EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000009621 (Gene tree)
Gene ID: 108437652
Gene Symbol: SRRM3
Alias: FLJ37078
Full Name: serine/arginine repetitive matrix 3
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 124158 bases
Position: chrKV575526.1:775227-899384
Accession: 108437652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000003223	cwf21	PF08312.12	5e-15	1	1
ENSPNAP00000003223	SRRM_C	PF15230.6	1.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000009092	SRRM3-201	5358	XM_017714884	ENSPNAP00000003223	638 (aa)	XP_017570373	-

Gene Model

Click here to download ENSPNAG00000009621's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000009621's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000009621	SRRM3	87	58.092	ENSAPOG00000000288	SRRM3	87	56.463	Acanthochromis_polyacanthus
ENSPNAG00000009621	SRRM3	87	56.581	ENSACLG00000005269	SRRM3	87	54.110	Astatotilapia_calliptera
ENSPNAG00000009621	SRRM3	87	86.101	ENSAMXG00000016051	-	87	83.935	Astyanax_mexicanus
ENSPNAG00000009621	SRRM3	86	49.141	ENSCPBG00000027784	SRRM3	90	49.231	Chrysemys_picta_bellii
ENSPNAG00000009621	SRRM3	87	54.746	ENSCSEG00000010978	-	80	53.220	Cynoglossus_semilaevis
ENSPNAG00000009621	SRRM3	87	52.881	ENSGAFG00000014777	SRRM3	87	53.072	Gambusia_affinis
ENSPNAG00000009621	SRRM3	87	49.233	ENSGAGG00000021058	SRRM3	96	48.881	Gopherus_agassizii
ENSPNAG00000009621	SRRM3	87	57.070	ENSHBUG00000005061	SRRM3	87	54.701	Haplochromis_burtoni
ENSPNAG00000009621	SRRM3	87	78.495	ENSIPUG00000012467	srrm3	87	76.165	Ictalurus_punctatus
ENSPNAG00000009621	SRRM3	87	54.223	ENSKMAG00000013495	SRRM3	87	54.746	Kryptolebias_marmoratus
ENSPNAG00000009621	SRRM3	77	43.309	ENSLACG00000008008	SRRM3	96	42.155	Latimeria_chalumnae
ENSPNAG00000009621	SRRM3	52	61.128	ENSLOCG00000002879	SRRM3	99	61.834	Lepisosteus_oculatus
ENSPNAG00000009621	SRRM3	88	56.449	ENSMALG00000000844	-	89	54.608	Monopterus_albus
ENSPNAG00000009621	SRRM3	52	49.573	ENSONIG00000012732	-	97	48.376	Oreochromis_niloticus
ENSPNAG00000009621	SRRM3	87	54.992	ENSORLG00000026242	-	89	53.912	Oryzias_latipes
ENSPNAG00000009621	SRRM3	87	54.992	ENSORLG00020016592	-	89	53.741	Oryzias_latipes_hni
ENSPNAG00000009621	SRRM3	87	54.992	ENSORLG00015022712	SRRM3	89	53.912	Oryzias_latipes_hsok
ENSPNAG00000009621	SRRM3	87	53.457	ENSOMEG00000010768	-	88	53.638	Oryzias_melastigma
ENSPNAG00000009621	SRRM3	87	57.068	ENSPKIG00000017233	SRRM3	92	56.098	Paramormyrops_kingsleyae
ENSPNAG00000009621	SRRM3	65	61.272	ENSPFOG00000009007	SRRM3	89	45.704	Poecilia_formosa
ENSPNAG00000009621	SRRM3	87	54.096	ENSPMEG00000011981	-	87	52.211	Poecilia_mexicana
ENSPNAG00000009621	SRRM3	87	54.329	ENSPREG00000008138	-	87	53.480	Poecilia_reticulata
ENSPNAG00000009621	SRRM3	59	58.073	ENSSFOG00015001696	SRRM3	90	58.290	Scleropages_formosus
ENSPNAG00000009621	SRRM3	87	57.313	ENSSMAG00000000476	SRRM3	88	55.782	Scophthalmus_maximus
ENSPNAG00000009621	SRRM3	87	57.525	ENSSLDG00000020070	SRRM3	87	56.544	Seriola_lalandi_dorsalis
ENSPNAG00000009621	SRRM3	80	48.155	ENSTNIG00000008549	-	85	47.660	Tetraodon_nigroviridis
ENSPNAG00000009621	SRRM3	87	52.632	ENSXMAG00000005663	-	87	52.122	Xiphophorus_maculatus