EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000009247 (Gene tree)
Gene ID: 108426993
Gene Symbol: prpf8
Alias: id:ibd1257|ik:tdsubc_2a9|im:7141966|tdsubc_2a9|wu:fb37c02|wu:fb73e06|xx:tdsubc_2a9|zgc:56504
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 12110 bases
Position: chrKV575332.1:3037574-3049683
Accession: 108426993
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000002818	RRM_4	PF10598.9	3.8e-48	1	1
ENSPNAP00000002818	U5_2-snRNA_bdg	PF10597.9	8.3e-74	1	1
ENSPNAP00000002818	PRO8NT	PF08082.11	2.6e-87	1	1
ENSPNAP00000002818	U6-snRNA_bdg	PF10596.9	2e-89	1	1
ENSPNAP00000002818	PROCN	PF08083.11	4.7e-236	1	1
ENSPNAP00000002818	PRP8_domainIV	PF12134.8	4.9e-130	1	1
ENSPNAP00000002818	PROCT	PF08084.11	5.7e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000009777	-	7017	XM_017696861	ENSPNAP00000002818	2338 (aa)	XP_017552350	UPI0008145090

Gene Model

Click here to download ENSPNAG00000009247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000009247's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000009247	prpf8	100	97.648	ENSG00000174231	PRPF8	100	97.648	Homo_sapiens
ENSPNAG00000009247	prpf8	100	99.145	ENSAPOG00000010079	prpf8	100	99.145	Acanthochromis_polyacanthus
ENSPNAG00000009247	prpf8	100	97.648	ENSAMEG00000007940	PRPF8	100	97.648	Ailuropoda_melanoleuca
ENSPNAG00000009247	prpf8	100	97.070	ENSACIG00000018280	prpf8	100	97.070	Amphilophus_citrinellus
ENSPNAG00000009247	prpf8	100	99.102	ENSAOCG00000010725	prpf8	100	99.102	Amphiprion_ocellaris
ENSPNAG00000009247	prpf8	100	99.102	ENSAPEG00000014397	prpf8	100	99.102	Amphiprion_percula
ENSPNAG00000009247	prpf8	100	98.503	ENSATEG00000010062	prpf8	100	98.503	Anabas_testudineus
ENSPNAG00000009247	prpf8	96	98.221	ENSAPLG00000010357	PRPF8	100	98.221	Anas_platyrhynchos
ENSPNAG00000009247	prpf8	83	96.134	ENSACAG00000014784	PRPF8	99	96.134	Anolis_carolinensis
ENSPNAG00000009247	prpf8	100	97.648	ENSANAG00000032629	PRPF8	100	97.648	Aotus_nancymaae
ENSPNAG00000009247	prpf8	100	98.383	ENSACLG00000020858	prpf8	100	98.383	Astatotilapia_calliptera
ENSPNAG00000009247	prpf8	100	99.273	ENSAMXG00000020291	prpf8	100	99.273	Astyanax_mexicanus
ENSPNAG00000009247	prpf8	100	97.648	ENSBTAG00000011488	PRPF8	100	97.648	Bos_taurus
ENSPNAG00000009247	prpf8	99	86.399	WBGene00004187	prp-8	99	86.833	Caenorhabditis_elegans
ENSPNAG00000009247	prpf8	100	97.648	ENSCJAG00000001911	PRPF8	100	97.648	Callithrix_jacchus
ENSPNAG00000009247	prpf8	100	97.648	ENSCAFG00000019221	PRPF8	100	97.648	Canis_familiaris
ENSPNAG00000009247	prpf8	96	98.170	ENSCAFG00020009943	PRPF8	100	98.170	Canis_lupus_dingo
ENSPNAG00000009247	prpf8	100	97.648	ENSCHIG00000017499	PRPF8	100	97.648	Capra_hircus
ENSPNAG00000009247	prpf8	100	97.648	ENSTSYG00000014120	PRPF8	100	97.648	Carlito_syrichta
