EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000010099 (Gene tree)
Gene ID: 108435391
Gene Symbol: smarcad1b
Alias: si:dkey-76p7.6
Full Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1B-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 33290 bases
Position: chrKV575467.1:86372-119661
Accession: 108435391
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000003686	ResIII	PF04851.15	3.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000008299	-	3509	XM_017711207	ENSPNAP00000003686	930 (aa)	XP_017566696	UPI00081435C3

Gene Model

Click here to download ENSPNAG00000010099's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000010099's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000010099	smarcad1b	54	30.930	ENSPNAG00000000295	rad54b	58	30.476
ENSPNAG00000010099	smarcad1b	86	63.196	ENSPNAG00000001663	smarcad1a	84	63.075
ENSPNAG00000010099	smarcad1b	55	35.741	ENSPNAG00000029968	hells	65	35.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000010099	smarcad1b	84	59.623	ENSG00000163104	SMARCAD1	100	68.121	Homo_sapiens
ENSPNAG00000010099	smarcad1b	81	72.238	ENSAPOG00000011446	smarcad1a	73	72.344	Acanthochromis_polyacanthus
ENSPNAG00000010099	smarcad1b	84	60.126	ENSAMEG00000005844	SMARCAD1	80	57.770	Ailuropoda_melanoleuca
ENSPNAG00000010099	smarcad1b	75	78.719	ENSACIG00000018326	smarcad1a	94	71.599	Amphilophus_citrinellus
ENSPNAG00000010099	smarcad1b	81	72.238	ENSAOCG00000019762	smarcad1a	72	72.635	Amphiprion_ocellaris
ENSPNAG00000010099	smarcad1b	82	72.303	ENSAPEG00000003889	smarcad1a	72	72.489	Amphiprion_percula
ENSPNAG00000010099	smarcad1b	83	72.214	ENSATEG00000015608	smarcad1a	90	59.759	Anabas_testudineus
ENSPNAG00000010099	smarcad1b	89	57.497	ENSAPLG00000004630	SMARCAD1	86	58.186	Anas_platyrhynchos
ENSPNAG00000010099	smarcad1b	99	51.762	ENSACAG00000013554	SMARCAD1	95	51.714	Anolis_carolinensis
ENSPNAG00000010099	smarcad1b	84	59.799	ENSANAG00000020488	SMARCAD1	88	58.180	Aotus_nancymaae
ENSPNAG00000010099	smarcad1b	83	72.529	ENSACLG00000017063	smarcad1a	85	63.333	Astatotilapia_calliptera
ENSPNAG00000010099	smarcad1b	71	69.552	ENSAMXG00000015470	smarcad1a	92	69.474	Astyanax_mexicanus
ENSPNAG00000010099	smarcad1b	100	83.316	ENSAMXG00000019130	smarcad1b	100	84.171	Astyanax_mexicanus
ENSPNAG00000010099	smarcad1b	84	59.774	ENSBTAG00000017061	SMARCAD1	78	58.516	Bos_taurus
ENSPNAG00000010099	smarcad1b	69	40.860	WBGene00010845	M03C11.8	63	41.483	Caenorhabditis_elegans
ENSPNAG00000010099	smarcad1b	84	60.050	ENSCJAG00000006778	SMARCAD1	78	58.426	Callithrix_jacchus
ENSPNAG00000010099	smarcad1b	84	60.252	ENSCAFG00000010026	SMARCAD1	81	57.888	Canis_familiaris
ENSPNAG00000010099	smarcad1b	84	60.252	ENSCAFG00020003994	SMARCAD1	90	59.287	Canis_lupus_dingo
ENSPNAG00000010099	smarcad1b	84	59.925	ENSCHIG00000012905	SMARCAD1	80	57.651	Capra_hircus
