EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000010547 (Gene tree)
Gene ID: 108440306
Gene Symbol: snrpd3
Alias: zgc:86943
Full Name: small nuclear ribonucleoprotein D3 polypeptide
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 6387 bases
Position: chrKV575632.1:381158-387544
Accession: 108440306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000004106	LSM	PF01423.22	4.3e-15	1	1
ENSPNAP00000004099	LSM	PF01423.22	5.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000007581	-	2188	-	ENSPNAP00000004099	143 (aa)	-	-
ENSPNAT00000007571	-	2950	XM_017719100	ENSPNAP00000004106	127 (aa)	XP_017574589	UPI0008148294

Gene Model

Click here to download ENSPNAG00000010547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000010547's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000010547	snrpd3	100	95.312	ENSPNAG00000008683	snrpd3l	100	95.312
ENSPNAG00000010547	snrpd3	58	31.325	ENSPNAG00000017824	snrpd1	56	33.803

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000010547	snrpd3	100	95.276	ENSG00000100028	SNRPD3	100	95.276	Homo_sapiens
ENSPNAG00000010547	snrpd3	100	96.063	ENSAPOG00000007512	snrpd3l	100	96.063	Acanthochromis_polyacanthus
ENSPNAG00000010547	snrpd3	100	95.276	ENSAMEG00000013935	SNRPD3	100	95.276	Ailuropoda_melanoleuca
ENSPNAG00000010547	snrpd3	100	96.063	ENSACIG00000008871	snrpd3l	100	96.063	Amphilophus_citrinellus
ENSPNAG00000010547	snrpd3	100	96.063	ENSAOCG00000016743	snrpd3l	100	96.063	Amphiprion_ocellaris
ENSPNAG00000010547	snrpd3	100	96.063	ENSAOCG00000008497	SNRPD3	100	96.063	Amphiprion_ocellaris
ENSPNAG00000010547	snrpd3	100	96.063	ENSAOCG00000022442	-	100	96.063	Amphiprion_ocellaris
ENSPNAG00000010547	snrpd3	83	96.226	ENSAOCG00000016759	-	98	96.226	Amphiprion_ocellaris
ENSPNAG00000010547	snrpd3	83	96.226	ENSAPEG00000006260	-	98	96.226	Amphiprion_percula
ENSPNAG00000010547	snrpd3	100	96.063	ENSAPEG00000006273	snrpd3l	100	96.063	Amphiprion_percula
ENSPNAG00000010547	snrpd3	100	96.063	ENSATEG00000020556	snrpd3l	91	96.094	Anabas_testudineus
ENSPNAG00000010547	snrpd3	100	95.276	ENSAPLG00000008670	SNRPD3	100	95.276	Anas_platyrhynchos
ENSPNAG00000010547	snrpd3	100	95.276	ENSANAG00000026106	SNRPD3	100	95.276	Aotus_nancymaae
ENSPNAG00000010547	snrpd3	100	96.063	ENSACLG00000021295	snrpd3l	100	96.063	Astatotilapia_calliptera
ENSPNAG00000010547	snrpd3	100	96.094	ENSAMXG00000038984	snrpd3l	100	96.094	Astyanax_mexicanus
ENSPNAG00000010547	snrpd3	100	95.276	ENSBTAG00000021262	SNRPD3	100	95.276	Bos_taurus
ENSPNAG00000010547	snrpd3	90	64.348	WBGene00004914	snr-1	63	75.294	Caenorhabditis_elegans
ENSPNAG00000010547	snrpd3	100	95.276	ENSCJAG00000009630	SNRPD3	100	95.276	Callithrix_jacchus
ENSPNAG00000010547	snrpd3	100	94.488	ENSCAFG00000017258	-	100	90.551	Canis_familiaris
ENSPNAG00000010547	snrpd3	100	95.276	ENSCAFG00000013864	-	100	95.276	Canis_familiaris
ENSPNAG00000010547	snrpd3	100	95.276	ENSCAFG00020007165	-	100	95.276	Canis_lupus_dingo