ENSPNAG00000009247	prpf8	96	95.947	ENSCAPG00000009459	PRPF8	99	95.947	Cavia_aperea
ENSPNAG00000009247	prpf8	100	97.648	ENSCPOG00000010379	PRPF8	100	97.648	Cavia_porcellus
ENSPNAG00000009247	prpf8	100	97.648	ENSCCAG00000031983	-	100	97.648	Cebus_capucinus
ENSPNAG00000009247	prpf8	100	97.648	ENSCATG00000038595	PRPF8	100	97.648	Cercocebus_atys
ENSPNAG00000009247	prpf8	100	97.648	ENSCLAG00000004388	PRPF8	100	97.648	Chinchilla_lanigera
ENSPNAG00000009247	prpf8	100	97.648	ENSCSAG00000013929	PRPF8	100	97.648	Chlorocebus_sabaeus
ENSPNAG00000009247	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	88	97.333	Choloepus_hoffmanni
ENSPNAG00000009247	prpf8	100	97.733	ENSCPBG00000020409	PRPF8	100	97.733	Chrysemys_picta_bellii
ENSPNAG00000009247	prpf8	98	92.993	ENSCSAVG00000007825	-	100	91.409	Ciona_savignyi
ENSPNAG00000009247	prpf8	100	97.648	ENSCANG00000043088	PRPF8	100	97.648	Colobus_angolensis_palliatus
ENSPNAG00000009247	prpf8	73	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSPNAG00000009247	prpf8	100	99.145	ENSCSEG00000007905	prpf8	100	99.145	Cynoglossus_semilaevis
ENSPNAG00000009247	prpf8	100	98.847	ENSDARG00000026180	prpf8	100	98.847	Danio_rerio
ENSPNAG00000009247	prpf8	93	97.839	ENSDNOG00000018471	PRPF8	99	97.839	Dasypus_novemcinctus
ENSPNAG00000009247	prpf8	84	96.317	ENSDORG00000006185	Prpf8	96	96.317	Dipodomys_ordii
ENSPNAG00000009247	prpf8	99	91.403	FBgn0033688	Prp8	97	91.403	Drosophila_melanogaster
ENSPNAG00000009247	prpf8	100	92.344	ENSETEG00000017592	PRPF8	100	92.344	Echinops_telfairi
ENSPNAG00000009247	prpf8	99	93.348	ENSEBUG00000006548	prpf8	99	93.348	Eptatretus_burgeri
ENSPNAG00000009247	prpf8	100	97.648	ENSEASG00005009514	PRPF8	100	97.648	Equus_asinus_asinus
ENSPNAG00000009247	prpf8	97	98.198	ENSECAG00000021318	PRPF8	100	98.198	Equus_caballus
ENSPNAG00000009247	prpf8	67	98.519	ENSEEUG00000012120	-	67	98.519	Erinaceus_europaeus
ENSPNAG00000009247	prpf8	98	97.684	ENSELUG00000007120	prpf8	99	97.684	Esox_lucius
ENSPNAG00000009247	prpf8	100	97.648	ENSFCAG00000006297	PRPF8	100	97.648	Felis_catus
ENSPNAG00000009247	prpf8	100	97.819	ENSFALG00000006628	PRPF8	100	97.819	Ficedula_albicollis
ENSPNAG00000009247	prpf8	100	97.648	ENSFDAG00000004711	PRPF8	100	97.648	Fukomys_damarensis
ENSPNAG00000009247	prpf8	100	98.463	ENSFHEG00000021084	prpf8	100	98.463	Fundulus_heteroclitus
ENSPNAG00000009247	prpf8	100	96.701	ENSGMOG00000002028	prpf8	99	96.701	Gadus_morhua
ENSPNAG00000009247	prpf8	100	97.819	ENSGALG00000002943	PRPF8	100	97.819	Gallus_gallus
ENSPNAG00000009247	prpf8	99	98.670	ENSGAFG00000010337	prpf8	99	98.670	Gambusia_affinis
ENSPNAG00000009247	prpf8	100	98.888	ENSGACG00000008504	prpf8	100	98.888	Gasterosteus_aculeatus
ENSPNAG00000009247	prpf8	100	97.776	ENSGAGG00000008350	PRPF8	100	97.776	Gopherus_agassizii
