EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000010399 (Gene tree)
Gene ID: 108440208
Gene Symbol: prpf38a
Alias: fa04h11|fc83e08|wu:fa04h11|wu:fc83e08|zgc:92059
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 5385 bases
Position: chrKV575295.1:4977710-4983094
Accession: 108440208
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000025369	PRP38	PF03371.15	6.3e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000007799	-	1420	XM_017718977	ENSPNAP00000025369	313 (aa)	XP_017574466	UPI0008148F0D

Gene Model

Click here to download ENSPNAG00000010399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000010399's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000010399	prpf38a	100	82.428	ENSG00000134748	PRPF38A	100	82.428	Homo_sapiens
ENSPNAG00000010399	prpf38a	100	93.291	ENSAPOG00000011652	prpf38a	100	84.984	Acanthochromis_polyacanthus
ENSPNAG00000010399	prpf38a	100	82.428	ENSAMEG00000009319	PRPF38A	100	82.428	Ailuropoda_melanoleuca
ENSPNAG00000010399	prpf38a	72	91.593	ENSACIG00000012292	prpf38a	74	91.593	Amphilophus_citrinellus
ENSPNAG00000010399	prpf38a	100	93.291	ENSAOCG00000018004	prpf38a	100	84.984	Amphiprion_ocellaris
ENSPNAG00000010399	prpf38a	100	93.291	ENSAPEG00000021414	prpf38a	100	84.984	Amphiprion_percula
ENSPNAG00000010399	prpf38a	71	92.308	ENSATEG00000004608	prpf38a	100	83.387	Anabas_testudineus
ENSPNAG00000010399	prpf38a	79	78.226	ENSAPLG00000005827	PRPF38A	99	78.226	Anas_platyrhynchos
ENSPNAG00000010399	prpf38a	100	81.789	ENSACAG00000008249	PRPF38A	100	81.789	Anolis_carolinensis
ENSPNAG00000010399	prpf38a	100	55.521	ENSANAG00000029204	-	100	55.836	Aotus_nancymaae
ENSPNAG00000010399	prpf38a	100	82.428	ENSANAG00000027839	PRPF38A	100	82.428	Aotus_nancymaae
ENSPNAG00000010399	prpf38a	71	93.213	ENSACLG00000021595	prpf38a	100	84.345	Astatotilapia_calliptera
ENSPNAG00000010399	prpf38a	100	97.764	ENSAMXG00000029274	prpf38a	100	97.764	Astyanax_mexicanus
ENSPNAG00000010399	prpf38a	100	82.428	ENSBTAG00000002720	PRPF38A	100	82.428	Bos_taurus
ENSPNAG00000010399	prpf38a	62	63.590	WBGene00008380	prp-38	68	60.274	Caenorhabditis_elegans
ENSPNAG00000010399	prpf38a	100	82.428	ENSCJAG00000021594	PRPF38A	100	82.428	Callithrix_jacchus
ENSPNAG00000010399	prpf38a	100	82.428	ENSCAFG00000003740	PRPF38A	100	82.428	Canis_familiaris
ENSPNAG00000010399	prpf38a	100	82.428	ENSCAFG00020010939	PRPF38A	100	82.428	Canis_lupus_dingo
ENSPNAG00000010399	prpf38a	100	82.428	ENSCHIG00000024730	PRPF38A	100	82.428	Capra_hircus
ENSPNAG00000010399	prpf38a	100	82.428	ENSTSYG00000009868	-	100	82.428	Carlito_syrichta