ENSPNAG00000010547	snrpd3	100	95.276	ENSCHIG00000000057	SNRPD3	100	95.276	Capra_hircus
ENSPNAG00000010547	snrpd3	100	95.276	ENSTSYG00000007649	SNRPD3	100	95.276	Carlito_syrichta
ENSPNAG00000010547	snrpd3	100	95.276	ENSCAPG00000016432	-	100	95.276	Cavia_aperea
ENSPNAG00000010547	snrpd3	100	95.276	ENSCPOG00000033102	-	100	95.276	Cavia_porcellus
ENSPNAG00000010547	snrpd3	100	95.276	ENSCCAG00000035006	SNRPD3	100	95.276	Cebus_capucinus
ENSPNAG00000010547	snrpd3	100	95.276	ENSCATG00000038878	SNRPD3	100	95.276	Cercocebus_atys
ENSPNAG00000010547	snrpd3	100	95.276	ENSCLAG00000011403	SNRPD3	100	95.276	Chinchilla_lanigera
ENSPNAG00000010547	snrpd3	100	95.276	ENSCSAG00000010694	SNRPD3	100	95.276	Chlorocebus_sabaeus
ENSPNAG00000010547	snrpd3	100	95.276	ENSCPBG00000002065	SNRPD3	100	95.276	Chrysemys_picta_bellii
ENSPNAG00000010547	snrpd3	84	78.505	ENSCSAVG00000004708	-	80	78.505	Ciona_savignyi
ENSPNAG00000010547	snrpd3	100	95.276	ENSCANG00000032106	SNRPD3	100	95.276	Colobus_angolensis_palliatus
ENSPNAG00000010547	snrpd3	100	95.276	ENSCGRG00001021990	Snrpd3	100	95.276	Cricetulus_griseus_chok1gshd
ENSPNAG00000010547	snrpd3	100	95.276	ENSCGRG00000004280	Snrpd3	100	95.276	Cricetulus_griseus_crigri
ENSPNAG00000010547	snrpd3	100	96.850	ENSCVAG00000001276	snrpd3l	100	96.850	Cyprinodon_variegatus
ENSPNAG00000010547	snrpd3	100	96.094	ENSDARG00000076283	snrpd3l	100	96.094	Danio_rerio
ENSPNAG00000010547	snrpd3	100	97.638	ENSDARG00000013800	snrpd3	100	97.638	Danio_rerio
ENSPNAG00000010547	snrpd3	100	95.276	ENSDNOG00000047424	-	100	95.276	Dasypus_novemcinctus
ENSPNAG00000010547	snrpd3	100	85.385	ENSDNOG00000018004	-	100	83.077	Dasypus_novemcinctus
ENSPNAG00000010547	snrpd3	97	73.984	ENSDNOG00000042638	-	100	71.545	Dasypus_novemcinctus
ENSPNAG00000010547	snrpd3	100	67.717	ENSDORG00000027169	-	100	66.929	Dipodomys_ordii
ENSPNAG00000010547	snrpd3	87	83.784	ENSDORG00000002800	-	100	82.883	Dipodomys_ordii
ENSPNAG00000010547	snrpd3	100	80.315	ENSDORG00000027706	-	100	77.953	Dipodomys_ordii
ENSPNAG00000010547	snrpd3	83	83.019	FBgn0023167	SmD3	71	82.243	Drosophila_melanogaster
ENSPNAG00000010547	snrpd3	100	95.276	ENSEASG00005000273	SNRPD3	100	95.276	Equus_asinus_asinus
ENSPNAG00000010547	snrpd3	100	95.276	ENSECAG00000023316	SNRPD3	100	95.276	Equus_caballus
ENSPNAG00000010547	snrpd3	100	89.764	ENSEEUG00000015518	SNRPD3	100	90.551	Erinaceus_europaeus
ENSPNAG00000010547	snrpd3	100	96.063	ENSELUG00000010092	snrpd3l	100	96.063	Esox_lucius
ENSPNAG00000010547	snrpd3	100	96.850	ENSELUG00000001854	snrpd3	100	96.850	Esox_lucius
ENSPNAG00000010547	snrpd3	100	95.276	ENSFCAG00000001512	SNRPD3	100	95.276	Felis_catus
ENSPNAG00000010547	snrpd3	100	95.276	ENSFALG00000007303	SNRPD3	100	95.276	Ficedula_albicollis
ENSPNAG00000010547	snrpd3	100	95.276	ENSFDAG00000010772	SNRPD3	100	95.276	Fukomys_damarensis
ENSPNAG00000010547	snrpd3	100	96.063	ENSFHEG00000010754	snrpd3l	100	96.063	Fundulus_heteroclitus
ENSPNAG00000010547	snrpd3	100	95.312	ENSGMOG00000008469	snrpd3l	100	95.312	Gadus_morhua
