EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000009990 (Gene tree)
Gene ID: 108434235
Gene Symbol: si:dkey-37o8.1
Alias: fi12b10|wu:fi12b10
Full Name: elongation factor 1-alpha-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 5747 bases
Position: chrKV575438.1:794117-799863
Accession: 108434235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000003552	GTP_EFTU	PF00009.27	3e-53	1	1
ENSPNAP00000025097	GTP_EFTU	PF00009.27	3.1e-53	1	1
ENSPNAP00000003552	GTP_EFTU_D2	PF03144.25	3.5e-11	1	1
ENSPNAP00000025097	GTP_EFTU_D2	PF03144.25	4.2e-11	1	1
ENSPNAP00000003552	GTP_EFTU_D3	PF03143.17	2.8e-35	1	1
ENSPNAP00000025097	GTP_EFTU_D3	PF03143.17	2.9e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000008527	-	2261	XM_017709230	ENSPNAP00000003552	458 (aa)	XP_017564719	UPI000814A1DD
ENSPNAT00000008518	-	1371	-	ENSPNAP00000025097	456 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000009990's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000009990's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000009990	si:dkey-37o8.1	99	72.767	ENSPNAG00000008054	eef1a2	99	72.767
ENSPNAG00000009990	si:dkey-37o8.1	96	40.091	ENSPNAG00000026721	hbs1l	66	40.230
ENSPNAG00000009990	si:dkey-37o8.1	100	72.078	ENSPNAG00000008912	EEF1A1	100	72.078
ENSPNAG00000009990	si:dkey-37o8.1	100	71.429	ENSPNAG00000026137	-	100	71.429
ENSPNAG00000009990	si:dkey-37o8.1	95	37.644	ENSPNAG00000011819	gspt1	75	37.443
ENSPNAG00000009990	si:dkey-37o8.1	96	37.900	ENSPNAG00000002605	gspt1l	74	37.900
ENSPNAG00000009990	si:dkey-37o8.1	100	72.511	ENSPNAG00000009890	eef1a1b	100	72.511
ENSPNAG00000009990	si:dkey-37o8.1	98	72.707	ENSPNAG00000026105	-	100	71.645

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000009990	si:dkey-37o8.1	100	83.406	ENSAPOG00000016459	si:dkey-37o8.1	100	83.406	Acanthochromis_polyacanthus
ENSPNAG00000009990	si:dkey-37o8.1	96	81.465	ENSACIG00000020985	si:dkey-37o8.1	82	81.465	Amphilophus_citrinellus
ENSPNAG00000009990	si:dkey-37o8.1	100	84.716	ENSAOCG00000002663	si:dkey-37o8.1	100	84.716	Amphiprion_ocellaris
ENSPNAG00000009990	si:dkey-37o8.1	100	84.716	ENSAPEG00000012670	si:dkey-37o8.1	100	84.716	Amphiprion_percula
ENSPNAG00000009990	si:dkey-37o8.1	93	84.360	ENSATEG00000002217	si:dkey-37o8.1	99	84.360	Anabas_testudineus
ENSPNAG00000009990	si:dkey-37o8.1	100	84.061	ENSACLG00000003519	si:dkey-37o8.1	100	84.061	Astatotilapia_calliptera
ENSPNAG00000009990	si:dkey-37o8.1	100	94.105	ENSAMXG00000002728	si:dkey-37o8.1	100	94.105	Astyanax_mexicanus
ENSPNAG00000009990	si:dkey-37o8.1	99	73.523	ENSCPBG00000020570	-	90	73.684	Chrysemys_picta_bellii
ENSPNAG00000009990	si:dkey-37o8.1	100	78.478	ENSCSEG00000019807	si:dkey-37o8.1	100	77.634	Cynoglossus_semilaevis
ENSPNAG00000009990	si:dkey-37o8.1	99	83.956	ENSCVAG00000009828	si:dkey-37o8.1	99	83.956	Cyprinodon_variegatus
ENSPNAG00000009990	si:dkey-37o8.1	100	87.336	ENSDARG00000071727	si:dkey-37o8.1	95	87.336	Danio_rerio
ENSPNAG00000009990	si:dkey-37o8.1	100	84.716	ENSELUG00000007495	si:dkey-37o8.1	100	84.716	Esox_lucius
ENSPNAG00000009990	si:dkey-37o8.1	100	83.188	ENSFHEG00000017452	si:dkey-37o8.1	100	83.188	Fundulus_heteroclitus
ENSPNAG00000009990	si:dkey-37o8.1	99	78.462	ENSGMOG00000006122	si:dkey-37o8.1	100	78.462	Gadus_morhua
ENSPNAG00000009990	si:dkey-37o8.1	97	78.555	ENSGAFG00000000367	si:dkey-37o8.1	98	78.555	Gambusia_affinis
ENSPNAG00000009990	si:dkey-37o8.1	100	80.131	ENSGACG00000004505	si:dkey-37o8.1	100	80.131	Gasterosteus_aculeatus
ENSPNAG00000009990	si:dkey-37o8.1	99	75.439	ENSGAGG00000007724	-	98	80.000	Gopherus_agassizii
ENSPNAG00000009990	si:dkey-37o8.1	100	84.279	ENSHBUG00000015515	si:dkey-37o8.1	100	84.279	Haplochromis_burtoni