ENSPNAG00000010399	prpf38a	86	78.889	ENSTSYG00000031994	-	95	78.889	Carlito_syrichta
ENSPNAG00000010399	prpf38a	100	82.428	ENSCPOG00000005079	PRPF38A	100	82.428	Cavia_porcellus
ENSPNAG00000010399	prpf38a	100	81.470	ENSCCAG00000026502	PRPF38A	100	81.470	Cebus_capucinus
ENSPNAG00000010399	prpf38a	100	82.428	ENSCATG00000032296	PRPF38A	100	82.428	Cercocebus_atys
ENSPNAG00000010399	prpf38a	93	53.242	ENSCATG00000044190	-	57	55.851	Cercocebus_atys
ENSPNAG00000010399	prpf38a	100	82.428	ENSCLAG00000005816	PRPF38A	100	82.428	Chinchilla_lanigera
ENSPNAG00000010399	prpf38a	78	94.792	ENSCHOG00000008388	PRPF38A	77	94.792	Choloepus_hoffmanni
ENSPNAG00000010399	prpf38a	100	81.789	ENSCPBG00000014791	PRPF38A	100	81.789	Chrysemys_picta_bellii
ENSPNAG00000010399	prpf38a	74	71.429	ENSCSAVG00000009580	-	71	73.733	Ciona_savignyi
ENSPNAG00000010399	prpf38a	74	87.879	ENSCANG00000032608	PRPF38A	74	88.688	Colobus_angolensis_palliatus
ENSPNAG00000010399	prpf38a	74	74.026	ENSCGRG00001002557	-	74	75.113	Cricetulus_griseus_chok1gshd
ENSPNAG00000010399	prpf38a	100	82.428	ENSCGRG00001018502	-	100	82.428	Cricetulus_griseus_chok1gshd
ENSPNAG00000010399	prpf38a	100	82.428	ENSCGRG00000014868	Prpf38a	100	82.428	Cricetulus_griseus_crigri
ENSPNAG00000010399	prpf38a	72	92.035	ENSCSEG00000001269	prpf38a	77	92.035	Cynoglossus_semilaevis
ENSPNAG00000010399	prpf38a	71	93.665	ENSCVAG00000012305	prpf38a	100	84.026	Cyprinodon_variegatus
ENSPNAG00000010399	prpf38a	100	94.249	ENSDARG00000039213	prpf38a	100	94.249	Danio_rerio
ENSPNAG00000010399	prpf38a	100	82.428	ENSDNOG00000042326	PRPF38A	100	82.428	Dasypus_novemcinctus
ENSPNAG00000010399	prpf38a	92	71.379	ENSDORG00000023691	-	76	81.364	Dipodomys_ordii
ENSPNAG00000010399	prpf38a	92	71.379	ENSDORG00000025371	-	76	81.364	Dipodomys_ordii
ENSPNAG00000010399	prpf38a	100	70.607	ENSDORG00000023857	-	100	96.875	Dipodomys_ordii
ENSPNAG00000010399	prpf38a	67	69.668	FBgn0050342	Prp38	57	74.468	Drosophila_melanogaster
ENSPNAG00000010399	prpf38a	76	81.172	ENSEBUG00000012588	prpf38a	71	80.717	Eptatretus_burgeri
ENSPNAG00000010399	prpf38a	100	82.428	ENSEASG00005014427	PRPF38A	100	82.428	Equus_asinus_asinus
ENSPNAG00000010399	prpf38a	100	82.428	ENSECAG00000022628	PRPF38A	100	82.428	Equus_caballus
ENSPNAG00000010399	prpf38a	71	93.665	ENSELUG00000021094	prpf38a	100	84.026	Esox_lucius
ENSPNAG00000010399	prpf38a	100	82.428	ENSFCAG00000002518	PRPF38A	100	82.428	Felis_catus
ENSPNAG00000010399	prpf38a	87	79.779	ENSFALG00000005598	-	100	79.779	Ficedula_albicollis
ENSPNAG00000010399	prpf38a	99	73.567	ENSFALG00000003612	-	73	82.727	Ficedula_albicollis