ENSPNAG00000010547	snrpd3	100	95.276	ENSGALG00000006596	SNRPD3	100	95.276	Gallus_gallus
ENSPNAG00000010547	snrpd3	83	96.226	ENSGAFG00000006661	snrpd3l	82	96.226	Gambusia_affinis
ENSPNAG00000010547	snrpd3	100	95.312	ENSGACG00000017533	snrpd3l	100	95.312	Gasterosteus_aculeatus
ENSPNAG00000010547	snrpd3	100	95.276	ENSGAGG00000023325	SNRPD3	100	95.276	Gopherus_agassizii
ENSPNAG00000010547	snrpd3	100	95.276	ENSGGOG00000015640	SNRPD3	100	95.276	Gorilla_gorilla
ENSPNAG00000010547	snrpd3	100	96.063	ENSHBUG00000001332	snrpd3l	100	96.063	Haplochromis_burtoni
ENSPNAG00000010547	snrpd3	100	95.276	ENSHGLG00000016496	SNRPD3	100	95.276	Heterocephalus_glaber_female
ENSPNAG00000010547	snrpd3	99	88.889	ENSHGLG00000009844	-	99	88.095	Heterocephalus_glaber_female
ENSPNAG00000010547	snrpd3	100	95.276	ENSHGLG00100019304	SNRPD3	100	95.276	Heterocephalus_glaber_male
ENSPNAG00000010547	snrpd3	99	88.889	ENSHGLG00100011326	-	99	88.095	Heterocephalus_glaber_male
ENSPNAG00000010547	snrpd3	100	95.276	ENSHCOG00000014396	snrpd3l	100	95.276	Hippocampus_comes
ENSPNAG00000010547	snrpd3	100	96.094	ENSIPUG00000003083	snrpd3	100	96.094	Ictalurus_punctatus
ENSPNAG00000010547	snrpd3	100	95.276	ENSSTOG00000025674	SNRPD3	100	95.276	Ictidomys_tridecemlineatus
ENSPNAG00000010547	snrpd3	100	95.276	ENSJJAG00000013303	Snrpd3	100	95.276	Jaculus_jaculus
ENSPNAG00000010547	snrpd3	100	96.063	ENSKMAG00000012493	snrpd3l	100	96.063	Kryptolebias_marmoratus
ENSPNAG00000010547	snrpd3	100	96.063	ENSLBEG00000003202	snrpd3l	100	96.063	Labrus_bergylta
ENSPNAG00000010547	snrpd3	100	94.488	ENSLACG00000015192	SNRPD3	100	90.551	Latimeria_chalumnae
ENSPNAG00000010547	snrpd3	100	96.063	ENSLOCG00000006978	snrpd3	100	96.063	Lepisosteus_oculatus
ENSPNAG00000010547	snrpd3	100	95.276	ENSLAFG00000028180	SNRPD3	100	95.276	Loxodonta_africana
ENSPNAG00000010547	snrpd3	100	95.276	ENSMFAG00000033628	SNRPD3	100	95.276	Macaca_fascicularis
ENSPNAG00000010547	snrpd3	100	95.276	ENSMMUG00000000264	SNRPD3	100	95.276	Macaca_mulatta
ENSPNAG00000010547	snrpd3	100	95.276	ENSMNEG00000020857	SNRPD3	100	95.276	Macaca_nemestrina
ENSPNAG00000010547	snrpd3	100	95.276	ENSMLEG00000037548	SNRPD3	100	95.276	Mandrillus_leucophaeus
ENSPNAG00000010547	snrpd3	100	96.063	ENSMZEG00005017664	snrpd3l	100	96.063	Maylandia_zebra
ENSPNAG00000010547	snrpd3	100	95.276	ENSMAUG00000021393	Snrpd3	100	95.276	Mesocricetus_auratus
ENSPNAG00000010547	snrpd3	100	95.276	ENSMICG00000034782	SNRPD3	100	95.276	Microcebus_murinus
ENSPNAG00000010547	snrpd3	100	95.276	ENSMOCG00000009361	Snrpd3	100	95.276	Microtus_ochrogaster
ENSPNAG00000010547	snrpd3	83	96.226	ENSMMOG00000020985	snrpd3l	67	96.226	Mola_mola
ENSPNAG00000010547	snrpd3	100	95.276	ENSMODG00000004024	SNRPD3	100	95.276	Monodelphis_domestica
ENSPNAG00000010547	snrpd3	100	96.063	ENSMALG00000013334	snrpd3l	100	96.063	Monopterus_albus
ENSPNAG00000010547	snrpd3	100	95.276	MGP_CAROLIEiJ_G0015441	Snrpd3	100	95.276	Mus_caroli