ENSPNAG00000009247	prpf8	100	97.648	ENSGGOG00000005516	PRPF8	100	97.648	Gorilla_gorilla
ENSPNAG00000009247	prpf8	100	98.717	ENSHBUG00000016192	prpf8	100	98.717	Haplochromis_burtoni
ENSPNAG00000009247	prpf8	100	97.648	ENSHGLG00000012029	PRPF8	100	97.648	Heterocephalus_glaber_female
ENSPNAG00000009247	prpf8	100	97.648	ENSHGLG00100016494	PRPF8	100	97.648	Heterocephalus_glaber_male
ENSPNAG00000009247	prpf8	100	98.803	ENSHCOG00000016414	prpf8	100	98.803	Hippocampus_comes
ENSPNAG00000009247	prpf8	100	99.316	ENSIPUG00000023230	prpf8	100	99.316	Ictalurus_punctatus
ENSPNAG00000009247	prpf8	100	97.648	ENSSTOG00000005128	PRPF8	100	97.648	Ictidomys_tridecemlineatus
ENSPNAG00000009247	prpf8	100	95.509	ENSJJAG00000021159	Prpf8	100	95.509	Jaculus_jaculus
ENSPNAG00000009247	prpf8	99	98.841	ENSKMAG00000016118	prpf8	99	98.841	Kryptolebias_marmoratus
ENSPNAG00000009247	prpf8	100	99.059	ENSLBEG00000026903	prpf8	100	99.059	Labrus_bergylta
ENSPNAG00000009247	prpf8	95	95.629	ENSLACG00000010479	PRPF8	99	98.357	Latimeria_chalumnae
ENSPNAG00000009247	prpf8	99	98.546	ENSLOCG00000005409	prpf8	99	98.546	Lepisosteus_oculatus
ENSPNAG00000009247	prpf8	100	97.648	ENSLAFG00000015445	PRPF8	100	97.648	Loxodonta_africana
ENSPNAG00000009247	prpf8	100	97.648	ENSMFAG00000039995	PRPF8	100	97.648	Macaca_fascicularis
ENSPNAG00000009247	prpf8	100	97.648	ENSMMUG00000004820	PRPF8	100	97.648	Macaca_mulatta
ENSPNAG00000009247	prpf8	100	97.648	ENSMNEG00000035713	PRPF8	100	97.648	Macaca_nemestrina
ENSPNAG00000009247	prpf8	100	97.648	ENSMLEG00000037937	PRPF8	100	97.648	Mandrillus_leucophaeus
ENSPNAG00000009247	prpf8	100	99.145	ENSMAMG00000008919	prpf8	100	99.145	Mastacembelus_armatus
ENSPNAG00000009247	prpf8	100	98.383	ENSMZEG00005015073	prpf8	100	98.383	Maylandia_zebra
ENSPNAG00000009247	prpf8	100	97.819	ENSMGAG00000004769	PRPF8	100	97.819	Meleagris_gallopavo
ENSPNAG00000009247	prpf8	100	97.648	ENSMICG00000010320	PRPF8	100	97.648	Microcebus_murinus
ENSPNAG00000009247	prpf8	100	97.648	ENSMOCG00000016838	Prpf8	100	97.648	Microtus_ochrogaster
ENSPNAG00000009247	prpf8	100	98.631	ENSMMOG00000011887	prpf8	100	98.631	Mola_mola
ENSPNAG00000009247	prpf8	100	97.648	ENSMODG00000010480	PRPF8	100	97.648	Monodelphis_domestica
ENSPNAG00000009247	prpf8	97	98.262	ENSMALG00000003558	prpf8	100	98.262	Monopterus_albus
ENSPNAG00000009247	prpf8	100	97.605	MGP_CAROLIEiJ_G0016740	Prpf8	100	97.605	Mus_caroli
ENSPNAG00000009247	prpf8	100	97.605	ENSMUSG00000020850	Prpf8	100	97.605	Mus_musculus
ENSPNAG00000009247	prpf8	100	97.562	MGP_PahariEiJ_G0017877	Prpf8	100	97.562	Mus_pahari
ENSPNAG00000009247	prpf8	100	97.605	MGP_SPRETEiJ_G0017583	Prpf8	100	97.605	Mus_spretus
ENSPNAG00000009247	prpf8	100	97.648	ENSMPUG00000013227	PRPF8	100	97.648	Mustela_putorius_furo