ENSPNAG00000010399	prpf38a	100	82.109	ENSFDAG00000011287	PRPF38A	100	82.109	Fukomys_damarensis
ENSPNAG00000010399	prpf38a	69	94.009	ENSFHEG00000014317	prpf38a	75	93.665	Fundulus_heteroclitus
ENSPNAG00000010399	prpf38a	53	95.783	ENSGMOG00000011384	prpf38a	54	95.783	Gadus_morhua
ENSPNAG00000010399	prpf38a	100	82.748	ENSGALG00000010627	PRPF38A	100	82.748	Gallus_gallus
ENSPNAG00000010399	prpf38a	71	92.760	ENSGAFG00000012422	prpf38a	100	83.067	Gambusia_affinis
ENSPNAG00000010399	prpf38a	71	91.480	ENSGACG00000005423	prpf38a	100	82.540	Gasterosteus_aculeatus
ENSPNAG00000010399	prpf38a	100	82.109	ENSGAGG00000020547	PRPF38A	100	82.109	Gopherus_agassizii
ENSPNAG00000010399	prpf38a	100	82.428	ENSGGOG00000003940	PRPF38A	100	82.428	Gorilla_gorilla
ENSPNAG00000010399	prpf38a	60	95.238	ENSHBUG00000020572	prpf38a	80	95.213	Haplochromis_burtoni
ENSPNAG00000010399	prpf38a	100	82.428	ENSHGLG00000000475	PRPF38A	100	82.428	Heterocephalus_glaber_female
ENSPNAG00000010399	prpf38a	100	71.746	ENSHGLG00000007918	-	71	76.471	Heterocephalus_glaber_female
ENSPNAG00000010399	prpf38a	100	82.428	ENSHGLG00100008935	PRPF38A	100	82.428	Heterocephalus_glaber_male
ENSPNAG00000010399	prpf38a	100	71.746	ENSHGLG00100003928	-	71	76.471	Heterocephalus_glaber_male
ENSPNAG00000010399	prpf38a	65	87.019	ENSHCOG00000020781	prpf38a	59	92.553	Hippocampus_comes
ENSPNAG00000010399	prpf38a	90	81.979	ENSIPUG00000005757	prpf38a	100	93.248	Ictalurus_punctatus
ENSPNAG00000010399	prpf38a	100	82.428	ENSSTOG00000015610	PRPF38A	100	82.428	Ictidomys_tridecemlineatus
ENSPNAG00000010399	prpf38a	100	81.789	ENSJJAG00000015811	Prpf38a	100	81.789	Jaculus_jaculus
ENSPNAG00000010399	prpf38a	71	93.665	ENSKMAG00000006588	prpf38a	100	84.026	Kryptolebias_marmoratus
ENSPNAG00000010399	prpf38a	100	84.984	ENSLBEG00000020585	prpf38a	100	83.067	Labrus_bergylta
ENSPNAG00000010399	prpf38a	100	82.748	ENSLACG00000011495	PRPF38A	100	82.748	Latimeria_chalumnae
ENSPNAG00000010399	prpf38a	100	84.713	ENSLOCG00000006262	prpf38a	100	83.121	Lepisosteus_oculatus
ENSPNAG00000010399	prpf38a	100	82.428	ENSLAFG00000025862	PRPF38A	100	82.428	Loxodonta_africana
ENSPNAG00000010399	prpf38a	100	82.428	ENSMFAG00000039449	PRPF38A	100	82.428	Macaca_fascicularis
ENSPNAG00000010399	prpf38a	87	79.779	ENSMMUG00000014333	PRPF38A	98	79.487	Macaca_mulatta
ENSPNAG00000010399	prpf38a	100	82.428	ENSMNEG00000031221	PRPF38A	100	82.428	Macaca_nemestrina
ENSPNAG00000010399	prpf38a	93	52.901	ENSMNEG00000040242	-	65	57.971	Macaca_nemestrina