ENSPNAG00000010099	smarcad1b	84	60.126	ENSTSYG00000002706	SMARCAD1	78	59.041	Carlito_syrichta
ENSPNAG00000010099	smarcad1b	82	52.727	ENSCAPG00000016744	SMARCAD1	84	51.584	Cavia_aperea
ENSPNAG00000010099	smarcad1b	99	52.419	ENSCPOG00000011398	SMARCAD1	77	59.063	Cavia_porcellus
ENSPNAG00000010099	smarcad1b	84	60.176	ENSCCAG00000022264	SMARCAD1	100	68.456	Cebus_capucinus
ENSPNAG00000010099	smarcad1b	84	59.748	ENSCATG00000035663	SMARCAD1	90	58.672	Cercocebus_atys
ENSPNAG00000010099	smarcad1b	84	59.748	ENSCSAG00000004186	SMARCAD1	95	58.672	Chlorocebus_sabaeus
ENSPNAG00000010099	smarcad1b	99	52.270	ENSCPBG00000013203	SMARCAD1	80	57.346	Chrysemys_picta_bellii
ENSPNAG00000010099	smarcad1b	69	50.531	ENSCING00000001688	-	97	50.926	Ciona_intestinalis
ENSPNAG00000010099	smarcad1b	99	52.414	ENSCANG00000003556	SMARCAD1	100	68.121	Colobus_angolensis_palliatus
ENSPNAG00000010099	smarcad1b	84	59.023	ENSCGRG00001015056	Smarcad1	78	58.108	Cricetulus_griseus_chok1gshd
ENSPNAG00000010099	smarcad1b	84	59.023	ENSCGRG00000014087	Smarcad1	78	58.108	Cricetulus_griseus_crigri
ENSPNAG00000010099	smarcad1b	81	68.605	ENSCSEG00000014419	-	80	68.605	Cynoglossus_semilaevis
ENSPNAG00000010099	smarcad1b	82	68.391	ENSCSEG00000017903	smarcad1a	75	68.750	Cynoglossus_semilaevis
ENSPNAG00000010099	smarcad1b	100	68.111	ENSDARG00000073721	smarcad1b	100	68.654	Danio_rerio
ENSPNAG00000010099	smarcad1b	84	61.911	ENSDARG00000014041	smarcad1a	85	61.198	Danio_rerio
ENSPNAG00000010099	smarcad1b	84	59.799	ENSDNOG00000000806	-	78	58.918	Dasypus_novemcinctus
ENSPNAG00000010099	smarcad1b	88	58.816	ENSDORG00000012331	Smarcad1	79	58.767	Dipodomys_ordii
ENSPNAG00000010099	smarcad1b	69	44.785	FBgn0032157	Etl1	77	44.785	Drosophila_melanogaster
ENSPNAG00000010099	smarcad1b	66	47.293	ENSEBUG00000003969	smarcad1a	93	47.739	Eptatretus_burgeri
ENSPNAG00000010099	smarcad1b	84	60.126	ENSEASG00005012382	SMARCAD1	80	57.770	Equus_asinus_asinus
ENSPNAG00000010099	smarcad1b	84	60.126	ENSECAG00000011562	SMARCAD1	80	57.770	Equus_caballus
ENSPNAG00000010099	smarcad1b	88	66.357	ENSELUG00000018535	smarcad1a	85	66.086	Esox_lucius
ENSPNAG00000010099	smarcad1b	98	65.591	ENSELUG00000019154	smarcad1b	93	64.051	Esox_lucius
ENSPNAG00000010099	smarcad1b	84	60.000	ENSFCAG00000003958	SMARCAD1	100	68.121	Felis_catus
ENSPNAG00000010099	smarcad1b	86	60.565	ENSFALG00000006089	SMARCAD1	78	59.853	Ficedula_albicollis
ENSPNAG00000010099	smarcad1b	84	60.076	ENSFDAG00000017027	SMARCAD1	78	58.498	Fukomys_damarensis
ENSPNAG00000010099	smarcad1b	89	71.407	ENSFHEG00000012778	smarcad1a	75	70.132	Fundulus_heteroclitus
ENSPNAG00000010099	smarcad1b	89	64.423	ENSGMOG00000018995	smarcad1a	93	64.423	Gadus_morhua
ENSPNAG00000010099	smarcad1b	85	57.716	ENSGALG00000037339	SMARCAD1	94	57.465	Gallus_gallus
