EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000009350 (Gene tree)
Gene ID: -
Gene Symbol: mrps18c
Alias: si:ch211-85e10.6
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 3060 bases
Position: chrKV575293.1:1220032-1223091
Accession: 108437162
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000024652	Ribosomal_S18	PF01084.20	2.9e-24	1	1
ENSPNAP00000024672	Ribosomal_S18	PF01084.20	5.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000009564	-	420	XM_017714082	ENSPNAP00000024672	139 (aa)	XP_017569571	-
ENSPNAT00000009570	-	324	-	ENSPNAP00000024652	107 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000009350's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000009350's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000009350	mrps18c	93	76.000	ENSAPOG00000019045	mrps18c	77	76.000	Acanthochromis_polyacanthus
ENSPNAG00000009350	mrps18c	85	72.527	ENSACIG00000020253	mrps18c	96	69.388	Amphilophus_citrinellus
ENSPNAG00000009350	mrps18c	93	72.000	ENSAOCG00000014338	mrps18c	77	72.000	Amphiprion_ocellaris
ENSPNAG00000009350	mrps18c	93	72.000	ENSAPEG00000022956	mrps18c	77	72.000	Amphiprion_percula
ENSPNAG00000009350	mrps18c	81	75.862	ENSAPEG00000023068	-	95	68.627	Amphiprion_percula
ENSPNAG00000009350	mrps18c	91	71.134	ENSATEG00000023417	mrps18c	75	71.134	Anabas_testudineus
ENSPNAG00000009350	mrps18c	84	60.000	ENSAPLG00000012544	-	87	60.000	Anas_platyrhynchos
ENSPNAG00000009350	mrps18c	85	75.824	ENSACLG00000010521	mrps18c	96	72.449	Astatotilapia_calliptera
ENSPNAG00000009350	mrps18c	86	85.870	ENSAMXG00000012238	mrps18c	93	85.870	Astyanax_mexicanus
ENSPNAG00000009350	mrps18c	90	63.542	ENSCPBG00000007783	-	59	63.542	Chrysemys_picta_bellii
ENSPNAG00000009350	mrps18c	83	67.416	ENSCSEG00000000711	mrps18c	92	51.000	Cynoglossus_semilaevis
ENSPNAG00000009350	mrps18c	85	70.330	ENSCVAG00000020169	mrps18c	72	70.330	Cyprinodon_variegatus
ENSPNAG00000009350	mrps18c	92	72.449	ENSDARG00000069624	mrps18c	99	62.044	Danio_rerio
ENSPNAG00000009350	mrps18c	88	74.468	ENSELUG00000024603	mrps18c	70	75.532	Esox_lucius
ENSPNAG00000009350	mrps18c	94	65.347	ENSFHEG00000015550	mrps18c	75	65.347	Fundulus_heteroclitus
ENSPNAG00000009350	mrps18c	91	68.041	ENSFHEG00000018752	-	76	68.041	Fundulus_heteroclitus
ENSPNAG00000009350	mrps18c	90	59.375	ENSGALG00000023191	MRPS18C	67	59.375	Gallus_gallus
ENSPNAG00000009350	mrps18c	85	70.330	ENSGAFG00000008048	mrps18c	62	67.708	Gambusia_affinis
ENSPNAG00000009350	mrps18c	90	64.583	ENSGAGG00000015144	-	68	64.583	Gopherus_agassizii
ENSPNAG00000009350	mrps18c	85	75.824	ENSHBUG00000002008	mrps18c	70	75.824	Haplochromis_burtoni
ENSPNAG00000009350	mrps18c	90	71.875	ENSHCOG00000013161	mrps18c	100	55.714	Hippocampus_comes
ENSPNAG00000009350	mrps18c	86	88.043	ENSIPUG00000003783	mrps18c	89	88.043	Ictalurus_punctatus