ENSPNAG00000010399	prpf38a	100	82.428	ENSMLEG00000041105	PRPF38A	100	82.428	Mandrillus_leucophaeus
ENSPNAG00000010399	prpf38a	71	93.665	ENSMAMG00000015431	prpf38a	100	84.665	Mastacembelus_armatus
ENSPNAG00000010399	prpf38a	71	93.213	ENSMZEG00005017838	prpf38a	100	84.026	Maylandia_zebra
ENSPNAG00000010399	prpf38a	74	88.312	ENSMGAG00000011176	PRPF38A	74	89.140	Meleagris_gallopavo
ENSPNAG00000010399	prpf38a	85	82.090	ENSMAUG00000018029	-	84	84.163	Mesocricetus_auratus
ENSPNAG00000010399	prpf38a	100	82.428	ENSMICG00000014193	PRPF38A	100	82.428	Microcebus_murinus
ENSPNAG00000010399	prpf38a	100	82.428	ENSMOCG00000013080	Prpf38a	100	82.428	Microtus_ochrogaster
ENSPNAG00000010399	prpf38a	81	88.627	ENSMMOG00000016972	prpf38a	78	94.118	Mola_mola
ENSPNAG00000010399	prpf38a	100	79.936	ENSMODG00000000644	PRPF38A	100	79.936	Monodelphis_domestica
ENSPNAG00000010399	prpf38a	71	94.570	ENSMALG00000019363	prpf38a	97	84.984	Monopterus_albus
ENSPNAG00000010399	prpf38a	100	82.109	MGP_CAROLIEiJ_G0026269	Prpf38a	100	82.109	Mus_caroli
ENSPNAG00000010399	prpf38a	100	82.109	ENSMUSG00000063800	Prpf38a	100	82.109	Mus_musculus
ENSPNAG00000010399	prpf38a	100	82.109	MGP_PahariEiJ_G0028602	Prpf38a	100	82.109	Mus_pahari
ENSPNAG00000010399	prpf38a	100	82.428	MGP_SPRETEiJ_G0027238	Prpf38a	93	92.021	Mus_spretus
ENSPNAG00000010399	prpf38a	100	82.428	ENSMPUG00000006896	PRPF38A	100	82.428	Mustela_putorius_furo
ENSPNAG00000010399	prpf38a	100	82.428	ENSNGAG00000011884	Prpf38a	100	82.428	Nannospalax_galili
ENSPNAG00000010399	prpf38a	72	92.035	ENSNBRG00000004013	prpf38a	73	92.035	Neolamprologus_brichardi
ENSPNAG00000010399	prpf38a	97	61.639	ENSNLEG00000012592	-	99	58.086	Nomascus_leucogenys
ENSPNAG00000010399	prpf38a	93	53.925	ENSNLEG00000033398	-	94	53.035	Nomascus_leucogenys
ENSPNAG00000010399	prpf38a	93	81.379	ENSNLEG00000017999	PRPF38A	93	81.379	Nomascus_leucogenys
ENSPNAG00000010399	prpf38a	100	79.553	ENSMEUG00000003860	PRPF38A	100	79.553	Notamacropus_eugenii
ENSPNAG00000010399	prpf38a	73	88.158	ENSOPRG00000008985	PRPF38A	92	88.688	Ochotona_princeps
ENSPNAG00000010399	prpf38a	100	82.428	ENSODEG00000005869	PRPF38A	100	82.428	Octodon_degus
ENSPNAG00000010399	prpf38a	71	91.855	ENSONIG00000007816	prpf38a	100	83.067	Oreochromis_niloticus
ENSPNAG00000010399	prpf38a	100	50.794	ENSOANG00000009541	-	100	50.794	Ornithorhynchus_anatinus
ENSPNAG00000010399	prpf38a	100	82.428	ENSOCUG00000000963	PRPF38A	100	82.428	Oryctolagus_cuniculus
ENSPNAG00000010399	prpf38a	99	85.577	ENSORLG00000013485	prpf38a	99	83.654	Oryzias_latipes
ENSPNAG00000010399	prpf38a	99	85.577	ENSORLG00020002130	prpf38a	99	83.654	Oryzias_latipes_hni