ENSPNAG00000009990	si:dkey-37o8.1	97	76.524	ENSHCOG00000001215	si:dkey-37o8.1	98	76.524	Hippocampus_comes
ENSPNAG00000009990	si:dkey-37o8.1	100	92.140	ENSIPUG00000004067	si:dkey-37o8.1	100	92.140	Ictalurus_punctatus
ENSPNAG00000009990	si:dkey-37o8.1	100	82.751	ENSKMAG00000015910	si:dkey-37o8.1	100	82.751	Kryptolebias_marmoratus
ENSPNAG00000009990	si:dkey-37o8.1	100	84.061	ENSLBEG00000021334	si:dkey-37o8.1	89	85.235	Labrus_bergylta
ENSPNAG00000009990	si:dkey-37o8.1	97	79.458	ENSLACG00000003948	si:dkey-37o8.1	96	79.458	Latimeria_chalumnae
ENSPNAG00000009990	si:dkey-37o8.1	100	85.621	ENSLOCG00000011245	si:dkey-37o8.1	100	85.621	Lepisosteus_oculatus
ENSPNAG00000009990	si:dkey-37o8.1	97	73.589	ENSMAMG00000009907	si:dkey-37o8.1	93	73.589	Mastacembelus_armatus
ENSPNAG00000009990	si:dkey-37o8.1	100	84.061	ENSMZEG00005018358	si:dkey-37o8.1	100	84.061	Maylandia_zebra
ENSPNAG00000009990	si:dkey-37o8.1	97	84.199	ENSMMOG00000004111	si:dkey-37o8.1	98	83.019	Mola_mola
ENSPNAG00000009990	si:dkey-37o8.1	96	78.539	ENSMALG00000017152	si:dkey-37o8.1	99	78.539	Monopterus_albus
ENSPNAG00000009990	si:dkey-37o8.1	100	83.624	ENSNBRG00000013552	si:dkey-37o8.1	100	83.624	Neolamprologus_brichardi
ENSPNAG00000009990	si:dkey-37o8.1	100	83.406	ENSONIG00000006165	si:dkey-37o8.1	100	83.406	Oreochromis_niloticus
ENSPNAG00000009990	si:dkey-37o8.1	100	84.498	ENSORLG00000019066	si:dkey-37o8.1	100	84.498	Oryzias_latipes
ENSPNAG00000009990	si:dkey-37o8.1	100	84.498	ENSORLG00020008094	si:dkey-37o8.1	100	84.498	Oryzias_latipes_hni
ENSPNAG00000009990	si:dkey-37o8.1	100	84.716	ENSORLG00015008410	si:dkey-37o8.1	100	84.716	Oryzias_latipes_hsok
ENSPNAG00000009990	si:dkey-37o8.1	100	84.716	ENSOMEG00000001868	si:dkey-37o8.1	100	84.716	Oryzias_melastigma
ENSPNAG00000009990	si:dkey-37o8.1	100	85.526	ENSPKIG00000017246	si:dkey-37o8.1	100	85.403	Paramormyrops_kingsleyae
ENSPNAG00000009990	si:dkey-37o8.1	60	68.905	ENSPSIG00000008080	-	99	68.905	Pelodiscus_sinensis
ENSPNAG00000009990	si:dkey-37o8.1	100	83.843	ENSPFOG00000013173	si:dkey-37o8.1	100	83.843	Poecilia_formosa
ENSPNAG00000009990	si:dkey-37o8.1	100	82.533	ENSPLAG00000010405	si:dkey-37o8.1	100	82.533	Poecilia_latipinna
ENSPNAG00000009990	si:dkey-37o8.1	100	83.843	ENSPMEG00000015233	si:dkey-37o8.1	100	83.843	Poecilia_mexicana
ENSPNAG00000009990	si:dkey-37o8.1	99	83.077	ENSPREG00000006280	si:dkey-37o8.1	100	83.077	Poecilia_reticulata
ENSPNAG00000009990	si:dkey-37o8.1	100	83.624	ENSPNYG00000002059	si:dkey-37o8.1	100	83.624	Pundamilia_nyererei
ENSPNAG00000009990	si:dkey-37o8.1	97	86.230	ENSSFOG00015019070	si:dkey-37o8.1	98	85.843	Scleropages_formosus
ENSPNAG00000009990	si:dkey-37o8.1	100	83.843	ENSSMAG00000016143	si:dkey-37o8.1	100	83.843	Scophthalmus_maximus
ENSPNAG00000009990	si:dkey-37o8.1	100	84.061	ENSSDUG00000009163	si:dkey-37o8.1	100	84.061	Seriola_dumerili
ENSPNAG00000009990	si:dkey-37o8.1	100	84.279	ENSSLDG00000023761	si:dkey-37o8.1	100	84.279	Seriola_lalandi_dorsalis
ENSPNAG00000009990	si:dkey-37o8.1	97	73.529	ENSSPUG00000007467	-	96	73.804	Sphenodon_punctatus
ENSPNAG00000009990	si:dkey-37o8.1	100	84.279	ENSSPAG00000013856	si:dkey-37o8.1	100	84.279	Stegastes_partitus
ENSPNAG00000009990	si:dkey-37o8.1	96	85.000	ENSTRUG00000009006	si:dkey-37o8.1	98	85.000	Takifugu_rubripes
ENSPNAG00000009990	si:dkey-37o8.1	97	83.973	ENSTNIG00000017138	si:dkey-37o8.1	95	83.973	Tetraodon_nigroviridis
ENSPNAG00000009990	si:dkey-37o8.1	96	78.588	ENSXETG00000017744	42Sp50	99	77.024	Xenopus_tropicalis
ENSPNAG00000009990	si:dkey-37o8.1	99	83.516	ENSXCOG00000012296	si:dkey-37o8.1	100	83.516	Xiphophorus_couchianus
ENSPNAG00000009990	si:dkey-37o8.1	100	84.061	ENSXMAG00000001998	si:dkey-37o8.1	100	84.061	Xiphophorus_maculatus