ENSPNAG00000009350	mrps18c	91	69.072	ENSKMAG00000016467	mrps18c	76	69.072	Kryptolebias_marmoratus
ENSPNAG00000009350	mrps18c	93	71.000	ENSLBEG00000021861	mrps18c	98	61.417	Labrus_bergylta
ENSPNAG00000009350	mrps18c	93	71.000	ENSLBEG00000019174	mrps18c	98	61.417	Labrus_bergylta
ENSPNAG00000009350	mrps18c	90	66.667	ENSLACG00000011243	mrps18c	75	66.667	Latimeria_chalumnae
ENSPNAG00000009350	mrps18c	98	66.667	ENSLOCG00000012115	mrps18c	81	66.667	Lepisosteus_oculatus
ENSPNAG00000009350	mrps18c	85	72.527	ENSMAMG00000012386	mrps18c	85	59.200	Mastacembelus_armatus
ENSPNAG00000009350	mrps18c	85	75.824	ENSMZEG00005023278	mrps18c	70	75.824	Maylandia_zebra
ENSPNAG00000009350	mrps18c	97	68.224	ENSMMOG00000011316	mrps18c	82	68.224	Mola_mola
ENSPNAG00000009350	mrps18c	85	75.824	ENSNBRG00000006182	mrps18c	70	75.824	Neolamprologus_brichardi
ENSPNAG00000009350	mrps18c	84	68.889	ENSMEUG00000010972	-	71	68.889	Notamacropus_eugenii
ENSPNAG00000009350	mrps18c	87	76.344	ENSONIG00000012527	mrps18c	96	74.227	Oreochromis_niloticus
ENSPNAG00000009350	mrps18c	91	71.134	ENSORLG00015006869	mrps18c	75	71.134	Oryzias_latipes_hsok
ENSPNAG00000009350	mrps18c	97	68.269	ENSOMEG00000005009	mrps18c	97	68.269	Oryzias_melastigma
ENSPNAG00000009350	mrps18c	87	74.194	ENSPKIG00000021736	mrps18c	99	56.522	Paramormyrops_kingsleyae
ENSPNAG00000009350	mrps18c	84	74.444	ENSPMGG00000002991	mrps18c	91	74.444	Periophthalmus_magnuspinnatus
ENSPNAG00000009350	mrps18c	93	61.905	ENSPFOG00000002351	mrps18c	68	61.905	Poecilia_formosa
ENSPNAG00000009350	mrps18c	93	61.905	ENSPLAG00000015187	mrps18c	82	61.905	Poecilia_latipinna
ENSPNAG00000009350	mrps18c	93	61.905	ENSPMEG00000014488	mrps18c	68	61.905	Poecilia_mexicana
ENSPNAG00000009350	mrps18c	78	69.880	ENSPREG00000012593	mrps18c	85	69.880	Poecilia_reticulata
ENSPNAG00000009350	mrps18c	85	74.725	ENSPNYG00000010654	mrps18c	70	74.725	Pundamilia_nyererei
ENSPNAG00000009350	mrps18c	87	72.043	ENSSFOG00015019444	mrps18c	91	58.268	Scleropages_formosus
ENSPNAG00000009350	mrps18c	85	78.022	ENSSDUG00000015676	mrps18c	71	78.022	Seriola_dumerili
ENSPNAG00000009350	mrps18c	85	78.022	ENSSLDG00000002034	mrps18c	71	78.022	Seriola_lalandi_dorsalis
ENSPNAG00000009350	mrps18c	88	63.830	ENSSPUG00000013990	-	69	63.830	Sphenodon_punctatus
ENSPNAG00000009350	mrps18c	93	67.677	ENSSPAG00000008687	mrps18c	77	67.677	Stegastes_partitus
ENSPNAG00000009350	mrps18c	85	70.330	ENSTRUG00000024403	mrps18c	73	67.368	Takifugu_rubripes
ENSPNAG00000009350	mrps18c	91	69.072	ENSTNIG00000005674	mrps18c	75	69.072	Tetraodon_nigroviridis
ENSPNAG00000009350	mrps18c	82	69.318	ENSXETG00000027597	mrps18c	91	56.667	Xenopus_tropicalis
ENSPNAG00000009350	mrps18c	85	68.132	ENSXCOG00000016208	mrps18c	89	69.663	Xiphophorus_couchianus
ENSPNAG00000009350	mrps18c	93	62.857	ENSXMAG00000012555	mrps18c	68	62.857	Xiphophorus_maculatus