ENSPNAG00000009247	prpf8	100	97.522	ENSMLUG00000002666	PRPF8	100	97.522	Myotis_lucifugus
ENSPNAG00000009247	prpf8	100	95.894	ENSNGAG00000005305	Prpf8	100	95.894	Nannospalax_galili
ENSPNAG00000009247	prpf8	100	98.426	ENSNBRG00000013127	prpf8	100	98.426	Neolamprologus_brichardi
ENSPNAG00000009247	prpf8	97	96.698	ENSNLEG00000000897	PRPF8	98	96.698	Nomascus_leucogenys
ENSPNAG00000009247	prpf8	98	96.349	ENSMEUG00000015999	PRPF8	100	96.349	Notamacropus_eugenii
ENSPNAG00000009247	prpf8	100	95.894	ENSOPRG00000003102	PRPF8	100	95.894	Ochotona_princeps
ENSPNAG00000009247	prpf8	100	97.648	ENSODEG00000008468	PRPF8	100	97.648	Octodon_degus
ENSPNAG00000009247	prpf8	100	98.383	ENSONIG00000008153	prpf8	100	98.383	Oreochromis_niloticus
ENSPNAG00000009247	prpf8	82	99.252	ENSOANG00000004250	PRPF8	97	99.252	Ornithorhynchus_anatinus
ENSPNAG00000009247	prpf8	100	97.648	ENSOCUG00000000081	PRPF8	100	97.648	Oryctolagus_cuniculus
ENSPNAG00000009247	prpf8	100	97.961	ENSORLG00000008036	prpf8	100	97.961	Oryzias_latipes
ENSPNAG00000009247	prpf8	100	97.919	ENSORLG00020021070	prpf8	100	97.919	Oryzias_latipes_hni
ENSPNAG00000009247	prpf8	100	97.961	ENSORLG00015002340	prpf8	100	97.961	Oryzias_latipes_hsok
ENSPNAG00000009247	prpf8	100	96.474	ENSOMEG00000016866	prpf8	100	96.474	Oryzias_melastigma
ENSPNAG00000009247	prpf8	100	97.522	ENSOARG00000013312	PRPF8	100	97.522	Ovis_aries
ENSPNAG00000009247	prpf8	100	97.648	ENSPPAG00000042753	PRPF8	100	97.648	Pan_paniscus
ENSPNAG00000009247	prpf8	100	97.648	ENSPPRG00000008746	PRPF8	100	97.648	Panthera_pardus
ENSPNAG00000009247	prpf8	100	97.562	ENSPTIG00000019200	PRPF8	100	97.562	Panthera_tigris_altaica
ENSPNAG00000009247	prpf8	100	97.648	ENSPTRG00000039576	PRPF8	100	97.648	Pan_troglodytes
ENSPNAG00000009247	prpf8	98	98.175	ENSPANG00000024607	PRPF8	98	98.175	Papio_anubis
ENSPNAG00000009247	prpf8	100	98.465	ENSPKIG00000011201	prpf8	100	98.465	Paramormyrops_kingsleyae
ENSPNAG00000009247	prpf8	100	97.690	ENSPSIG00000013393	PRPF8	100	97.690	Pelodiscus_sinensis
ENSPNAG00000009247	prpf8	100	97.648	ENSPEMG00000021699	Prpf8	100	97.648	Peromyscus_maniculatus_bairdii
ENSPNAG00000009247	prpf8	96	93.898	ENSPMAG00000005438	prpf8	100	93.942	Petromyzon_marinus
ENSPNAG00000009247	prpf8	100	97.648	ENSPCIG00000022603	PRPF8	100	98.170	Phascolarctos_cinereus
ENSPNAG00000009247	prpf8	100	98.007	ENSPFOG00000007005	prpf8	100	97.964	Poecilia_formosa
ENSPNAG00000009247	prpf8	100	97.220	ENSPLAG00000020777	prpf8	100	97.220	Poecilia_latipinna
ENSPNAG00000009247	prpf8	100	98.007	ENSPMEG00000004051	prpf8	100	97.964	Poecilia_mexicana
ENSPNAG00000009247	prpf8	100	98.760	ENSPREG00000021902	prpf8	100	98.760	Poecilia_reticulata
ENSPNAG00000009247	prpf8	100	97.648	ENSPPYG00000007777	PRPF8	100	97.648	Pongo_abelii