ENSPNAG00000010399	prpf38a	99	85.256	ENSORLG00015021393	prpf38a	99	83.333	Oryzias_latipes_hsok
ENSPNAG00000010399	prpf38a	100	84.984	ENSOMEG00000016333	prpf38a	100	83.067	Oryzias_melastigma
ENSPNAG00000010399	prpf38a	100	82.428	ENSOGAG00000005423	PRPF38A	100	82.428	Otolemur_garnettii
ENSPNAG00000010399	prpf38a	100	82.428	ENSOARG00000005373	PRPF38A	100	82.428	Ovis_aries
ENSPNAG00000010399	prpf38a	100	82.428	ENSPPAG00000030905	PRPF38A	100	82.428	Pan_paniscus
ENSPNAG00000010399	prpf38a	93	67.797	ENSPPAG00000033867	-	100	65.176	Pan_paniscus
ENSPNAG00000010399	prpf38a	100	82.428	ENSPPRG00000013268	PRPF38A	100	82.428	Panthera_pardus
ENSPNAG00000010399	prpf38a	100	82.428	ENSPTIG00000015419	PRPF38A	100	82.428	Panthera_tigris_altaica
ENSPNAG00000010399	prpf38a	100	82.428	ENSPTRG00000000739	PRPF38A	100	82.428	Pan_troglodytes
ENSPNAG00000010399	prpf38a	100	82.428	ENSPANG00000015483	PRPF38A	100	82.428	Papio_anubis
ENSPNAG00000010399	prpf38a	100	85.623	ENSPKIG00000011439	prpf38a	100	83.706	Paramormyrops_kingsleyae
ENSPNAG00000010399	prpf38a	100	81.470	ENSPSIG00000017487	PRPF38A	100	81.470	Pelodiscus_sinensis
ENSPNAG00000010399	prpf38a	78	81.967	ENSPMGG00000021352	prpf38a	78	89.381	Periophthalmus_magnuspinnatus
ENSPNAG00000010399	prpf38a	100	82.428	ENSPEMG00000023277	-	100	82.428	Peromyscus_maniculatus_bairdii
ENSPNAG00000010399	prpf38a	100	77.287	ENSPEMG00000011212	-	100	76.508	Peromyscus_maniculatus_bairdii
ENSPNAG00000010399	prpf38a	100	79.618	ENSPCIG00000022369	-	100	79.618	Phascolarctos_cinereus
ENSPNAG00000010399	prpf38a	100	83.861	ENSPFOG00000004248	prpf38a	100	83.067	Poecilia_formosa
ENSPNAG00000010399	prpf38a	96	77.705	ENSPLAG00000010328	prpf38a	100	83.067	Poecilia_latipinna
ENSPNAG00000010399	prpf38a	92	80.412	ENSPMEG00000011804	prpf38a	100	83.067	Poecilia_mexicana
ENSPNAG00000010399	prpf38a	95	79.667	ENSPREG00000002835	prpf38a	58	95.213	Poecilia_reticulata
ENSPNAG00000010399	prpf38a	100	74.528	ENSPPYG00000001348	PRPF38A	100	74.528	Pongo_abelii
ENSPNAG00000010399	prpf38a	100	82.748	ENSPCAG00000013328	PRPF38A	100	82.748	Procavia_capensis
ENSPNAG00000010399	prpf38a	100	66.134	ENSPCOG00000020709	-	73	72.398	Propithecus_coquereli
ENSPNAG00000010399	prpf38a	100	82.428	ENSPCOG00000016387	-	100	82.428	Propithecus_coquereli
ENSPNAG00000010399	prpf38a	100	82.428	ENSPVAG00000009803	PRPF38A	100	82.428	Pteropus_vampyrus
ENSPNAG00000010399	prpf38a	71	93.213	ENSPNYG00000005571	prpf38a	100	84.026	Pundamilia_nyererei
ENSPNAG00000010399	prpf38a	100	82.748	ENSRNOG00000009451	Prpf38a	100	82.748	Rattus_norvegicus