ENSPNAG00000010099	smarcad1b	82	74.045	ENSGAFG00000013498	smarcad1a	71	74.045	Gambusia_affinis
ENSPNAG00000010099	smarcad1b	88	63.735	ENSGACG00000007327	smarcad1a	92	63.385	Gasterosteus_aculeatus
ENSPNAG00000010099	smarcad1b	99	51.518	ENSGAGG00000008582	SMARCAD1	80	57.023	Gopherus_agassizii
ENSPNAG00000010099	smarcad1b	84	59.748	ENSGGOG00000023001	SMARCAD1	78	58.180	Gorilla_gorilla
ENSPNAG00000010099	smarcad1b	83	73.043	ENSHBUG00000011042	smarcad1a	73	72.714	Haplochromis_burtoni
ENSPNAG00000010099	smarcad1b	84	60.453	ENSHGLG00000005070	SMARCAD1	77	58.621	Heterocephalus_glaber_female
ENSPNAG00000010099	smarcad1b	84	60.453	ENSHGLG00100006812	SMARCAD1	77	58.621	Heterocephalus_glaber_male
ENSPNAG00000010099	smarcad1b	79	71.115	ENSHCOG00000007848	smarcad1a	73	67.103	Hippocampus_comes
ENSPNAG00000010099	smarcad1b	100	78.118	ENSIPUG00000022817	smarcad1b	100	77.966	Ictalurus_punctatus
ENSPNAG00000010099	smarcad1b	77	70.579	ENSIPUG00000000242	smarcad1a	89	58.094	Ictalurus_punctatus
ENSPNAG00000010099	smarcad1b	84	59.673	ENSSTOG00000001227	SMARCAD1	78	58.231	Ictidomys_tridecemlineatus
ENSPNAG00000010099	smarcad1b	84	59.521	ENSJJAG00000022342	Smarcad1	79	57.990	Jaculus_jaculus
ENSPNAG00000010099	smarcad1b	77	71.799	ENSKMAG00000021351	smarcad1a	72	70.134	Kryptolebias_marmoratus
ENSPNAG00000010099	smarcad1b	86	71.866	ENSLBEG00000008088	smarcad1a	76	71.387	Labrus_bergylta
ENSPNAG00000010099	smarcad1b	87	65.153	ENSLOCG00000012909	smarcad1a	84	63.452	Lepisosteus_oculatus
ENSPNAG00000010099	smarcad1b	99	51.360	ENSLAFG00000000040	SMARCAD1	78	57.073	Loxodonta_africana
ENSPNAG00000010099	smarcad1b	84	59.623	ENSMFAG00000042606	SMARCAD1	90	58.549	Macaca_fascicularis
ENSPNAG00000010099	smarcad1b	84	59.623	ENSMMUG00000022242	SMARCAD1	90	58.549	Macaca_mulatta
ENSPNAG00000010099	smarcad1b	84	59.623	ENSMNEG00000038117	SMARCAD1	100	68.121	Macaca_nemestrina
ENSPNAG00000010099	smarcad1b	84	59.748	ENSMLEG00000038333	SMARCAD1	100	68.121	Mandrillus_leucophaeus
ENSPNAG00000010099	smarcad1b	83	69.958	ENSMAMG00000000933	smarcad1a	83	63.158	Mastacembelus_armatus
ENSPNAG00000010099	smarcad1b	88	63.261	ENSMZEG00005005203	smarcad1a	85	63.333	Maylandia_zebra
ENSPNAG00000010099	smarcad1b	85	56.312	ENSMGAG00000005577	SMARCAD1	81	56.312	Meleagris_gallopavo
ENSPNAG00000010099	smarcad1b	84	59.371	ENSMAUG00000008417	Smarcad1	78	58.446	Mesocricetus_auratus
ENSPNAG00000010099	smarcad1b	84	59.774	ENSMICG00000009746	SMARCAD1	78	58.323	Microcebus_murinus
ENSPNAG00000010099	smarcad1b	84	59.824	ENSMOCG00000017142	Smarcad1	78	58.693	Microtus_ochrogaster
ENSPNAG00000010099	smarcad1b	85	64.838	ENSMMOG00000000275	smarcad1a	93	71.982	Mola_mola
ENSPNAG00000010099	smarcad1b	99	52.995	ENSMODG00000019268	SMARCAD1	78	59.309	Monodelphis_domestica
ENSPNAG00000010099	smarcad1b	86	58.374	MGP_CAROLIEiJ_G0028458	-	64	58.200	Mus_caroli