ENSPNAG00000010547	snrpd3	100	95.276	ENSMUSG00000020180	Snrpd3	100	95.276	Mus_musculus
ENSPNAG00000010547	snrpd3	100	95.276	MGP_PahariEiJ_G0030857	Snrpd3	100	95.276	Mus_pahari
ENSPNAG00000010547	snrpd3	100	95.276	MGP_SPRETEiJ_G0016254	Snrpd3	100	95.276	Mus_spretus
ENSPNAG00000010547	snrpd3	100	95.276	ENSMPUG00000002889	SNRPD3	100	95.276	Mustela_putorius_furo
ENSPNAG00000010547	snrpd3	100	95.276	ENSMLUG00000009838	SNRPD3	100	95.276	Myotis_lucifugus
ENSPNAG00000010547	snrpd3	100	95.276	ENSNGAG00000010328	Snrpd3	100	95.276	Nannospalax_galili
ENSPNAG00000010547	snrpd3	100	96.063	ENSNBRG00000020307	snrpd3l	100	96.063	Neolamprologus_brichardi
ENSPNAG00000010547	snrpd3	100	95.276	ENSNLEG00000035757	SNRPD3	100	95.276	Nomascus_leucogenys
ENSPNAG00000010547	snrpd3	100	95.276	ENSMEUG00000003772	SNRPD3	100	95.276	Notamacropus_eugenii
ENSPNAG00000010547	snrpd3	100	95.276	ENSOPRG00000005763	SNRPD3	100	95.276	Ochotona_princeps
ENSPNAG00000010547	snrpd3	100	92.126	ENSODEG00000020162	-	100	88.189	Octodon_degus
ENSPNAG00000010547	snrpd3	100	94.488	ENSODEG00000019354	-	100	90.551	Octodon_degus
ENSPNAG00000010547	snrpd3	100	95.276	ENSODEG00000008064	-	100	95.276	Octodon_degus
ENSPNAG00000010547	snrpd3	100	96.063	ENSONIG00000003828	snrpd3l	100	96.063	Oreochromis_niloticus
ENSPNAG00000010547	snrpd3	100	95.276	ENSOANG00000002463	SNRPD3	100	95.276	Ornithorhynchus_anatinus
ENSPNAG00000010547	snrpd3	100	95.276	ENSOCUG00000004845	SNRPD3	100	95.276	Oryctolagus_cuniculus
ENSPNAG00000010547	snrpd3	100	96.063	ENSORLG00000010586	snrpd3l	100	96.063	Oryzias_latipes
ENSPNAG00000010547	snrpd3	100	96.063	ENSORLG00020011769	snrpd3l	100	96.063	Oryzias_latipes_hni
ENSPNAG00000010547	snrpd3	100	96.063	ENSORLG00015022940	snrpd3l	100	96.063	Oryzias_latipes_hsok
ENSPNAG00000010547	snrpd3	100	96.063	ENSOMEG00000022734	snrpd3l	100	96.063	Oryzias_melastigma
ENSPNAG00000010547	snrpd3	100	95.276	ENSOGAG00000012708	SNRPD3	100	95.276	Otolemur_garnettii
ENSPNAG00000010547	snrpd3	100	95.276	ENSOARG00000013984	SNRPD3	100	95.276	Ovis_aries
ENSPNAG00000010547	snrpd3	100	95.276	ENSPPAG00000039191	SNRPD3	100	95.276	Pan_paniscus
ENSPNAG00000010547	snrpd3	100	95.276	ENSPPRG00000001470	SNRPD3	100	95.276	Panthera_pardus
ENSPNAG00000010547	snrpd3	100	95.276	ENSPTIG00000016610	SNRPD3	100	95.276	Panthera_tigris_altaica
ENSPNAG00000010547	snrpd3	100	95.276	ENSPTRG00000014176	SNRPD3	100	95.276	Pan_troglodytes
ENSPNAG00000010547	snrpd3	100	95.276	ENSPANG00000009279	SNRPD3	100	95.276	Papio_anubis
ENSPNAG00000010547	snrpd3	100	96.063	ENSPKIG00000006412	snrpd3l	100	96.063	Paramormyrops_kingsleyae
ENSPNAG00000010547	snrpd3	100	93.701	ENSPSIG00000010022	-	100	89.764	Pelodiscus_sinensis
ENSPNAG00000010547	snrpd3	85	95.370	ENSPMGG00000004486	snrpd3l	88	95.370	Periophthalmus_magnuspinnatus
ENSPNAG00000010547	snrpd3	100	95.276	ENSPCIG00000010910	SNRPD3	84	95.276	Phascolarctos_cinereus
ENSPNAG00000010547	snrpd3	100	96.063	ENSPFOG00000019673	snrpd3l	100	96.063	Poecilia_formosa