ENSPNAG00000010399	prpf38a	100	82.428	ENSRBIG00000036442	PRPF38A	100	82.428	Rhinopithecus_bieti
ENSPNAG00000010399	prpf38a	100	52.830	ENSRROG00000034606	-	65	75.410	Rhinopithecus_roxellana
ENSPNAG00000010399	prpf38a	100	82.428	ENSRROG00000032788	PRPF38A	100	82.428	Rhinopithecus_roxellana
ENSPNAG00000010399	prpf38a	98	68.932	ENSRROG00000040003	-	72	71.946	Rhinopithecus_roxellana
ENSPNAG00000010399	prpf38a	100	82.428	ENSSBOG00000019515	PRPF38A	100	82.428	Saimiri_boliviensis_boliviensis
ENSPNAG00000010399	prpf38a	77	72.917	ENSSHAG00000006029	-	74	76.018	Sarcophilus_harrisii
ENSPNAG00000010399	prpf38a	87	76.838	ENSSHAG00000006906	-	100	76.838	Sarcophilus_harrisii
ENSPNAG00000010399	prpf38a	100	85.669	ENSSFOG00015013572	prpf38a	100	81.847	Scleropages_formosus
ENSPNAG00000010399	prpf38a	71	93.213	ENSSMAG00000015379	prpf38a	72	93.213	Scophthalmus_maximus
ENSPNAG00000010399	prpf38a	71	94.570	ENSSDUG00000001324	prpf38a	100	85.304	Seriola_dumerili
ENSPNAG00000010399	prpf38a	71	94.570	ENSSLDG00000014803	prpf38a	100	85.304	Seriola_lalandi_dorsalis
ENSPNAG00000010399	prpf38a	100	65.815	ENSSARG00000014458	PRPF38A	100	65.815	Sorex_araneus
ENSPNAG00000010399	prpf38a	100	81.789	ENSSPUG00000013259	PRPF38A	100	81.789	Sphenodon_punctatus
ENSPNAG00000010399	prpf38a	71	76.018	ENSSPAG00000010449	prpf38a	70	76.549	Stegastes_partitus
ENSPNAG00000010399	prpf38a	100	82.428	ENSSSCG00000028288	PRPF38A	100	82.428	Sus_scrofa
ENSPNAG00000010399	prpf38a	100	78.594	ENSTGUG00000008995	PRPF38A	100	78.594	Taeniopygia_guttata
ENSPNAG00000010399	prpf38a	71	92.760	ENSTRUG00000003374	prpf38a	68	92.760	Takifugu_rubripes
ENSPNAG00000010399	prpf38a	71	91.031	ENSTNIG00000005533	prpf38a	100	82.540	Tetraodon_nigroviridis
ENSPNAG00000010399	prpf38a	100	81.789	ENSTBEG00000000725	PRPF38A	100	81.789	Tupaia_belangeri
ENSPNAG00000010399	prpf38a	100	82.428	ENSTTRG00000016139	PRPF38A	100	82.428	Tursiops_truncatus
ENSPNAG00000010399	prpf38a	100	82.428	ENSUAMG00000000625	PRPF38A	100	82.428	Ursus_americanus
ENSPNAG00000010399	prpf38a	100	82.428	ENSUMAG00000022674	PRPF38A	100	82.428	Ursus_maritimus
ENSPNAG00000010399	prpf38a	74	88.312	ENSVPAG00000000907	PRPF38A	71	89.140	Vicugna_pacos
ENSPNAG00000010399	prpf38a	100	82.428	ENSVVUG00000004475	PRPF38A	100	82.428	Vulpes_vulpes
ENSPNAG00000010399	prpf38a	100	81.529	ENSXETG00000008060	prpf38a	100	79.936	Xenopus_tropicalis
ENSPNAG00000010399	prpf38a	72	90.789	ENSXCOG00000007393	prpf38a	75	90.789	Xiphophorus_couchianus
ENSPNAG00000010399	prpf38a	71	92.760	ENSXMAG00000026143	prpf38a	100	83.067	Xiphophorus_maculatus