ENSPNAG00000010099	smarcad1b	84	58.772	ENSMUSG00000029920	Smarcad1	76	59.142	Mus_musculus
ENSPNAG00000010099	smarcad1b	86	57.966	MGP_PahariEiJ_G0022198	Smarcad1	78	58.323	Mus_pahari
ENSPNAG00000010099	smarcad1b	84	58.772	MGP_SPRETEiJ_G0029462	Smarcad1	76	59.142	Mus_spretus
ENSPNAG00000010099	smarcad1b	84	60.126	ENSMPUG00000002111	SMARCAD1	80	57.770	Mustela_putorius_furo
ENSPNAG00000010099	smarcad1b	84	60.000	ENSMLUG00000000425	SMARCAD1	78	58.918	Myotis_lucifugus
ENSPNAG00000010099	smarcad1b	84	59.521	ENSNGAG00000000810	Smarcad1	79	58.057	Nannospalax_galili
ENSPNAG00000010099	smarcad1b	71	72.864	ENSNBRG00000012749	smarcad1a	87	68.320	Neolamprologus_brichardi
ENSPNAG00000010099	smarcad1b	84	59.748	ENSNLEG00000014225	SMARCAD1	100	68.121	Nomascus_leucogenys
ENSPNAG00000010099	smarcad1b	84	60.277	ENSODEG00000004334	SMARCAD1	78	58.621	Octodon_degus
ENSPNAG00000010099	smarcad1b	86	59.632	ENSOANG00000013764	SMARCAD1	97	59.632	Ornithorhynchus_anatinus
ENSPNAG00000010099	smarcad1b	84	59.824	ENSOCUG00000017283	SMARCAD1	78	58.744	Oryctolagus_cuniculus
ENSPNAG00000010099	smarcad1b	70	73.313	ENSORLG00000004869	smarcad1a	65	70.262	Oryzias_latipes
ENSPNAG00000010099	smarcad1b	70	73.620	ENSORLG00020020569	smarcad1a	65	70.554	Oryzias_latipes_hni
ENSPNAG00000010099	smarcad1b	70	73.620	ENSORLG00015009045	smarcad1a	64	71.875	Oryzias_latipes_hsok
ENSPNAG00000010099	smarcad1b	83	73.773	ENSOMEG00000023032	smarcad1a	80	68.531	Oryzias_melastigma
ENSPNAG00000010099	smarcad1b	84	59.398	ENSOGAG00000011444	SMARCAD1	78	58.405	Otolemur_garnettii
ENSPNAG00000010099	smarcad1b	84	59.925	ENSOARG00000017851	SMARCAD1	80	57.651	Ovis_aries
ENSPNAG00000010099	smarcad1b	84	59.748	ENSPPAG00000035715	SMARCAD1	78	58.180	Pan_paniscus
ENSPNAG00000010099	smarcad1b	84	60.000	ENSPPRG00000024756	SMARCAD1	100	68.121	Panthera_pardus
ENSPNAG00000010099	smarcad1b	84	59.975	ENSPTIG00000017868	SMARCAD1	78	59.018	Panthera_tigris_altaica
ENSPNAG00000010099	smarcad1b	84	59.748	ENSPTRG00000023126	SMARCAD1	100	68.121	Pan_troglodytes
ENSPNAG00000010099	smarcad1b	99	49.299	ENSPANG00000019757	SMARCAD1	78	57.108	Papio_anubis
ENSPNAG00000010099	smarcad1b	99	52.515	ENSPSIG00000010255	SMARCAD1	94	52.515	Pelodiscus_sinensis
ENSPNAG00000010099	smarcad1b	68	69.640	ENSPMGG00000010735	smarcad1a	91	69.640	Periophthalmus_magnuspinnatus
ENSPNAG00000010099	smarcad1b	84	52.207	ENSPEMG00000001854	Smarcad1	77	51.960	Peromyscus_maniculatus_bairdii
ENSPNAG00000010099	smarcad1b	87	50.716	ENSPMAG00000003516	smarcad1a	80	51.456	Petromyzon_marinus
ENSPNAG00000010099	smarcad1b	85	60.000	ENSPCIG00000008137	SMARCAD1	98	60.459	Phascolarctos_cinereus
ENSPNAG00000010099	smarcad1b	90	70.494	ENSPFOG00000019116	smarcad1a	74	70.349	Poecilia_formosa
ENSPNAG00000010099	smarcad1b	90	70.349	ENSPLAG00000000108	smarcad1a	74	70.203	Poecilia_latipinna