ENSPNAG00000009247	prpf8	90	96.782	ENSPCAG00000008938	PRPF8	90	96.782	Procavia_capensis
ENSPNAG00000009247	prpf8	100	97.648	ENSPCOG00000015182	PRPF8	100	97.648	Propithecus_coquereli
ENSPNAG00000009247	prpf8	93	98.559	ENSPVAG00000002134	PRPF8	93	98.559	Pteropus_vampyrus
ENSPNAG00000009247	prpf8	100	98.717	ENSPNYG00000016356	prpf8	100	98.717	Pundamilia_nyererei
ENSPNAG00000009247	prpf8	100	97.605	ENSRNOG00000003495	Prpf8	100	97.605	Rattus_norvegicus
ENSPNAG00000009247	prpf8	100	97.648	ENSRBIG00000031219	PRPF8	100	97.724	Rhinopithecus_bieti
ENSPNAG00000009247	prpf8	100	97.648	ENSRROG00000038014	PRPF8	100	97.724	Rhinopithecus_roxellana
ENSPNAG00000009247	prpf8	99	62.559	YHR165C	PRP8	97	61.871	Saccharomyces_cerevisiae
ENSPNAG00000009247	prpf8	100	97.648	ENSSBOG00000029717	PRPF8	100	97.648	Saimiri_boliviensis_boliviensis
ENSPNAG00000009247	prpf8	100	97.605	ENSSHAG00000006167	PRPF8	100	97.605	Sarcophilus_harrisii
ENSPNAG00000009247	prpf8	100	98.719	ENSSFOG00015013905	prpf8	100	98.719	Scleropages_formosus
ENSPNAG00000009247	prpf8	100	98.888	ENSSMAG00000017736	prpf8	100	98.888	Scophthalmus_maximus
ENSPNAG00000009247	prpf8	100	99.145	ENSSDUG00000003029	prpf8	100	99.145	Seriola_dumerili
ENSPNAG00000009247	prpf8	68	99.437	ENSSLDG00000017096	prpf8	100	99.437	Seriola_lalandi_dorsalis
ENSPNAG00000009247	prpf8	87	94.408	ENSSARG00000002892	PRPF8	87	94.408	Sorex_araneus
ENSPNAG00000009247	prpf8	100	97.562	ENSSPUG00000007463	PRPF8	100	97.562	Sphenodon_punctatus
ENSPNAG00000009247	prpf8	100	98.546	ENSSPAG00000015639	prpf8	100	98.546	Stegastes_partitus
ENSPNAG00000009247	prpf8	100	97.648	ENSSSCG00000017817	PRPF8	100	97.648	Sus_scrofa
ENSPNAG00000009247	prpf8	52	98.429	ENSTGUG00000015597	-	95	98.429	Taeniopygia_guttata
ENSPNAG00000009247	prpf8	100	97.819	ENSTGUG00000005648	-	100	97.819	Taeniopygia_guttata
ENSPNAG00000009247	prpf8	100	98.845	ENSTRUG00000015906	prpf8	100	98.845	Takifugu_rubripes
ENSPNAG00000009247	prpf8	95	99.403	ENSTNIG00000003460	prpf8	99	99.403	Tetraodon_nigroviridis
ENSPNAG00000009247	prpf8	93	98.843	ENSTBEG00000006431	PRPF8	93	98.843	Tupaia_belangeri
ENSPNAG00000009247	prpf8	100	97.049	ENSTTRG00000006869	PRPF8	100	97.049	Tursiops_truncatus
ENSPNAG00000009247	prpf8	54	96.434	ENSUAMG00000015644	-	96	96.434	Ursus_americanus
ENSPNAG00000009247	prpf8	100	97.391	ENSUMAG00000009385	PRPF8	100	97.391	Ursus_maritimus
ENSPNAG00000009247	prpf8	71	98.621	ENSVPAG00000006063	-	71	98.621	Vicugna_pacos
ENSPNAG00000009247	prpf8	100	97.648	ENSVVUG00000021695	PRPF8	99	97.648	Vulpes_vulpes
ENSPNAG00000009247	prpf8	100	97.563	ENSXETG00000022259	prpf8	100	97.563	Xenopus_tropicalis
ENSPNAG00000009247	prpf8	100	98.590	ENSXCOG00000012775	prpf8	100	98.590	Xiphophorus_couchianus
ENSPNAG00000009247	prpf8	100	98.633	ENSXMAG00000008505	prpf8	100	98.633	Xiphophorus_maculatus