.238	Poecilia_latipinna
ENSPNAG00000009209	rtcb	100	96.040	ENSPMEG00000006227	rtcb	100	96.040	Poecilia_mexicana
ENSPNAG00000009209	rtcb	100	95.842	ENSPREG00000018467	rtcb	100	95.842	Poecilia_reticulata
ENSPNAG00000009209	rtcb	100	95.248	ENSPPYG00000011752	RTCB	100	95.248	Pongo_abelii
ENSPNAG00000009209	rtcb	93	78.814	ENSPCAG00000013641	RTCB	100	78.814	Procavia_capensis
ENSPNAG00000009209	rtcb	100	94.851	ENSPCOG00000017243	RTCB	100	94.851	Propithecus_coquereli
ENSPNAG00000009209	rtcb	93	94.255	ENSPVAG00000002380	RTCB	100	94.255	Pteropus_vampyrus
ENSPNAG00000009209	rtcb	100	95.050	ENSPNYG00000022760	rtcb	100	95.050	Pundamilia_nyererei
ENSPNAG00000009209	rtcb	100	95.248	ENSRNOG00000004813	Rtcb	100	95.248	Rattus_norvegicus
ENSPNAG00000009209	rtcb	100	86.364	ENSRBIG00000042090	RTCB	100	86.364	Rhinopithecus_bieti
ENSPNAG00000009209	rtcb	100	90.495	ENSSBOG00000020085	-	100	90.495	Saimiri_boliviensis_boliviensis
ENSPNAG00000009209	rtcb	94	95.359	ENSSHAG00000016277	RTCB	100	95.359	Sarcophilus_harrisii
ENSPNAG00000009209	rtcb	100	95.446	ENSSFOG00015000763	rtcb	100	95.446	Scleropages_formosus
ENSPNAG00000009209	rtcb	100	95.446	ENSSFOG00015011572	RTCB	100	95.446	Scleropages_formosus
ENSPNAG00000009209	rtcb	100	93.465	ENSSMAG00000005096	rtcb	100	93.465	Scophthalmus_maximus
ENSPNAG00000009209	rtcb	100	95.248	ENSSDUG00000012605	rtcb	100	95.248	Seriola_dumerili
ENSPNAG00000009209	rtcb	100	95.050	ENSSLDG00000019458	rtcb	100	95.050	Seriola_lalandi_dorsalis
ENSPNAG00000009209	rtcb	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSPNAG00000009209	rtcb	100	93.267	ENSSPUG00000012814	RTCB	100	93.267	Sphenodon_punctatus
ENSPNAG00000009209	rtcb	100	96.238	ENSSPAG00000004623	rtcb	100	96.238	Stegastes_partitus
ENSPNAG00000009209	rtcb	100	95.248	ENSSSCG00000000158	RTCB	100	95.248	Sus_scrofa
ENSPNAG00000009209	rtcb	100	95.248	ENSTGUG00000010947	RTCB	99	95.248	Taeniopygia_guttata
ENSPNAG00000009209	rtcb	91	96.739	ENSTRUG00000009880	rtcb	100	96.739	Takifugu_rubripes
ENSPNAG00000009209	rtcb	100	94.653	ENSTNIG00000002484	rtcb	100	94.653	Tetraodon_nigroviridis
ENSPNAG00000009209	rtcb	100	81.980	ENSTBEG00000004418	RTCB	100	81.980	Tupaia_belangeri
ENSPNAG00000009209	rtcb	93	94.043	ENSTTRG00000006417	RTCB	100	94.043	Tursiops_truncatus
ENSPNAG00000009209	rtcb	100	95.050	ENSUAMG00000022792	RTCB	100	95.050	Ursus_americanus
ENSPNAG00000009209	rtcb	100	95.050	ENSUMAG00000017225	RTCB	100	95.050	Ursus_maritimus
ENSPNAG00000009209	rtcb	100	95.050	ENSVPAG00000005375	RTCB	100	95.050	Vicugna_pacos
ENSPNAG00000009209	rtcb	100	95.050	ENSVVUG00000023408	RTCB	100	95.086	Vulpes_vulpes
ENSPNAG00000009209	rtcb	100	93.267	ENSXETG00000011523	rtcb	100	93.267	Xenopus_tropicalis
ENSPNAG00000009209	rtcb	100	95.644	ENSXMAG00000002855	rtcb	100	95.644	Xiphophorus_maculatus