ENSPNAG00000010099	smarcad1b	90	70.494	ENSPMEG00000009155	smarcad1a	74	70.349	Poecilia_mexicana
ENSPNAG00000010099	smarcad1b	91	70.349	ENSPREG00000018185	smarcad1a	81	70.554	Poecilia_reticulata
ENSPNAG00000010099	smarcad1b	84	59.473	ENSPPYG00000014935	SMARCAD1	78	57.914	Pongo_abelii
ENSPNAG00000010099	smarcad1b	74	54.000	ENSPCOG00000020478	SMARCAD1	71	56.786	Propithecus_coquereli
ENSPNAG00000010099	smarcad1b	84	59.874	ENSPVAG00000001760	SMARCAD1	77	58.940	Pteropus_vampyrus
ENSPNAG00000010099	smarcad1b	71	72.496	ENSPNYG00000010087	smarcad1a	80	72.156	Pundamilia_nyererei
ENSPNAG00000010099	smarcad1b	86	58.765	ENSRNOG00000006391	Smarcad1	77	58.591	Rattus_norvegicus
ENSPNAG00000010099	smarcad1b	84	59.748	ENSRBIG00000041989	SMARCAD1	78	58.180	Rhinopithecus_bieti
ENSPNAG00000010099	smarcad1b	84	59.748	ENSRROG00000035309	SMARCAD1	78	58.180	Rhinopithecus_roxellana
ENSPNAG00000010099	smarcad1b	99	52.663	ENSSBOG00000032114	SMARCAD1	100	68.456	Saimiri_boliviensis_boliviensis
ENSPNAG00000010099	smarcad1b	99	53.721	ENSSHAG00000001279	SMARCAD1	78	59.559	Sarcophilus_harrisii
ENSPNAG00000010099	smarcad1b	98	62.921	ENSSFOG00015016814	smarcad1b	96	62.755	Scleropages_formosus
ENSPNAG00000010099	smarcad1b	83	62.770	ENSSFOG00015020909	smarcad1a	100	62.262	Scleropages_formosus
ENSPNAG00000010099	smarcad1b	89	71.594	ENSSMAG00000001326	smarcad1a	77	70.845	Scophthalmus_maximus
ENSPNAG00000010099	smarcad1b	73	72.635	ENSSDUG00000022338	smarcad1a	82	71.866	Seriola_dumerili
ENSPNAG00000010099	smarcad1b	73	70.845	ENSSLDG00000024986	smarcad1a	64	70.845	Seriola_lalandi_dorsalis
ENSPNAG00000010099	smarcad1b	63	68.571	ENSSPUG00000004633	SMARCAD1	99	68.571	Sphenodon_punctatus
ENSPNAG00000010099	smarcad1b	81	72.859	ENSSPAG00000001970	smarcad1a	72	72.926	Stegastes_partitus
ENSPNAG00000010099	smarcad1b	84	60.252	ENSSSCG00000009193	SMARCAD1	98	57.888	Sus_scrofa
ENSPNAG00000010099	smarcad1b	84	59.352	ENSTGUG00000003127	SMARCAD1	100	59.776	Taeniopygia_guttata
ENSPNAG00000010099	smarcad1b	86	66.790	ENSTNIG00000017585	smarcad1a	93	65.380	Tetraodon_nigroviridis
ENSPNAG00000010099	smarcad1b	74	71.429	ENSTBEG00000002789	SMARCAD1	59	71.429	Tupaia_belangeri
ENSPNAG00000010099	smarcad1b	84	59.925	ENSTTRG00000000226	SMARCAD1	80	58.587	Tursiops_truncatus
ENSPNAG00000010099	smarcad1b	84	60.000	ENSUAMG00000022262	SMARCAD1	79	60.292	Ursus_americanus
ENSPNAG00000010099	smarcad1b	84	60.000	ENSUMAG00000004549	SMARCAD1	78	59.041	Ursus_maritimus
ENSPNAG00000010099	smarcad1b	84	60.000	ENSVVUG00000007271	SMARCAD1	98	57.651	Vulpes_vulpes
ENSPNAG00000010099	smarcad1b	83	55.457	ENSXETG00000019214	smarcad1	89	55.429	Xenopus_tropicalis
ENSPNAG00000010099	smarcad1b	83	65.296	ENSXCOG00000005232	smarcad1a	87	66.761	Xiphophorus_couchianus
ENSPNAG00000010099	smarcad1b	91	70.290	ENSXMAG00000015350	smarcad1a	79	69.811	Xiphophorus_maculatus