ENSPNAG00000010547	snrpd3	100	96.063	ENSPLAG00000023249	snrpd3l	100	96.063	Poecilia_latipinna
ENSPNAG00000010547	snrpd3	100	96.063	ENSPMEG00000008482	snrpd3l	100	96.063	Poecilia_mexicana
ENSPNAG00000010547	snrpd3	83	96.226	ENSPREG00000007532	snrpd3l	87	96.226	Poecilia_reticulata
ENSPNAG00000010547	snrpd3	100	95.276	ENSPPYG00000011648	SNRPD3	100	95.276	Pongo_abelii
ENSPNAG00000010547	snrpd3	100	95.276	ENSPCAG00000002065	SNRPD3	100	95.276	Procavia_capensis
ENSPNAG00000010547	snrpd3	100	95.276	ENSPCOG00000011842	SNRPD3	100	95.276	Propithecus_coquereli
ENSPNAG00000010547	snrpd3	100	94.488	ENSPVAG00000011405	SNRPD3	100	90.551	Pteropus_vampyrus
ENSPNAG00000010547	snrpd3	100	96.063	ENSPNYG00000013344	snrpd3l	100	96.063	Pundamilia_nyererei
ENSPNAG00000010547	snrpd3	100	95.276	ENSRNOG00000050410	Snrpd3	100	95.276	Rattus_norvegicus
ENSPNAG00000010547	snrpd3	100	95.276	ENSRBIG00000029017	SNRPD3	100	95.276	Rhinopithecus_bieti
ENSPNAG00000010547	snrpd3	100	95.276	ENSRROG00000031152	SNRPD3	100	95.276	Rhinopithecus_roxellana
ENSPNAG00000010547	snrpd3	75	48.421	YLR147C	SMD3	80	51.852	Saccharomyces_cerevisiae
ENSPNAG00000010547	snrpd3	100	93.701	ENSSFOG00015014180	snrpd3l	100	93.701	Scleropages_formosus
ENSPNAG00000010547	snrpd3	100	96.063	ENSSFOG00015007002	snrpd3l	100	96.063	Scleropages_formosus
ENSPNAG00000010547	snrpd3	100	96.063	ENSSMAG00000019307	snrpd3l	100	96.063	Scophthalmus_maximus
ENSPNAG00000010547	snrpd3	100	96.063	ENSSDUG00000006870	snrpd3l	100	96.063	Seriola_dumerili
ENSPNAG00000010547	snrpd3	100	96.063	ENSSLDG00000022664	snrpd3l	100	96.063	Seriola_lalandi_dorsalis
ENSPNAG00000010547	snrpd3	100	95.276	ENSSARG00000002357	SNRPD3	100	95.276	Sorex_araneus
ENSPNAG00000010547	snrpd3	100	94.488	ENSSPUG00000014285	SNRPD3	100	90.551	Sphenodon_punctatus
ENSPNAG00000010547	snrpd3	100	95.276	ENSSSCG00000010058	SNRPD3	100	95.276	Sus_scrofa
ENSPNAG00000010547	snrpd3	100	95.276	ENSTGUG00000010079	SNRPD3	100	95.276	Taeniopygia_guttata
ENSPNAG00000010547	snrpd3	83	96.226	ENSTRUG00000023976	snrpd3l	90	96.226	Takifugu_rubripes
ENSPNAG00000010547	snrpd3	100	96.063	ENSTNIG00000005323	snrpd3l	100	96.063	Tetraodon_nigroviridis
ENSPNAG00000010547	snrpd3	100	95.276	ENSTBEG00000014334	SNRPD3	100	95.276	Tupaia_belangeri
ENSPNAG00000010547	snrpd3	100	95.276	ENSTTRG00000006022	SNRPD3	100	95.276	Tursiops_truncatus
ENSPNAG00000010547	snrpd3	100	95.276	ENSUAMG00000010767	SNRPD3	100	95.276	Ursus_americanus
ENSPNAG00000010547	snrpd3	100	95.276	ENSUMAG00000001670	SNRPD3	100	95.276	Ursus_maritimus
ENSPNAG00000010547	snrpd3	100	95.276	ENSVPAG00000000241	SNRPD3	100	95.276	Vicugna_pacos
ENSPNAG00000010547	snrpd3	83	96.226	ENSVVUG00000019340	SNRPD3	53	96.226	Vulpes_vulpes
ENSPNAG00000010547	snrpd3	100	80.620	ENSXETG00000024918	snrpd3	100	76.744	Xenopus_tropicalis
ENSPNAG00000010547	snrpd3	100	96.063	ENSXCOG00000004795	snrpd3l	100	96.063	Xiphophorus_couchianus
ENSPNAG00000010547	snrpd3	100	96.063	ENSXMAG00000001133	snrpd3l	100	96.063	Xiphophorus_maculatus